RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 ITGAEP38570 1179 aa29■■■□□ 2.23
SDHA-206ENST00000505555 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
SDHA-206ENST00000505555 ZNF316A6NFI3 1004 aaPredicted RBP28.99■■■□□ 2.23
SDHA-206ENST00000505555 FHAD1B1AJZ9 1412 aa28.98■■■□□ 2.23
SDHA-206ENST00000505555 MAP3K1Q13233 1512 aa28.97■■■□□ 2.23
SDHA-206ENST00000505555 LRRC9Q6ZRR7 1453 aa28.95■■■□□ 2.22
SDHA-206ENST00000505555 DHX57Q6P158 1386 aaKnown RBP28.94■■■□□ 2.22
SDHA-206ENST00000505555 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
SDHA-206ENST00000505555 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
SDHA-206ENST00000505555 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
SDHA-206ENST00000505555 CTTNBP2Q8WZ74 1663 aa28.88■■■□□ 2.21
SDHA-206ENST00000505555 EFCAB5A4FU69 1503 aa28.87■■■□□ 2.21
SDHA-206ENST00000505555 PHLDB1Q86UU1 1377 aa28.86■■■□□ 2.21
SDHA-206ENST00000505555 CLSPNQ9HAW4 1339 aa28.81■■■□□ 2.2
SDHA-206ENST00000505555 CFAP43Q8NDM7 1665 aa28.81■■■□□ 2.2
SDHA-206ENST00000505555 CASKIN1Q8WXD9 1431 aa28.8■■■□□ 2.2
SDHA-206ENST00000505555 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
SDHA-206ENST00000505555 FYCO1Q9BQS8 1478 aa28.79■■■□□ 2.2
SDHA-206ENST00000505555 FAM50AQ14320 339 aaKnown RBP28.77■■■□□ 2.2
SDHA-206ENST00000505555 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.191e-7■■■■■ 30.9
SDHA-206ENST00000505555 FMN1Q68DA7 1419 aa28.73■■■□□ 2.19
SDHA-206ENST00000505555 RAB3GAP2Q9H2M9 1393 aa28.71■■■□□ 2.19
SDHA-206ENST00000505555 SNAPC4Q5SXM2 1469 aa28.67■■■□□ 2.18
SDHA-206ENST00000505555 MRC2Q9UBG0 1479 aa28.67■■■□□ 2.18
SDHA-206ENST00000505555 SCAF1Q9H7N4 1312 aaKnown RBP28.67■■■□□ 2.18
SDHA-206ENST00000505555 SAMD9Q5K651 1589 aa28.66■■■□□ 2.18
SDHA-206ENST00000505555 SETD5Q9C0A6 1442 aa28.61■■■□□ 2.17
SDHA-206ENST00000505555 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
SDHA-206ENST00000505555 MTUS2Q5JR59 1369 aa28.56■■■□□ 2.16
SDHA-206ENST00000505555 NEUROD1Q13562 356 aa28.55■■■□□ 2.16
SDHA-206ENST00000505555 MIER1Q8N108 512 aa28.54■■■□□ 2.16
SDHA-206ENST00000505555 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
SDHA-206ENST00000505555 ACIN1Q9UKV3 1341 aaKnown RBP28.53■■■□□ 2.16
SDHA-206ENST00000505555 LRRIQ1Q96JM4 1722 aa28.52■■■□□ 2.16
SDHA-206ENST00000505555 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
SDHA-206ENST00000505555 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
SDHA-206ENST00000505555 MAPKBP1O60336 1514 aa28.49■■■□□ 2.15
SDHA-206ENST00000505555 FGD6Q6ZV73 1430 aa28.48■■■□□ 2.15
SDHA-206ENST00000505555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.45■■■□□ 2.14
SDHA-206ENST00000505555 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
SDHA-206ENST00000505555 IQGAP2Q13576 1575 aa28.44■■■□□ 2.14
SDHA-206ENST00000505555 WDR62O43379 1518 aa28.43■■■□□ 2.14
SDHA-206ENST00000505555 CENPBP07199 599 aaPredicted RBP28.42■■■□□ 2.14
SDHA-206ENST00000505555 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
SDHA-206ENST00000505555 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.13
SDHA-206ENST00000505555 YTHDC1Q96MU7 727 aaKnown RBP28.38■■■□□ 2.13
SDHA-206ENST00000505555 SIN3AQ96ST3 1273 aa28.38■■■□□ 2.13
SDHA-206ENST00000505555 MAGI3Q5TCQ9 1506 aa28.35■■■□□ 2.13
SDHA-206ENST00000505555 PTPRKQ15262 1439 aa28.34■■■□□ 2.13
SDHA-206ENST00000505555 ARID3CA6NKF2 412 aa28.34■■■□□ 2.13
SDHA-206ENST00000505555 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
SDHA-206ENST00000505555 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
SDHA-206ENST00000505555 EHBP1L1Q8N3D4 1523 aa28.32■■■□□ 2.12
SDHA-206ENST00000505555 SUPT6HQ7KZ85 1726 aaKnown RBP28.31■■■□□ 2.12
SDHA-206ENST00000505555 CCDC18Q5T9S5 1454 aa28.29■■■□□ 2.12
SDHA-206ENST00000505555 HECW1Q76N89 1606 aa28.26■■■□□ 2.11
SDHA-206ENST00000505555 EPRSP07814 1512 aaKnown RBP28.26■■■□□ 2.11
SDHA-206ENST00000505555 UGGT2Q9NYU1 1516 aa28.26■■■□□ 2.11
SDHA-206ENST00000505555 EIF4G3O43432 1585 aaKnown RBP28.25■■■□□ 2.11
SDHA-206ENST00000505555 CDK13Q14004 1512 aaKnown RBP28.24■■■□□ 2.11
SDHA-206ENST00000505555 ARHGEF11O15085 1522 aa28.22■■■□□ 2.11
SDHA-206ENST00000505555 KIAA0586Q9BVV6 1533 aa28.22■■■□□ 2.11
SDHA-206ENST00000505555 HFM1A2PYH4 1435 aa28.2■■■□□ 2.11
SDHA-206ENST00000505555 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
SDHA-206ENST00000505555 PTPN23Q9H3S7 1636 aa28.2■■■□□ 2.1
SDHA-206ENST00000505555 GTF3C3Q9Y5Q9 886 aa28.19■■■□□ 2.1
SDHA-206ENST00000505555 DISP1Q96F81 1524 aa28.18■■■□□ 2.1
SDHA-206ENST00000505555 NAIPQ13075 1403 aa28.15■■■□□ 2.1
SDHA-206ENST00000505555 CHMP7Q8WUX9 453 aaPredicted RBP28.14■■■□□ 2.1
SDHA-206ENST00000505555 CHIC2Q9UKJ5 165 aa28.14■■■□□ 2.1
SDHA-206ENST00000505555 FBLN2P98095 1184 aa28.14■■■□□ 2.09
SDHA-206ENST00000505555 KIAA0556O60303 1618 aa28.13■■■□□ 2.09
SDHA-206ENST00000505555 RRP7BPQ9NSQ0 103 aa28.11■■■□□ 2.09
SDHA-206ENST00000505555 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
SDHA-206ENST00000505555 TIMELESSQ9UNS1 1208 aa28.08■■■□□ 2.09
SDHA-206ENST00000505555 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.08
SDHA-206ENST00000505555 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
SDHA-206ENST00000505555 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
SDHA-206ENST00000505555 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
SDHA-206ENST00000505555 NUP153P49790 1475 aaKnown RBP28.04■■■□□ 2.08
SDHA-206ENST00000505555 SYNJ2O15056 1496 aa28.03■■■□□ 2.08
SDHA-206ENST00000505555 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
SDHA-206ENST00000505555 MIA2Q96PC5 1412 aa28■■■□□ 2.07
SDHA-206ENST00000505555 RAPGEF6Q8TEU7 1601 aa27.98■■■□□ 2.07
SDHA-206ENST00000505555 HIRIP3Q9BW71 556 aaPredicted RBP27.96■■■□□ 2.07
SDHA-206ENST00000505555 TONSLQ96HA7 1378 aa27.95■■■□□ 2.07
SDHA-206ENST00000505555 JPH4Q96JJ6 628 aa27.94■■■□□ 2.06
SDHA-206ENST00000505555 TRIM52Q96A61 297 aa27.93■■■□□ 2.06
SDHA-206ENST00000505555 ZNF644Q9H582 1327 aaPredicted RBP27.93■■■□□ 2.06
SDHA-206ENST00000505555 CDK11AQ9UQ88 783 aaPredicted RBP27.92■■■□□ 2.06
SDHA-206ENST00000505555 PLB1Q6P1J6 1458 aa27.92■■■□□ 2.06
SDHA-206ENST00000505555 KDM6BO15054 1643 aa27.91■■■□□ 2.06
SDHA-206ENST00000505555 PRG4Q92954 1404 aaPredicted RBP27.89■■■□□ 2.05
SDHA-206ENST00000505555 DDX10Q13206 875 aaKnown RBP27.88■■■□□ 2.05
SDHA-206ENST00000505555 NUP160Q12769 1436 aa27.88■■■□□ 2.05
SDHA-206ENST00000505555 GCC2Q8IWJ2 1684 aa27.87■■■□□ 2.05
SDHA-206ENST00000505555 AKNAQ7Z591 1439 aa27.86■■■□□ 2.05
SDHA-206ENST00000505555 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
SDHA-206ENST00000505555 DAPK1P53355 1430 aa27.84■■■□□ 2.05
SDHA-206ENST00000505555 DENND4BO75064 1496 aaPredicted RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms