RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
CDK7-204ENST00000506563 LOC105371045A0A1W2PR82 267 aa20.77■□□□□ 0.92
CDK7-204ENST00000506563 NUP160Q12769 1436 aa20.77■□□□□ 0.91
CDK7-204ENST00000506563 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
CDK7-204ENST00000506563 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
CDK7-204ENST00000506563 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
CDK7-204ENST00000506563 KIAA0586Q9BVV6 1533 aa20.69■□□□□ 0.9
CDK7-204ENST00000506563 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
CDK7-204ENST00000506563 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
CDK7-204ENST00000506563 JPH4Q96JJ6 628 aa20.6■□□□□ 0.89
CDK7-204ENST00000506563 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
CDK7-204ENST00000506563 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
CDK7-204ENST00000506563 UGGT2Q9NYU1 1516 aa20.53■□□□□ 0.88
CDK7-204ENST00000506563 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
CDK7-204ENST00000506563 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
CDK7-204ENST00000506563 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.87
CDK7-204ENST00000506563 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
CDK7-204ENST00000506563 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
CDK7-204ENST00000506563 KIAA0556O60303 1618 aa20.48■□□□□ 0.87
CDK7-204ENST00000506563 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
CDK7-204ENST00000506563 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
CDK7-204ENST00000506563 CLIP1P30622 1438 aa20.47■□□□□ 0.87
CDK7-204ENST00000506563 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
CDK7-204ENST00000506563 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
CDK7-204ENST00000506563 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
CDK7-204ENST00000506563 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
CDK7-204ENST00000506563 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
CDK7-204ENST00000506563 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
CDK7-204ENST00000506563 FHOD3Q2V2M9 1422 aa20.43■□□□□ 0.86
CDK7-204ENST00000506563 PTPRGP23470 1445 aa20.36■□□□□ 0.85
CDK7-204ENST00000506563 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
CDK7-204ENST00000506563 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
CDK7-204ENST00000506563 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
CDK7-204ENST00000506563 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
CDK7-204ENST00000506563 PLB1Q6P1J6 1458 aa20.25■□□□□ 0.83
CDK7-204ENST00000506563 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
CDK7-204ENST00000506563 RAPGEF6Q8TEU7 1601 aa20.22■□□□□ 0.83
CDK7-204ENST00000506563 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
CDK7-204ENST00000506563 UACAQ9BZF9 1416 aa20.21■□□□□ 0.83
CDK7-204ENST00000506563 ABCA8O94911 1581 aa20.2■□□□□ 0.82
CDK7-204ENST00000506563 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
CDK7-204ENST00000506563 ADCY10Q96PN6 1610 aa20.18■□□□□ 0.82
CDK7-204ENST00000506563 ABCC2Q92887 1545 aa20.17■□□□□ 0.82
CDK7-204ENST00000506563 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
CDK7-204ENST00000506563 CASKIN1Q8WXD9 1431 aa20.14■□□□□ 0.81
CDK7-204ENST00000506563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
CDK7-204ENST00000506563 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
CDK7-204ENST00000506563 UHRF1BP1LA0JNW5 1464 aa20.12■□□□□ 0.81
CDK7-204ENST00000506563 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
CDK7-204ENST00000506563 FYCO1Q9BQS8 1478 aa20.12■□□□□ 0.81
CDK7-204ENST00000506563 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDK7-204ENST00000506563 CDK13Q14004 1512 aaKnown RBP20.08■□□□□ 0.81
CDK7-204ENST00000506563 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
CDK7-204ENST00000506563 ZCCHC11Q5TAX3 1644 aaKnown RBP20.08■□□□□ 0.8
CDK7-204ENST00000506563 EPRSP07814 1512 aaKnown RBP20.06■□□□□ 0.8
CDK7-204ENST00000506563 ATP10BO94823 1461 aa20.05■□□□□ 0.8
CDK7-204ENST00000506563 KDM5BQ9UGL1 1544 aa20.03■□□□□ 0.8
CDK7-204ENST00000506563 APLP2Q06481 763 aa20.03■□□□□ 0.8
CDK7-204ENST00000506563 CCDC18Q5T9S5 1454 aa20.02■□□□□ 0.8
CDK7-204ENST00000506563 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
CDK7-204ENST00000506563 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
CDK7-204ENST00000506563 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
CDK7-204ENST00000506563 PLEKHD1A6NEE1 506 aa19.94■□□□□ 0.78
CDK7-204ENST00000506563 CDK11AQ9UQ88 783 aaPredicted RBP19.94■□□□□ 0.78
CDK7-204ENST00000506563 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
CDK7-204ENST00000506563 KCNH8Q96L42 1107 aa19.92■□□□□ 0.78
CDK7-204ENST00000506563 MAPKBP1O60336 1514 aa19.92■□□□□ 0.78
CDK7-204ENST00000506563 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
CDK7-204ENST00000506563 WDR7Q9Y4E6 1490 aa19.91■□□□□ 0.78
CDK7-204ENST00000506563 MAGI3Q5TCQ9 1506 aa19.91■□□□□ 0.78
CDK7-204ENST00000506563 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.77
CDK7-204ENST00000506563 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
CDK7-204ENST00000506563 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
CDK7-204ENST00000506563 TROQ12816 1431 aaPredicted RBP19.86■□□□□ 0.77
CDK7-204ENST00000506563 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
CDK7-204ENST00000506563 KIF14Q15058 1648 aa19.84■□□□□ 0.77
CDK7-204ENST00000506563 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
CDK7-204ENST00000506563 FAM69CQ0P6D2 419 aa19.8■□□□□ 0.76
CDK7-204ENST00000506563 DIP2BQ9P265 1576 aa19.79■□□□□ 0.76
CDK7-204ENST00000506563 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
CDK7-204ENST00000506563 ABCC10Q5T3U5 1492 aa19.78■□□□□ 0.76
CDK7-204ENST00000506563 TTC37Q6PGP7 1564 aa19.77■□□□□ 0.76
CDK7-204ENST00000506563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.75
CDK7-204ENST00000506563 NCOA2Q15596 1464 aa19.75■□□□□ 0.75
CDK7-204ENST00000506563 KIF13AQ9H1H9 1805 aa19.75■□□□□ 0.75
CDK7-204ENST00000506563 ABCA9Q8IUA7 1624 aa19.73■□□□□ 0.75
CDK7-204ENST00000506563 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
CDK7-204ENST00000506563 GLI2P10070 1586 aa19.71■□□□□ 0.75
CDK7-204ENST00000506563 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
CDK7-204ENST00000506563 MYO5CQ9NQX4 1742 aa19.69■□□□□ 0.74
CDK7-204ENST00000506563 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
CDK7-204ENST00000506563 MAP3K4Q9Y6R4 1608 aa19.68■□□□□ 0.74
CDK7-204ENST00000506563 CDC42BPAQ5VT25 1732 aa19.67■□□□□ 0.74
CDK7-204ENST00000506563 PHLDB1Q86UU1 1377 aa19.66■□□□□ 0.74
CDK7-204ENST00000506563 ARHGAP5Q13017 1502 aa19.65■□□□□ 0.74
CDK7-204ENST00000506563 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
CDK7-204ENST00000506563 GPATCH8Q9UKJ3 1502 aaKnown RBP19.64■□□□□ 0.73
CDK7-204ENST00000506563 PREX2Q70Z35 1606 aa19.64■□□□□ 0.73
CDK7-204ENST00000506563 ZNF777Q9ULD5 760 aaPredicted RBP19.63■□□□□ 0.73
CDK7-204ENST00000506563 CDC42BPBQ9Y5S2 1711 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms