RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
COL4A5-208ENST00000505728 IGF1RP08069 1367 aa12.74□□□□□ -0.37
COL4A5-208ENST00000505728 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
COL4A5-208ENST00000505728 RAPGEF2Q9Y4G8 1499 aa12.73□□□□□ -0.37
COL4A5-208ENST00000505728 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
COL4A5-208ENST00000505728 TRHP20396 242 aaPredicted RBP12.7□□□□□ -0.38
COL4A5-208ENST00000505728 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
COL4A5-208ENST00000505728 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
COL4A5-208ENST00000505728 ERCC6L2Q5T890 1561 aa12.66□□□□□ -0.38
COL4A5-208ENST00000505728 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
COL4A5-208ENST00000505728 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
COL4A5-208ENST00000505728 CLIP1P30622 1438 aa12.64□□□□□ -0.39
COL4A5-208ENST00000505728 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-208ENST00000505728 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
COL4A5-208ENST00000505728 NUP160Q12769 1436 aa12.61□□□□□ -0.39
COL4A5-208ENST00000505728 CUL7Q14999 1698 aa12.61□□□□□ -0.39
COL4A5-208ENST00000505728 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
COL4A5-208ENST00000505728 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
COL4A5-208ENST00000505728 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
COL4A5-208ENST00000505728 SENP3Q9H4L4 574 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-208ENST00000505728 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
COL4A5-208ENST00000505728 RANGAP1P46060 587 aaPredicted RBP12.5□□□□□ -0.41
COL4A5-208ENST00000505728 ARHGAP35Q9NRY4 1499 aa12.48□□□□□ -0.41
COL4A5-208ENST00000505728 APLP2Q06481 763 aa12.48□□□□□ -0.41
COL4A5-208ENST00000505728 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-208ENST00000505728 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
COL4A5-208ENST00000505728 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
COL4A5-208ENST00000505728 JPH4Q96JJ6 628 aa12.43□□□□□ -0.42
COL4A5-208ENST00000505728 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
COL4A5-208ENST00000505728 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
COL4A5-208ENST00000505728 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
COL4A5-208ENST00000505728 MAPKBP1O60336 1514 aa12.36□□□□□ -0.43
COL4A5-208ENST00000505728 MAP3K1Q13233 1512 aa12.36□□□□□ -0.43
COL4A5-208ENST00000505728 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
COL4A5-208ENST00000505728 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
COL4A5-208ENST00000505728 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
COL4A5-208ENST00000505728 PHF23Q9BUL5 403 aaPredicted RBP12.33□□□□□ -0.44
COL4A5-208ENST00000505728 FMN1Q68DA7 1419 aa12.33□□□□□ -0.44
COL4A5-208ENST00000505728 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
COL4A5-208ENST00000505728 TSPOAP1O95153 1857 aa12.33□□□□□ -0.44
COL4A5-208ENST00000505728 IQGAP2Q13576 1575 aa12.32□□□□□ -0.44
COL4A5-208ENST00000505728 FHOD3Q2V2M9 1422 aa12.32□□□□□ -0.44
COL4A5-208ENST00000505728 HRCP23327 699 aa12.31□□□□□ -0.44
COL4A5-208ENST00000505728 TTBK1Q5TCY1 1321 aaPredicted RBP12.31□□□□□ -0.44
COL4A5-208ENST00000505728 CASKIN1Q8WXD9 1431 aa12.3□□□□□ -0.44
COL4A5-208ENST00000505728 FAM69CQ0P6D2 419 aa12.3□□□□□ -0.44
COL4A5-208ENST00000505728 UGGT2Q9NYU1 1516 aa12.3□□□□□ -0.44
COL4A5-208ENST00000505728 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-208ENST00000505728 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
COL4A5-208ENST00000505728 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL4A5-208ENST00000505728 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
COL4A5-208ENST00000505728 PCF11O94913 1555 aaKnown RBP12.26□□□□□ -0.45
COL4A5-208ENST00000505728 KDM6BO15054 1643 aa12.25□□□□□ -0.45
COL4A5-208ENST00000505728 PTPRGP23470 1445 aa12.24□□□□□ -0.45
COL4A5-208ENST00000505728 PPRC1Q5VV67 1664 aaKnown RBP12.23□□□□□ -0.45
COL4A5-208ENST00000505728 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
COL4A5-208ENST00000505728 DISP1Q96F81 1524 aa12.22□□□□□ -0.45
COL4A5-208ENST00000505728 LRRC9Q6ZRR7 1453 aa12.22□□□□□ -0.45
COL4A5-208ENST00000505728 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
COL4A5-208ENST00000505728 ABCC2Q92887 1545 aa12.21□□□□□ -0.45
COL4A5-208ENST00000505728 CARMIL2Q6F5E8 1435 aa12.21□□□□□ -0.45
COL4A5-208ENST00000505728 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
COL4A5-208ENST00000505728 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
COL4A5-208ENST00000505728 UHRF1BP1LA0JNW5 1464 aa12.19□□□□□ -0.46
COL4A5-208ENST00000505728 RRBP1Q9P2E9 1410 aaKnown RBP12.19□□□□□ -0.46
COL4A5-208ENST00000505728 GLI2P10070 1586 aa12.18□□□□□ -0.46
COL4A5-208ENST00000505728 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
COL4A5-208ENST00000505728 ZCCHC11Q5TAX3 1644 aaKnown RBP12.17□□□□□ -0.46
COL4A5-208ENST00000505728 UACAQ9BZF9 1416 aa12.17□□□□□ -0.46
COL4A5-208ENST00000505728 CCDC18Q5T9S5 1454 aa12.16□□□□□ -0.46
COL4A5-208ENST00000505728 HECW1Q76N89 1606 aa12.15□□□□□ -0.46
COL4A5-208ENST00000505728 PLB1Q6P1J6 1458 aa12.15□□□□□ -0.46
COL4A5-208ENST00000505728 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
COL4A5-208ENST00000505728 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.47
COL4A5-208ENST00000505728 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
COL4A5-208ENST00000505728 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
COL4A5-208ENST00000505728 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
COL4A5-208ENST00000505728 MTUS2Q5JR59 1369 aa12.13□□□□□ -0.47
COL4A5-208ENST00000505728 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
COL4A5-208ENST00000505728 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
COL4A5-208ENST00000505728 PHLDB1Q86UU1 1377 aa12.1□□□□□ -0.47
COL4A5-208ENST00000505728 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
COL4A5-208ENST00000505728 EHBP1L1Q8N3D4 1523 aa12.1□□□□□ -0.47
COL4A5-208ENST00000505728 COL17A1Q9UMD9 1497 aaPredicted RBP12.09□□□□□ -0.47
COL4A5-208ENST00000505728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.09□□□□□ -0.47
COL4A5-208ENST00000505728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-208ENST00000505728 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-208ENST00000505728 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-208ENST00000505728 ABCA8O94911 1581 aa12.07□□□□□ -0.48
COL4A5-208ENST00000505728 SUPT6HQ7KZ85 1726 aaKnown RBP12.07□□□□□ -0.48
COL4A5-208ENST00000505728 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
COL4A5-208ENST00000505728 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
COL4A5-208ENST00000505728 WDR7Q9Y4E6 1490 aa12.05□□□□□ -0.48
COL4A5-208ENST00000505728 ADGRL1O94910 1474 aa12.03□□□□□ -0.48
COL4A5-208ENST00000505728 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
COL4A5-208ENST00000505728 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
COL4A5-208ENST00000505728 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
COL4A5-208ENST00000505728 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
COL4A5-208ENST00000505728 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
COL4A5-208ENST00000505728 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms