RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 ARAP1Q96P48 1450 aa27.81■■■□□ 2.04
MBD4-205ENST00000505883 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
MBD4-205ENST00000505883 SHROOM2Q13796 1616 aa27.69■■■□□ 2.02
MBD4-205ENST00000505883 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
MBD4-205ENST00000505883 KIAA0586Q9BVV6 1533 aa27.67■■■□□ 2.02
MBD4-205ENST00000505883 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
MBD4-205ENST00000505883 PRG4Q92954 1404 aaPredicted RBP27.64■■■□□ 2.02
MBD4-205ENST00000505883 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
MBD4-205ENST00000505883 PRXQ9BXM0 1461 aa27.55■■■□□ 2
MBD4-205ENST00000505883 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
MBD4-205ENST00000505883 EEA1Q15075 1411 aa27.5■■□□□ 1.99
MBD4-205ENST00000505883 FAM9AQ8IZU1 332 aaPredicted RBP27.48■■□□□ 1.99
MBD4-205ENST00000505883 IQGAP2Q13576 1575 aa27.47■■□□□ 1.99
MBD4-205ENST00000505883 CARMIL2Q6F5E8 1435 aa27.37■■□□□ 1.97
MBD4-205ENST00000505883 UGGT2Q9NYU1 1516 aa27.33■■□□□ 1.97
MBD4-205ENST00000505883 DISP1Q96F81 1524 aa27.31■■□□□ 1.96
MBD4-205ENST00000505883 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
MBD4-205ENST00000505883 PTPRGP23470 1445 aa27.31■■□□□ 1.96
MBD4-205ENST00000505883 TRHP20396 242 aaPredicted RBP27.3■■□□□ 1.96
MBD4-205ENST00000505883 TNIKQ9UKE5 1360 aa27.3■■□□□ 1.96
MBD4-205ENST00000505883 CTTNBP2Q8WZ74 1663 aa27.29■■□□□ 1.96
MBD4-205ENST00000505883 KIAA0556O60303 1618 aa27.2■■□□□ 1.95
MBD4-205ENST00000505883 KIF21BO75037 1637 aa27.19■■□□□ 1.94
MBD4-205ENST00000505883 ADCY10Q96PN6 1610 aa27.18■■□□□ 1.94
MBD4-205ENST00000505883 NPM1P06748 294 aaKnown RBP eCLIP27.17■■□□□ 1.94
MBD4-205ENST00000505883 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
MBD4-205ENST00000505883 EHMT2Q96KQ7 1210 aa27.15■■□□□ 1.94
MBD4-205ENST00000505883 UACAQ9BZF9 1416 aa27.1■■□□□ 1.93
MBD4-205ENST00000505883 P3H3Q8IVL6 736 aa27.09■■□□□ 1.93
MBD4-205ENST00000505883 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
MBD4-205ENST00000505883 UHRF1BP1LA0JNW5 1464 aa27.06■■□□□ 1.92
MBD4-205ENST00000505883 UBTFP17480 764 aaKnown RBP27.06■■□□□ 1.92
MBD4-205ENST00000505883 ABCC2Q92887 1545 aa27.04■■□□□ 1.92
MBD4-205ENST00000505883 MAPKBP1O60336 1514 aa27.01■■□□□ 1.91
MBD4-205ENST00000505883 PLB1Q6P1J6 1458 aa27■■□□□ 1.91
MBD4-205ENST00000505883 SAMD9Q5K651 1589 aa27■■□□□ 1.91
MBD4-205ENST00000505883 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
MBD4-205ENST00000505883 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
MBD4-205ENST00000505883 FAM69CQ0P6D2 419 aa26.93■■□□□ 1.9
MBD4-205ENST00000505883 ABCA8O94911 1581 aa26.92■■□□□ 1.9
MBD4-205ENST00000505883 FHOD3Q2V2M9 1422 aa26.9■■□□□ 1.9
MBD4-205ENST00000505883 ASXL2Q76L83 1435 aa26.9■■□□□ 1.9
MBD4-205ENST00000505883 EFCAB5A4FU69 1503 aa26.86■■□□□ 1.89
MBD4-205ENST00000505883 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
MBD4-205ENST00000505883 ZCCHC11Q5TAX3 1644 aaKnown RBP26.85■■□□□ 1.89
MBD4-205ENST00000505883 KIF13AQ9H1H9 1805 aa26.85■■□□□ 1.89
MBD4-205ENST00000505883 ARID3CA6NKF2 412 aa26.81■■□□□ 1.88
MBD4-205ENST00000505883 ARHGAP35Q9NRY4 1499 aa26.77■■□□□ 1.88
MBD4-205ENST00000505883 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
MBD4-205ENST00000505883 ATP10BO94823 1461 aa26.75■■□□□ 1.87
MBD4-205ENST00000505883 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
MBD4-205ENST00000505883 WDR7Q9Y4E6 1490 aa26.73■■□□□ 1.87
MBD4-205ENST00000505883 NUP153P49790 1475 aaKnown RBP26.7■■□□□ 1.87
MBD4-205ENST00000505883 GLI2P10070 1586 aa26.69■■□□□ 1.86
MBD4-205ENST00000505883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.67■■□□□ 1.86
MBD4-205ENST00000505883 HNRNPUL2Q1KMD3 747 aaKnown RBP26.67■■□□□ 1.86
MBD4-205ENST00000505883 KCNH8Q96L42 1107 aa26.67■■□□□ 1.86
MBD4-205ENST00000505883 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
MBD4-205ENST00000505883 CLIP1P30622 1438 aa26.6■■□□□ 1.85
MBD4-205ENST00000505883 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
MBD4-205ENST00000505883 TSPOAP1O95153 1857 aa26.59■■□□□ 1.85
MBD4-205ENST00000505883 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
MBD4-205ENST00000505883 MAP3K4Q9Y6R4 1608 aa26.55■■□□□ 1.84
MBD4-205ENST00000505883 PLEKHD1A6NEE1 506 aa26.52■■□□□ 1.84
MBD4-205ENST00000505883 PPRC1Q5VV67 1664 aaKnown RBP26.52■■□□□ 1.84
MBD4-205ENST00000505883 CDK13Q14004 1512 aaKnown RBP26.51■■□□□ 1.83
MBD4-205ENST00000505883 CD109Q6YHK3 1445 aa26.51■■□□□ 1.83
MBD4-205ENST00000505883 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
MBD4-205ENST00000505883 TEX14Q8IWB6 1497 aa26.46■■□□□ 1.83
MBD4-205ENST00000505883 CEP162Q5TB80 1403 aa26.46■■□□□ 1.83
MBD4-205ENST00000505883 CASKIN1Q8WXD9 1431 aa26.45■■□□□ 1.82
MBD4-205ENST00000505883 CFAP43Q8NDM7 1665 aa26.44■■□□□ 1.82
MBD4-205ENST00000505883 MAGI3Q5TCQ9 1506 aa26.44■■□□□ 1.82
MBD4-205ENST00000505883 KDM6BO15054 1643 aa26.43■■□□□ 1.82
MBD4-205ENST00000505883 PCF11O94913 1555 aaKnown RBP26.41■■□□□ 1.82
MBD4-205ENST00000505883 ABCA9Q8IUA7 1624 aa26.4■■□□□ 1.82
MBD4-205ENST00000505883 CDK11AQ9UQ88 783 aaPredicted RBP26.38■■□□□ 1.81
MBD4-205ENST00000505883 COL17A1Q9UMD9 1497 aaPredicted RBP26.37■■□□□ 1.81
MBD4-205ENST00000505883 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
MBD4-205ENST00000505883 LRRIQ1Q96JM4 1722 aa26.33■■□□□ 1.81
MBD4-205ENST00000505883 CCDC18Q5T9S5 1454 aa26.32■■□□□ 1.8
MBD4-205ENST00000505883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.31■■□□□ 1.82e-7■■■□□ 19.1
MBD4-205ENST00000505883 TROQ12816 1431 aaPredicted RBP26.29■■□□□ 1.8
MBD4-205ENST00000505883 TTC37Q6PGP7 1564 aa26.26■■□□□ 1.79
MBD4-205ENST00000505883 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
MBD4-205ENST00000505883 NEO1Q92859 1461 aa26.23■■□□□ 1.79
MBD4-205ENST00000505883 ARAP3Q8WWN8 1544 aa26.21■■□□□ 1.79
MBD4-205ENST00000505883 KIF14Q15058 1648 aa26.21■■□□□ 1.79
MBD4-205ENST00000505883 PLCH2O75038 1416 aa26.18■■□□□ 1.78
MBD4-205ENST00000505883 FANCAO15360 1455 aa26.17■■□□□ 1.78
MBD4-205ENST00000505883 AKNAQ7Z591 1439 aa26.14■■□□□ 1.78
MBD4-205ENST00000505883 RAPGEF3O95398 923 aa26.14■■□□□ 1.78
MBD4-205ENST00000505883 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.77
MBD4-205ENST00000505883 EFCAB2Q5VUJ9 269 aa26.1■■□□□ 1.77
MBD4-205ENST00000505883 PLPPR3Q6T4P5 718 aa26.1■■□□□ 1.77
MBD4-205ENST00000505883 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
MBD4-205ENST00000505883 CFAP74Q9C0B2 1584 aa26.08■■□□□ 1.77
MBD4-205ENST00000505883 MYO5CQ9NQX4 1742 aa26.07■■□□□ 1.76
MBD4-205ENST00000505883 DENND4BO75064 1496 aaPredicted RBP26.06■■□□□ 1.76
MBD4-205ENST00000505883 ARHGAP5Q13017 1502 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms