RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
ITGA3-206ENST00000505612 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
ITGA3-206ENST00000505612 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
ITGA3-206ENST00000505612 ARAP1Q96P48 1450 aa21.89■■□□□ 1.09
ITGA3-206ENST00000505612 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
ITGA3-206ENST00000505612 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
ITGA3-206ENST00000505612 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
ITGA3-206ENST00000505612 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
ITGA3-206ENST00000505612 FAM9AQ8IZU1 332 aaPredicted RBP21.77■■□□□ 1.08
ITGA3-206ENST00000505612 IQGAP2Q13576 1575 aa21.73■■□□□ 1.07
ITGA3-206ENST00000505612 ERCC6L2Q5T890 1561 aa21.7■■□□□ 1.06
ITGA3-206ENST00000505612 NPM1P06748 294 aaKnown RBP eCLIP21.69■■□□□ 1.06
ITGA3-206ENST00000505612 PTPRGP23470 1445 aa21.69■■□□□ 1.06
ITGA3-206ENST00000505612 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
ITGA3-206ENST00000505612 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
ITGA3-206ENST00000505612 UGGT2Q9NYU1 1516 aa21.65■■□□□ 1.06
ITGA3-206ENST00000505612 GOLGA3Q08378 1498 aa21.64■■□□□ 1.05
ITGA3-206ENST00000505612 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
ITGA3-206ENST00000505612 DISP1Q96F81 1524 aa21.58■■□□□ 1.04
ITGA3-206ENST00000505612 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
ITGA3-206ENST00000505612 UBTFP17480 764 aaKnown RBP21.57■■□□□ 1.04
ITGA3-206ENST00000505612 KIF21BO75037 1637 aa21.54■■□□□ 1.04
ITGA3-206ENST00000505612 CTTNBP2Q8WZ74 1663 aa21.51■■□□□ 1.03
ITGA3-206ENST00000505612 UACAQ9BZF9 1416 aa21.5■■□□□ 1.03
ITGA3-206ENST00000505612 KIAA0556O60303 1618 aa21.47■■□□□ 1.03
ITGA3-206ENST00000505612 UHRF1BP1LA0JNW5 1464 aa21.46■■□□□ 1.03
ITGA3-206ENST00000505612 P3H3Q8IVL6 736 aa21.44■■□□□ 1.02
ITGA3-206ENST00000505612 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
ITGA3-206ENST00000505612 ABCC2Q92887 1545 aa21.42■■□□□ 1.02
ITGA3-206ENST00000505612 EHMT2Q96KQ7 1210 aa21.42■■□□□ 1.02
ITGA3-206ENST00000505612 ADCY10Q96PN6 1610 aa21.38■■□□□ 1.01
ITGA3-206ENST00000505612 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
ITGA3-206ENST00000505612 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
ITGA3-206ENST00000505612 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
ITGA3-206ENST00000505612 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
ITGA3-206ENST00000505612 PLB1Q6P1J6 1458 aa21.33■■□□□ 1.01
ITGA3-206ENST00000505612 SAMD9Q5K651 1589 aa21.32■■□□□ 1
ITGA3-206ENST00000505612 ABCC10Q5T3U5 1492 aa21.31■■□□□ 1
ITGA3-206ENST00000505612 ASXL2Q76L83 1435 aa21.28■■□□□ 1
ITGA3-206ENST00000505612 ABCA8O94911 1581 aa21.27■□□□□ 0.99
ITGA3-206ENST00000505612 FHOD3Q2V2M9 1422 aa21.26■□□□□ 0.99
ITGA3-206ENST00000505612 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
ITGA3-206ENST00000505612 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
ITGA3-206ENST00000505612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
ITGA3-206ENST00000505612 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
ITGA3-206ENST00000505612 ATP10BO94823 1461 aa21.18■□□□□ 0.98
ITGA3-206ENST00000505612 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
ITGA3-206ENST00000505612 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
ITGA3-206ENST00000505612 PLEKHD1A6NEE1 506 aa21.16■□□□□ 0.98
ITGA3-206ENST00000505612 KCNH8Q96L42 1107 aa21.16■□□□□ 0.98
ITGA3-206ENST00000505612 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
ITGA3-206ENST00000505612 CDK11AQ9UQ88 783 aaPredicted RBP21.15■□□□□ 0.98
ITGA3-206ENST00000505612 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
ITGA3-206ENST00000505612 DIP2BQ9P265 1576 aa21.14■□□□□ 0.98
ITGA3-206ENST00000505612 CLIP1P30622 1438 aa21.14■□□□□ 0.98
ITGA3-206ENST00000505612 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
ITGA3-206ENST00000505612 RAPGEF6Q8TEU7 1601 aa21.14■□□□□ 0.97
ITGA3-206ENST00000505612 GLI2P10070 1586 aa21.13■□□□□ 0.97
ITGA3-206ENST00000505612 EPRSP07814 1512 aaKnown RBP21.13■□□□□ 0.97
ITGA3-206ENST00000505612 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
ITGA3-206ENST00000505612 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
ITGA3-206ENST00000505612 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
ITGA3-206ENST00000505612 TEX14Q8IWB6 1497 aa21.03■□□□□ 0.96
ITGA3-206ENST00000505612 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
ITGA3-206ENST00000505612 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
ITGA3-206ENST00000505612 PHLDB1Q86UU1 1377 aa20.97■□□□□ 0.95
ITGA3-206ENST00000505612 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
ITGA3-206ENST00000505612 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
ITGA3-206ENST00000505612 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
ITGA3-206ENST00000505612 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
ITGA3-206ENST00000505612 MAP3K4Q9Y6R4 1608 aa20.93■□□□□ 0.94
ITGA3-206ENST00000505612 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
ITGA3-206ENST00000505612 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.94
ITGA3-206ENST00000505612 CDK13Q14004 1512 aaKnown RBP20.89■□□□□ 0.94
ITGA3-206ENST00000505612 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
ITGA3-206ENST00000505612 ABCA9Q8IUA7 1624 aa20.86■□□□□ 0.93
ITGA3-206ENST00000505612 TSPOAP1O95153 1857 aa20.86■□□□□ 0.93
ITGA3-206ENST00000505612 KDM6BO15054 1643 aa20.84■□□□□ 0.93
ITGA3-206ENST00000505612 NEO1Q92859 1461 aa20.83■□□□□ 0.93
ITGA3-206ENST00000505612 PCF11O94913 1555 aaKnown RBP20.82■□□□□ 0.92
ITGA3-206ENST00000505612 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
ITGA3-206ENST00000505612 PPRC1Q5VV67 1664 aaKnown RBP20.79■□□□□ 0.92
ITGA3-206ENST00000505612 PLCH2O75038 1416 aa20.78■□□□□ 0.92
ITGA3-206ENST00000505612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.92
ITGA3-206ENST00000505612 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
ITGA3-206ENST00000505612 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.92
ITGA3-206ENST00000505612 APLP2Q06481 763 aa20.76■□□□□ 0.91
ITGA3-206ENST00000505612 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
ITGA3-206ENST00000505612 FANCAO15360 1455 aa20.75■□□□□ 0.91
ITGA3-206ENST00000505612 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
ITGA3-206ENST00000505612 KIF14Q15058 1648 aa20.74■□□□□ 0.91
ITGA3-206ENST00000505612 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
ITGA3-206ENST00000505612 RAPGEF3O95398 923 aa20.69■□□□□ 0.9
ITGA3-206ENST00000505612 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
ITGA3-206ENST00000505612 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
ITGA3-206ENST00000505612 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
ITGA3-206ENST00000505612 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
ITGA3-206ENST00000505612 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
ITGA3-206ENST00000505612 CFDP1Q9UEE9 299 aaPredicted RBP20.64■□□□□ 0.89
ITGA3-206ENST00000505612 SCAPERQ9BY12 1400 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms