RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 PBRM1Q86U86 1689 aa20.36■□□□□ 0.85
CCSER1-205ENST00000505073 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
CCSER1-205ENST00000505073 CTTNBP2Q8WZ74 1663 aa20.28■□□□□ 0.84
CCSER1-205ENST00000505073 APLP2Q06481 763 aa20.27■□□□□ 0.84
CCSER1-205ENST00000505073 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
CCSER1-205ENST00000505073 EIF4G3O43432 1585 aaKnown RBP20.26■□□□□ 0.83
CCSER1-205ENST00000505073 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
CCSER1-205ENST00000505073 P3H3Q8IVL6 736 aa20.26■□□□□ 0.83
CCSER1-205ENST00000505073 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.83
CCSER1-205ENST00000505073 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
CCSER1-205ENST00000505073 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
CCSER1-205ENST00000505073 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
CCSER1-205ENST00000505073 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
CCSER1-205ENST00000505073 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
CCSER1-205ENST00000505073 GRIN2AQ12879 1464 aa20.08■□□□□ 0.8
CCSER1-205ENST00000505073 SAMD9Q5K651 1589 aa20.08■□□□□ 0.8
CCSER1-205ENST00000505073 IQGAP2Q13576 1575 aa20.07■□□□□ 0.8
CCSER1-205ENST00000505073 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
CCSER1-205ENST00000505073 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
CCSER1-205ENST00000505073 FBLN2P98095 1184 aa20.06■□□□□ 0.8
CCSER1-205ENST00000505073 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
CCSER1-205ENST00000505073 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
CCSER1-205ENST00000505073 TIAM1Q13009 1591 aa20.01■□□□□ 0.79
CCSER1-205ENST00000505073 FMN1Q68DA7 1419 aa20■□□□□ 0.79
CCSER1-205ENST00000505073 KIAA0586Q9BVV6 1533 aa19.99■□□□□ 0.79
CCSER1-205ENST00000505073 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
CCSER1-205ENST00000505073 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
CCSER1-205ENST00000505073 MAP3K1Q13233 1512 aa19.97■□□□□ 0.79
CCSER1-205ENST00000505073 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
CCSER1-205ENST00000505073 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
CCSER1-205ENST00000505073 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
CCSER1-205ENST00000505073 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
CCSER1-205ENST00000505073 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
CCSER1-205ENST00000505073 NUP160Q12769 1436 aa19.9■□□□□ 0.78
CCSER1-205ENST00000505073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.89■□□□□ 0.77
CCSER1-205ENST00000505073 DISP1Q96F81 1524 aa19.89■□□□□ 0.77
CCSER1-205ENST00000505073 KIAA0556O60303 1618 aa19.87■□□□□ 0.77
CCSER1-205ENST00000505073 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
CCSER1-205ENST00000505073 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.77
CCSER1-205ENST00000505073 JPH4Q96JJ6 628 aa19.83■□□□□ 0.76
CCSER1-205ENST00000505073 CHD1O14646 1710 aa19.81■□□□□ 0.76
CCSER1-205ENST00000505073 PHLDB1Q86UU1 1377 aa19.8■□□□□ 0.76
CCSER1-205ENST00000505073 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
CCSER1-205ENST00000505073 CCNB3Q8WWL7 1395 aa19.79■□□□□ 0.76
CCSER1-205ENST00000505073 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
CCSER1-205ENST00000505073 CCER1Q8TC90 406 aaPredicted RBP19.79■□□□□ 0.76
CCSER1-205ENST00000505073 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
CCSER1-205ENST00000505073 HECW1Q76N89 1606 aa19.78■□□□□ 0.76
CCSER1-205ENST00000505073 CARMIL2Q6F5E8 1435 aa19.74■□□□□ 0.75
CCSER1-205ENST00000505073 EPRSP07814 1512 aaKnown RBP19.74■□□□□ 0.75
CCSER1-205ENST00000505073 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
CCSER1-205ENST00000505073 CDK13Q14004 1512 aaKnown RBP19.73■□□□□ 0.75
CCSER1-205ENST00000505073 ITGAEP38570 1179 aa19.72■□□□□ 0.75
CCSER1-205ENST00000505073 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
CCSER1-205ENST00000505073 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
CCSER1-205ENST00000505073 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
CCSER1-205ENST00000505073 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
CCSER1-205ENST00000505073 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
CCSER1-205ENST00000505073 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
CCSER1-205ENST00000505073 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
CCSER1-205ENST00000505073 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
CCSER1-205ENST00000505073 NCOA2Q15596 1464 aa19.66■□□□□ 0.74
CCSER1-205ENST00000505073 SUPT6HQ7KZ85 1726 aaKnown RBP19.64■□□□□ 0.73
CCSER1-205ENST00000505073 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
CCSER1-205ENST00000505073 FGD6Q6ZV73 1430 aa19.61■□□□□ 0.73
CCSER1-205ENST00000505073 MYT1Q01538 1121 aa19.59■□□□□ 0.73
CCSER1-205ENST00000505073 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
CCSER1-205ENST00000505073 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
CCSER1-205ENST00000505073 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.72
CCSER1-205ENST00000505073 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
CCSER1-205ENST00000505073 PTPRGP23470 1445 aa19.57■□□□□ 0.72
CCSER1-205ENST00000505073 GTF3C3Q9Y5Q9 886 aa19.57■□□□□ 0.72
CCSER1-205ENST00000505073 ABCA8O94911 1581 aa19.56■□□□□ 0.72
CCSER1-205ENST00000505073 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
CCSER1-205ENST00000505073 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
CCSER1-205ENST00000505073 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
CCSER1-205ENST00000505073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCSER1-205ENST00000505073 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
CCSER1-205ENST00000505073 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
CCSER1-205ENST00000505073 ATP10BO94823 1461 aa19.48■□□□□ 0.71
CCSER1-205ENST00000505073 RAB3GAP2Q9H2M9 1393 aa19.47■□□□□ 0.71
CCSER1-205ENST00000505073 DHX57Q6P158 1386 aaKnown RBP19.46■□□□□ 0.71
CCSER1-205ENST00000505073 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
CCSER1-205ENST00000505073 PTPRKQ15262 1439 aa19.45■□□□□ 0.7
CCSER1-205ENST00000505073 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
CCSER1-205ENST00000505073 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
CCSER1-205ENST00000505073 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
CCSER1-205ENST00000505073 KIF14Q15058 1648 aa19.42■□□□□ 0.7
CCSER1-205ENST00000505073 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
CCSER1-205ENST00000505073 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
CCSER1-205ENST00000505073 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
CCSER1-205ENST00000505073 CHIC2Q9UKJ5 165 aa19.35■□□□□ 0.69
CCSER1-205ENST00000505073 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
CCSER1-205ENST00000505073 GPATCH8Q9UKJ3 1502 aaKnown RBP19.34■□□□□ 0.69
CCSER1-205ENST00000505073 OSCARQ8IYS5 282 aa19.33■□□□□ 0.69
CCSER1-205ENST00000505073 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
CCSER1-205ENST00000505073 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
CCSER1-205ENST00000505073 CLSPNQ9HAW4 1339 aa19.3■□□□□ 0.68
CCSER1-205ENST00000505073 ZNF316A6NFI3 1004 aaPredicted RBP19.3■□□□□ 0.68
CCSER1-205ENST00000505073 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms