RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
ITGA3-208ENST00000506437 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
ITGA3-208ENST00000506437 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
ITGA3-208ENST00000506437 FHAD1B1AJZ9 1412 aa17.87■□□□□ 0.45
ITGA3-208ENST00000506437 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
ITGA3-208ENST00000506437 CUL7Q14999 1698 aa17.84■□□□□ 0.45
ITGA3-208ENST00000506437 CLIP1P30622 1438 aa17.83■□□□□ 0.44
ITGA3-208ENST00000506437 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
ITGA3-208ENST00000506437 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
ITGA3-208ENST00000506437 ARID3CA6NKF2 412 aa17.79■□□□□ 0.44
ITGA3-208ENST00000506437 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
ITGA3-208ENST00000506437 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
ITGA3-208ENST00000506437 CHD1O14646 1710 aa17.75■□□□□ 0.43
ITGA3-208ENST00000506437 CEP170Q5SW79 1584 aa17.73■□□□□ 0.43
ITGA3-208ENST00000506437 FHOD3Q2V2M9 1422 aa17.73■□□□□ 0.43
ITGA3-208ENST00000506437 ARAP1Q96P48 1450 aa17.71■□□□□ 0.42
ITGA3-208ENST00000506437 ARHGAP35Q9NRY4 1499 aa17.7■□□□□ 0.42
ITGA3-208ENST00000506437 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
ITGA3-208ENST00000506437 CTTNBP2Q8WZ74 1663 aa17.68■□□□□ 0.42
ITGA3-208ENST00000506437 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
ITGA3-208ENST00000506437 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
ITGA3-208ENST00000506437 NUP160Q12769 1436 aa17.61■□□□□ 0.41
ITGA3-208ENST00000506437 PRKCSHP14314 528 aaPredicted RBP17.6■□□□□ 0.41
ITGA3-208ENST00000506437 BCL11AQ9H165 835 aa17.6■□□□□ 0.41
ITGA3-208ENST00000506437 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
ITGA3-208ENST00000506437 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
ITGA3-208ENST00000506437 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
ITGA3-208ENST00000506437 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
ITGA3-208ENST00000506437 APLP2Q06481 763 aa17.53■□□□□ 0.4
ITGA3-208ENST00000506437 KANK4Q5T7N3 995 aaPredicted RBP17.53■□□□□ 0.4
ITGA3-208ENST00000506437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
ITGA3-208ENST00000506437 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
ITGA3-208ENST00000506437 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
ITGA3-208ENST00000506437 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
ITGA3-208ENST00000506437 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
ITGA3-208ENST00000506437 SAMD9Q5K651 1589 aa17.46■□□□□ 0.39
ITGA3-208ENST00000506437 UGGT2Q9NYU1 1516 aa17.46■□□□□ 0.39
ITGA3-208ENST00000506437 ACIN1Q9UKV3 1341 aaKnown RBP17.46■□□□□ 0.39
ITGA3-208ENST00000506437 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
ITGA3-208ENST00000506437 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
ITGA3-208ENST00000506437 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
ITGA3-208ENST00000506437 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
ITGA3-208ENST00000506437 EFCAB5A4FU69 1503 aa17.43■□□□□ 0.38
ITGA3-208ENST00000506437 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
ITGA3-208ENST00000506437 PTPRGP23470 1445 aa17.4■□□□□ 0.38
ITGA3-208ENST00000506437 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
ITGA3-208ENST00000506437 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
ITGA3-208ENST00000506437 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
ITGA3-208ENST00000506437 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.36
ITGA3-208ENST00000506437 CASKIN1Q8WXD9 1431 aa17.33■□□□□ 0.36
ITGA3-208ENST00000506437 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
ITGA3-208ENST00000506437 ITGAEP38570 1179 aa17.3■□□□□ 0.36
ITGA3-208ENST00000506437 NUP153P49790 1475 aaKnown RBP17.29■□□□□ 0.36
ITGA3-208ENST00000506437 KCNH8Q96L42 1107 aa17.28■□□□□ 0.36
ITGA3-208ENST00000506437 FYCO1Q9BQS8 1478 aa17.28■□□□□ 0.36
ITGA3-208ENST00000506437 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
ITGA3-208ENST00000506437 EPRSP07814 1512 aaKnown RBP17.26■□□□□ 0.35
ITGA3-208ENST00000506437 RAPGEF6Q8TEU7 1601 aa17.26■□□□□ 0.35
ITGA3-208ENST00000506437 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
ITGA3-208ENST00000506437 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
ITGA3-208ENST00000506437 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
ITGA3-208ENST00000506437 MAGI3Q5TCQ9 1506 aa17.24■□□□□ 0.35
ITGA3-208ENST00000506437 UACAQ9BZF9 1416 aa17.22■□□□□ 0.35
ITGA3-208ENST00000506437 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
ITGA3-208ENST00000506437 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
ITGA3-208ENST00000506437 ATP10BO94823 1461 aa17.2■□□□□ 0.34
ITGA3-208ENST00000506437 HECW1Q76N89 1606 aa17.2■□□□□ 0.34
ITGA3-208ENST00000506437 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
ITGA3-208ENST00000506437 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
ITGA3-208ENST00000506437 ABCA8O94911 1581 aa17.18■□□□□ 0.34
ITGA3-208ENST00000506437 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
ITGA3-208ENST00000506437 RIMBP3CA6NJZ7 1639 aa17.16■□□□□ 0.34
ITGA3-208ENST00000506437 RIMBP3BA6NNM3 1639 aa17.16■□□□□ 0.34
ITGA3-208ENST00000506437 RIMBP3Q9UFD9 1639 aa17.16■□□□□ 0.34
ITGA3-208ENST00000506437 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
ITGA3-208ENST00000506437 CFAP43Q8NDM7 1665 aa17.13■□□□□ 0.33
ITGA3-208ENST00000506437 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
ITGA3-208ENST00000506437 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
ITGA3-208ENST00000506437 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-208ENST00000506437 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
ITGA3-208ENST00000506437 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
ITGA3-208ENST00000506437 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
ITGA3-208ENST00000506437 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
ITGA3-208ENST00000506437 KIF14Q15058 1648 aa17.08■□□□□ 0.33
ITGA3-208ENST00000506437 ZCCHC11Q5TAX3 1644 aaKnown RBP17.05■□□□□ 0.32
ITGA3-208ENST00000506437 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
ITGA3-208ENST00000506437 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
ITGA3-208ENST00000506437 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
ITGA3-208ENST00000506437 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
ITGA3-208ENST00000506437 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
ITGA3-208ENST00000506437 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
ITGA3-208ENST00000506437 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
ITGA3-208ENST00000506437 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
ITGA3-208ENST00000506437 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
ITGA3-208ENST00000506437 ASXL2Q76L83 1435 aa17■□□□□ 0.31
ITGA3-208ENST00000506437 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
ITGA3-208ENST00000506437 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
ITGA3-208ENST00000506437 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
ITGA3-208ENST00000506437 DNAJC5Q9H3Z4 198 aa16.95■□□□□ 0.3
ITGA3-208ENST00000506437 HNRNPMP52272 730 aaKnown RBP eCLIP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms