RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
YIPF3-213ENST00000506469 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
YIPF3-213ENST00000506469 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
YIPF3-213ENST00000506469 CTTNBP2Q8WZ74 1663 aa23.1■■□□□ 1.29
YIPF3-213ENST00000506469 IQGAP2Q13576 1575 aa23.07■■□□□ 1.28
YIPF3-213ENST00000506469 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
YIPF3-213ENST00000506469 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
YIPF3-213ENST00000506469 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
YIPF3-213ENST00000506469 JPH4Q96JJ6 628 aa23■■□□□ 1.27
YIPF3-213ENST00000506469 CLIP1P30622 1438 aa22.97■■□□□ 1.27
YIPF3-213ENST00000506469 UGGT2Q9NYU1 1516 aa22.97■■□□□ 1.27
YIPF3-213ENST00000506469 SHROOM2Q13796 1616 aa22.92■■□□□ 1.26
YIPF3-213ENST00000506469 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
YIPF3-213ENST00000506469 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
YIPF3-213ENST00000506469 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
YIPF3-213ENST00000506469 P3H3Q8IVL6 736 aa22.89■■□□□ 1.25
YIPF3-213ENST00000506469 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
YIPF3-213ENST00000506469 SAMD9Q5K651 1589 aa22.88■■□□□ 1.25
YIPF3-213ENST00000506469 CARMIL2Q6F5E8 1435 aa22.87■■□□□ 1.25
YIPF3-213ENST00000506469 KIAA0556O60303 1618 aa22.84■■□□□ 1.25
YIPF3-213ENST00000506469 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
YIPF3-213ENST00000506469 ARAP1Q96P48 1450 aa22.82■■□□□ 1.24
YIPF3-213ENST00000506469 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
YIPF3-213ENST00000506469 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
YIPF3-213ENST00000506469 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
YIPF3-213ENST00000506469 PTPRGP23470 1445 aa22.7■■□□□ 1.23
YIPF3-213ENST00000506469 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
YIPF3-213ENST00000506469 VPS8Q8N3P4 1428 aa22.68■■□□□ 1.22
YIPF3-213ENST00000506469 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
YIPF3-213ENST00000506469 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
YIPF3-213ENST00000506469 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
YIPF3-213ENST00000506469 PLB1Q6P1J6 1458 aa22.6■■□□□ 1.21
YIPF3-213ENST00000506469 PCF11O94913 1555 aaKnown RBP22.58■■□□□ 1.21
YIPF3-213ENST00000506469 CASKIN1Q8WXD9 1431 aa22.58■■□□□ 1.21
YIPF3-213ENST00000506469 ATP1B4Q9UN42 357 aaPredicted RBP22.57■■□□□ 1.2
YIPF3-213ENST00000506469 ABCA8O94911 1581 aa22.56■■□□□ 1.2
YIPF3-213ENST00000506469 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
YIPF3-213ENST00000506469 FYCO1Q9BQS8 1478 aa22.55■■□□□ 1.2
YIPF3-213ENST00000506469 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
YIPF3-213ENST00000506469 DNAJC5Q9H3Z4 198 aa22.55■■□□□ 1.2
YIPF3-213ENST00000506469 HECW1Q76N89 1606 aa22.51■■□□□ 1.19
YIPF3-213ENST00000506469 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
YIPF3-213ENST00000506469 NUP153P49790 1475 aaKnown RBP22.5■■□□□ 1.19
YIPF3-213ENST00000506469 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
YIPF3-213ENST00000506469 UHRF1BP1LA0JNW5 1464 aa22.48■■□□□ 1.19
YIPF3-213ENST00000506469 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
YIPF3-213ENST00000506469 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
YIPF3-213ENST00000506469 APLP2Q06481 763 aa22.44■■□□□ 1.18
YIPF3-213ENST00000506469 ADCY10Q96PN6 1610 aa22.44■■□□□ 1.18
YIPF3-213ENST00000506469 CCDC18Q5T9S5 1454 aa22.42■■□□□ 1.18
YIPF3-213ENST00000506469 ATP10BO94823 1461 aa22.41■■□□□ 1.18
YIPF3-213ENST00000506469 CDK13Q14004 1512 aaKnown RBP22.4■■□□□ 1.18
YIPF3-213ENST00000506469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.4■■□□□ 1.18
YIPF3-213ENST00000506469 HNRNPUL2Q1KMD3 747 aaKnown RBP22.4■■□□□ 1.18
YIPF3-213ENST00000506469 LRRIQ1Q96JM4 1722 aa22.39■■□□□ 1.17
YIPF3-213ENST00000506469 MAP3K1Q13233 1512 aa22.37■■□□□ 1.17
YIPF3-213ENST00000506469 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
YIPF3-213ENST00000506469 TIAM1Q13009 1591 aa22.37■■□□□ 1.17
YIPF3-213ENST00000506469 NPM1P06748 294 aaKnown RBP eCLIP22.34■■□□□ 1.17
YIPF3-213ENST00000506469 CFAP43Q8NDM7 1665 aa22.34■■□□□ 1.17
YIPF3-213ENST00000506469 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
YIPF3-213ENST00000506469 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
YIPF3-213ENST00000506469 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
YIPF3-213ENST00000506469 CDK11AQ9UQ88 783 aaPredicted RBP22.31■■□□□ 1.16
YIPF3-213ENST00000506469 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
YIPF3-213ENST00000506469 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
YIPF3-213ENST00000506469 MTUS2Q5JR59 1369 aa22.28■■□□□ 1.16
YIPF3-213ENST00000506469 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
YIPF3-213ENST00000506469 EHBP1L1Q8N3D4 1523 aa22.23■■□□□ 1.15
YIPF3-213ENST00000506469 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
YIPF3-213ENST00000506469 ASXL2Q76L83 1435 aa22.22■■□□□ 1.15
YIPF3-213ENST00000506469 WDR7Q9Y4E6 1490 aa22.19■■□□□ 1.14
YIPF3-213ENST00000506469 MAPKBP1O60336 1514 aa22.17■■□□□ 1.14
YIPF3-213ENST00000506469 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
YIPF3-213ENST00000506469 NCOA2Q15596 1464 aa22.12■■□□□ 1.13
YIPF3-213ENST00000506469 KIF14Q15058 1648 aa22.11■■□□□ 1.13
YIPF3-213ENST00000506469 SUPT6HQ7KZ85 1726 aaKnown RBP22.11■■□□□ 1.13
YIPF3-213ENST00000506469 ABCC10Q5T3U5 1492 aa22.07■■□□□ 1.12
YIPF3-213ENST00000506469 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
YIPF3-213ENST00000506469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.12
YIPF3-213ENST00000506469 CCNB3Q8WWL7 1395 aa22.04■■□□□ 1.12
YIPF3-213ENST00000506469 TTC37Q6PGP7 1564 aa22.01■■□□□ 1.11
YIPF3-213ENST00000506469 GPATCH8Q9UKJ3 1502 aaKnown RBP21.99■■□□□ 1.11
YIPF3-213ENST00000506469 MYOM3Q5VTT5 1437 aa21.99■■□□□ 1.11
YIPF3-213ENST00000506469 ABCA9Q8IUA7 1624 aa21.99■■□□□ 1.11
YIPF3-213ENST00000506469 FAM69CQ0P6D2 419 aa21.98■■□□□ 1.11
YIPF3-213ENST00000506469 DIP2BQ9P265 1576 aa21.98■■□□□ 1.11
YIPF3-213ENST00000506469 GLI2P10070 1586 aa21.97■■□□□ 1.11
YIPF3-213ENST00000506469 PLCH2O75038 1416 aa21.94■■□□□ 1.1
YIPF3-213ENST00000506469 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
YIPF3-213ENST00000506469 FGD6Q6ZV73 1430 aa21.94■■□□□ 1.1
YIPF3-213ENST00000506469 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
YIPF3-213ENST00000506469 MIA2Q96PC5 1412 aa21.92■■□□□ 1.1
YIPF3-213ENST00000506469 ITSN2Q9NZM3 1697 aa21.92■■□□□ 1.1
YIPF3-213ENST00000506469 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
YIPF3-213ENST00000506469 CDC42BPAQ5VT25 1732 aa21.91■■□□□ 1.1
YIPF3-213ENST00000506469 RRBP1Q9P2E9 1410 aaKnown RBP21.9■■□□□ 1.1
YIPF3-213ENST00000506469 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
YIPF3-213ENST00000506469 ARHGAP5Q13017 1502 aa21.9■■□□□ 1.1
YIPF3-213ENST00000506469 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms