RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
ITGA3-207ENST00000506401 FBLN2P98095 1184 aa28.21■■■□□ 2.11
ITGA3-207ENST00000506401 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.09
ITGA3-207ENST00000506401 IQGAP2Q13576 1575 aa28.1■■■□□ 2.09
ITGA3-207ENST00000506401 KIAA0586Q9BVV6 1533 aa28.09■■■□□ 2.09
ITGA3-207ENST00000506401 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
ITGA3-207ENST00000506401 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
ITGA3-207ENST00000506401 VPS8Q8N3P4 1428 aa28.07■■■□□ 2.08
ITGA3-207ENST00000506401 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
ITGA3-207ENST00000506401 CHD1O14646 1710 aa28.04■■■□□ 2.08
ITGA3-207ENST00000506401 NUP160Q12769 1436 aa28.04■■■□□ 2.08
ITGA3-207ENST00000506401 P3H3Q8IVL6 736 aa27.99■■■□□ 2.07
ITGA3-207ENST00000506401 SAMD9Q5K651 1589 aa27.98■■■□□ 2.07
ITGA3-207ENST00000506401 UGGT2Q9NYU1 1516 aa27.96■■■□□ 2.07
ITGA3-207ENST00000506401 FHOD3Q2V2M9 1422 aa27.92■■■□□ 2.06
ITGA3-207ENST00000506401 APLP2Q06481 763 aa27.88■■■□□ 2.05
ITGA3-207ENST00000506401 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
ITGA3-207ENST00000506401 FMN1Q68DA7 1419 aa27.84■■■□□ 2.05
ITGA3-207ENST00000506401 DISP1Q96F81 1524 aa27.8■■■□□ 2.04
ITGA3-207ENST00000506401 KIAA0556O60303 1618 aa27.8■■■□□ 2.04
ITGA3-207ENST00000506401 PPARGC1BQ86YN6 1023 aaKnown RBP27.79■■■□□ 2.04
ITGA3-207ENST00000506401 CARMIL2Q6F5E8 1435 aa27.78■■■□□ 2.04
ITGA3-207ENST00000506401 CASKIN1Q8WXD9 1431 aa27.74■■■□□ 2.03
ITGA3-207ENST00000506401 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
ITGA3-207ENST00000506401 FYCO1Q9BQS8 1478 aa27.73■■■□□ 2.03
ITGA3-207ENST00000506401 ATP1B4Q9UN42 357 aaPredicted RBP27.71■■■□□ 2.03
ITGA3-207ENST00000506401 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
ITGA3-207ENST00000506401 SHROOM2Q13796 1616 aa27.69■■■□□ 2.02
ITGA3-207ENST00000506401 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
ITGA3-207ENST00000506401 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
ITGA3-207ENST00000506401 MAP3K1Q13233 1512 aa27.65■■■□□ 2.02
ITGA3-207ENST00000506401 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
ITGA3-207ENST00000506401 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
ITGA3-207ENST00000506401 TIAM1Q13009 1591 aa27.6■■■□□ 2.01
ITGA3-207ENST00000506401 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
ITGA3-207ENST00000506401 HECW1Q76N89 1606 aa27.56■■■□□ 2
ITGA3-207ENST00000506401 KANK4Q5T7N3 995 aaPredicted RBP27.55■■■□□ 2
ITGA3-207ENST00000506401 PCGF6Q9BYE7 350 aa27.55■■■□□ 2
ITGA3-207ENST00000506401 RAPGEF6Q8TEU7 1601 aa27.52■■■□□ 2
ITGA3-207ENST00000506401 PTPRGP23470 1445 aa27.51■■□□□ 1.99
ITGA3-207ENST00000506401 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
ITGA3-207ENST00000506401 CCDC18Q5T9S5 1454 aa27.5■■□□□ 1.99
ITGA3-207ENST00000506401 LRRC9Q6ZRR7 1453 aa27.48■■□□□ 1.99
ITGA3-207ENST00000506401 ERCC6L2Q5T890 1561 aa27.47■■□□□ 1.99
ITGA3-207ENST00000506401 PLB1Q6P1J6 1458 aa27.45■■□□□ 1.98
ITGA3-207ENST00000506401 EPRSP07814 1512 aaKnown RBP27.45■■□□□ 1.98
ITGA3-207ENST00000506401 ABCA8O94911 1581 aa27.42■■□□□ 1.98
ITGA3-207ENST00000506401 NUP153P49790 1475 aaKnown RBP27.41■■□□□ 1.98
ITGA3-207ENST00000506401 MTUS2Q5JR59 1369 aa27.38■■□□□ 1.97
ITGA3-207ENST00000506401 CDK13Q14004 1512 aaKnown RBP27.37■■□□□ 1.97
ITGA3-207ENST00000506401 ARID3CA6NKF2 412 aa27.36■■□□□ 1.97
ITGA3-207ENST00000506401 UACAQ9BZF9 1416 aa27.34■■□□□ 1.97
ITGA3-207ENST00000506401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.33■■□□□ 1.97
ITGA3-207ENST00000506401 HNRNPUL2Q1KMD3 747 aaKnown RBP27.33■■□□□ 1.97
ITGA3-207ENST00000506401 CDK11AQ9UQ88 783 aaPredicted RBP27.32■■□□□ 1.96
ITGA3-207ENST00000506401 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
ITGA3-207ENST00000506401 SUPT6HQ7KZ85 1726 aaKnown RBP27.25■■□□□ 1.95
ITGA3-207ENST00000506401 MAGI3Q5TCQ9 1506 aa27.25■■□□□ 1.95
ITGA3-207ENST00000506401 ABCC2Q92887 1545 aa27.24■■□□□ 1.95
ITGA3-207ENST00000506401 ATP10BO94823 1461 aa27.24■■□□□ 1.95
ITGA3-207ENST00000506401 UHRF1BP1LA0JNW5 1464 aa27.21■■□□□ 1.95
ITGA3-207ENST00000506401 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
ITGA3-207ENST00000506401 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
ITGA3-207ENST00000506401 NCOA2Q15596 1464 aa27.18■■□□□ 1.94
ITGA3-207ENST00000506401 PLEKHD1A6NEE1 506 aa27.17■■□□□ 1.94
ITGA3-207ENST00000506401 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
ITGA3-207ENST00000506401 CCNB3Q8WWL7 1395 aa27.14■■□□□ 1.93
ITGA3-207ENST00000506401 ARHGEF11O15085 1522 aa27.12■■□□□ 1.93
ITGA3-207ENST00000506401 KDM5BQ9UGL1 1544 aa27.08■■□□□ 1.93
ITGA3-207ENST00000506401 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
ITGA3-207ENST00000506401 ADCY10Q96PN6 1610 aa27.07■■□□□ 1.92
ITGA3-207ENST00000506401 ZCCHC11Q5TAX3 1644 aaKnown RBP27.06■■□□□ 1.92
ITGA3-207ENST00000506401 FGD6Q6ZV73 1430 aa27.05■■□□□ 1.92
ITGA3-207ENST00000506401 KIF14Q15058 1648 aa27.01■■□□□ 1.91
ITGA3-207ENST00000506401 FAM50AQ14320 339 aaKnown RBP27.01■■□□□ 1.91
ITGA3-207ENST00000506401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.99■■□□□ 1.91
ITGA3-207ENST00000506401 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
ITGA3-207ENST00000506401 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
ITGA3-207ENST00000506401 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
ITGA3-207ENST00000506401 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
ITGA3-207ENST00000506401 MIA2Q96PC5 1412 aa26.96■■□□□ 1.91
ITGA3-207ENST00000506401 PTPN23Q9H3S7 1636 aa26.94■■□□□ 1.9
ITGA3-207ENST00000506401 ITSN2Q9NZM3 1697 aa26.92■■□□□ 1.9
ITGA3-207ENST00000506401 ABCC10Q5T3U5 1492 aa26.91■■□□□ 1.9
ITGA3-207ENST00000506401 ITGAEP38570 1179 aa26.9■■□□□ 1.9
ITGA3-207ENST00000506401 CYB5RLQ6IPT4 315 aa26.89■■□□□ 1.9
ITGA3-207ENST00000506401 GPATCH8Q9UKJ3 1502 aaKnown RBP26.89■■□□□ 1.89
ITGA3-207ENST00000506401 TCOF1Q13428 1488 aaKnown RBP26.88■■□□□ 1.89
ITGA3-207ENST00000506401 KCNH8Q96L42 1107 aa26.88■■□□□ 1.89
ITGA3-207ENST00000506401 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
ITGA3-207ENST00000506401 CDC42BPAQ5VT25 1732 aa26.85■■□□□ 1.89
ITGA3-207ENST00000506401 WDR7Q9Y4E6 1490 aa26.84■■□□□ 1.89
ITGA3-207ENST00000506401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.82■■□□□ 1.88
ITGA3-207ENST00000506401 ASXL2Q76L83 1435 aa26.81■■□□□ 1.88
ITGA3-207ENST00000506401 TTC37Q6PGP7 1564 aa26.78■■□□□ 1.88
ITGA3-207ENST00000506401 ZNF777Q9ULD5 760 aaPredicted RBP26.76■■□□□ 1.87
ITGA3-207ENST00000506401 PREX2Q70Z35 1606 aa26.76■■□□□ 1.87
ITGA3-207ENST00000506401 MYO5CQ9NQX4 1742 aa26.75■■□□□ 1.87
ITGA3-207ENST00000506401 ZNF644Q9H582 1327 aaPredicted RBP26.74■■□□□ 1.87
ITGA3-207ENST00000506401 CDC42BPBQ9Y5S2 1711 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms