RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
TRIM6-208ENST00000506134 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
TRIM6-208ENST00000506134 NUP160Q12769 1436 aa16.15■□□□□ 0.18
TRIM6-208ENST00000506134 CEP170Q5SW79 1584 aa16.15■□□□□ 0.18
TRIM6-208ENST00000506134 KIF21BO75037 1637 aa16.11■□□□□ 0.17
TRIM6-208ENST00000506134 ADRA2BP18089 450 aa16.1■□□□□ 0.17
TRIM6-208ENST00000506134 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
TRIM6-208ENST00000506134 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.16
TRIM6-208ENST00000506134 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
TRIM6-208ENST00000506134 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
TRIM6-208ENST00000506134 JPH4Q96JJ6 628 aa16.07■□□□□ 0.16
TRIM6-208ENST00000506134 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
TRIM6-208ENST00000506134 IQGAP2Q13576 1575 aa16■□□□□ 0.15
TRIM6-208ENST00000506134 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
TRIM6-208ENST00000506134 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
TRIM6-208ENST00000506134 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
TRIM6-208ENST00000506134 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
TRIM6-208ENST00000506134 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
TRIM6-208ENST00000506134 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
TRIM6-208ENST00000506134 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
TRIM6-208ENST00000506134 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
TRIM6-208ENST00000506134 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
TRIM6-208ENST00000506134 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
TRIM6-208ENST00000506134 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
TRIM6-208ENST00000506134 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
TRIM6-208ENST00000506134 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
TRIM6-208ENST00000506134 DISP1Q96F81 1524 aa15.9■□□□□ 0.14
TRIM6-208ENST00000506134 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
TRIM6-208ENST00000506134 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.13
TRIM6-208ENST00000506134 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
TRIM6-208ENST00000506134 KIAA0556O60303 1618 aa15.84■□□□□ 0.13
TRIM6-208ENST00000506134 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
TRIM6-208ENST00000506134 PTPRGP23470 1445 aa15.82■□□□□ 0.12
TRIM6-208ENST00000506134 SAMD9Q5K651 1589 aa15.82■□□□□ 0.12
TRIM6-208ENST00000506134 ARHGAP35Q9NRY4 1499 aa15.81■□□□□ 0.12
TRIM6-208ENST00000506134 CLIP1P30622 1438 aa15.81■□□□□ 0.12
TRIM6-208ENST00000506134 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
TRIM6-208ENST00000506134 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
TRIM6-208ENST00000506134 EFCAB5A4FU69 1503 aa15.78■□□□□ 0.12
TRIM6-208ENST00000506134 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
TRIM6-208ENST00000506134 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.11
TRIM6-208ENST00000506134 MSH5O43196 834 aa15.69■□□□□ 0.1
TRIM6-208ENST00000506134 ABCA8O94911 1581 aa15.67■□□□□ 0.1
TRIM6-208ENST00000506134 FMN1Q68DA7 1419 aa15.66■□□□□ 0.1
TRIM6-208ENST00000506134 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
TRIM6-208ENST00000506134 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
TRIM6-208ENST00000506134 ADCY10Q96PN6 1610 aa15.66■□□□□ 0.1
TRIM6-208ENST00000506134 UHRF1BP1LA0JNW5 1464 aa15.65■□□□□ 0.1
TRIM6-208ENST00000506134 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
TRIM6-208ENST00000506134 NPM1P06748 294 aaKnown RBP eCLIP15.63■□□□□ 0.09
TRIM6-208ENST00000506134 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
TRIM6-208ENST00000506134 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
TRIM6-208ENST00000506134 CASKIN1Q8WXD9 1431 aa15.59■□□□□ 0.09
TRIM6-208ENST00000506134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
TRIM6-208ENST00000506134 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
TRIM6-208ENST00000506134 KDM5BQ9UGL1 1544 aa15.58■□□□□ 0.09
TRIM6-208ENST00000506134 ATP10BO94823 1461 aa15.58■□□□□ 0.08
TRIM6-208ENST00000506134 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
TRIM6-208ENST00000506134 PCF11O94913 1555 aaKnown RBP15.56■□□□□ 0.08
TRIM6-208ENST00000506134 ZCCHC11Q5TAX3 1644 aaKnown RBP15.55■□□□□ 0.08
TRIM6-208ENST00000506134 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
TRIM6-208ENST00000506134 HECW1Q76N89 1606 aa15.53■□□□□ 0.08
TRIM6-208ENST00000506134 EPRSP07814 1512 aaKnown RBP15.53■□□□□ 0.08
TRIM6-208ENST00000506134 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
TRIM6-208ENST00000506134 LRRIQ1Q96JM4 1722 aa15.52■□□□□ 0.07
TRIM6-208ENST00000506134 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
TRIM6-208ENST00000506134 PLEKHD1A6NEE1 506 aa15.5■□□□□ 0.07
TRIM6-208ENST00000506134 KCNH8Q96L42 1107 aa15.49■□□□□ 0.07
TRIM6-208ENST00000506134 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
TRIM6-208ENST00000506134 CDK11AQ9UQ88 783 aaPredicted RBP15.47■□□□□ 0.07
TRIM6-208ENST00000506134 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.07
TRIM6-208ENST00000506134 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
TRIM6-208ENST00000506134 APLP2Q06481 763 aa15.45■□□□□ 0.06
TRIM6-208ENST00000506134 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
TRIM6-208ENST00000506134 WDR7Q9Y4E6 1490 aa15.44■□□□□ 0.06
TRIM6-208ENST00000506134 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
TRIM6-208ENST00000506134 ABCC10Q5T3U5 1492 aa15.41■□□□□ 0.06
TRIM6-208ENST00000506134 MAGI3Q5TCQ9 1506 aa15.41■□□□□ 0.06
TRIM6-208ENST00000506134 TIAM1Q13009 1591 aa15.4■□□□□ 0.06
TRIM6-208ENST00000506134 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
TRIM6-208ENST00000506134 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
TRIM6-208ENST00000506134 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
TRIM6-208ENST00000506134 CFAP43Q8NDM7 1665 aa15.37■□□□□ 0.05
TRIM6-208ENST00000506134 DIP2BQ9P265 1576 aa15.37■□□□□ 0.05
TRIM6-208ENST00000506134 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
TRIM6-208ENST00000506134 KIF13AQ9H1H9 1805 aa15.35■□□□□ 0.05
TRIM6-208ENST00000506134 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
TRIM6-208ENST00000506134 GLI2P10070 1586 aa15.34■□□□□ 0.05
TRIM6-208ENST00000506134 KIF14Q15058 1648 aa15.33■□□□□ 0.04
TRIM6-208ENST00000506134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIM6-208ENST00000506134 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
TRIM6-208ENST00000506134 EHBP1L1Q8N3D4 1523 aa15.3■□□□□ 0.04
TRIM6-208ENST00000506134 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
TRIM6-208ENST00000506134 TTC37Q6PGP7 1564 aa15.28■□□□□ 0.04
TRIM6-208ENST00000506134 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
TRIM6-208ENST00000506134 TSPOAP1O95153 1857 aa15.28■□□□□ 0.04
TRIM6-208ENST00000506134 NCOA2Q15596 1464 aa15.27■□□□□ 0.03
TRIM6-208ENST00000506134 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
TRIM6-208ENST00000506134 PLCH2O75038 1416 aa15.25■□□□□ 0.03
TRIM6-208ENST00000506134 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms