RNA–Protein interactions for RNA: ENST00000504855.1

CCNB3P1-201, Transcript of cyclin B3 pseudogene 1, humanhuman

BASIC

Gene CCNB3P1, Length 1,431 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3P1-201ENST00000504855 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
CCNB3P1-201ENST00000504855 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
CCNB3P1-201ENST00000504855 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
CCNB3P1-201ENST00000504855 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
CCNB3P1-201ENST00000504855 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
CCNB3P1-201ENST00000504855 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
CCNB3P1-201ENST00000504855 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
CCNB3P1-201ENST00000504855 CTTNBP2Q8WZ74 1663 aa19.36■□□□□ 0.69
CCNB3P1-201ENST00000504855 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
CCNB3P1-201ENST00000504855 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
CCNB3P1-201ENST00000504855 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
CCNB3P1-201ENST00000504855 CLIP1P30622 1438 aa19.29■□□□□ 0.68
CCNB3P1-201ENST00000504855 GRIN2AQ12879 1464 aa19.27■□□□□ 0.67
CCNB3P1-201ENST00000504855 EFCAB5A4FU69 1503 aa19.2■□□□□ 0.66
CCNB3P1-201ENST00000504855 IQGAP2Q13576 1575 aa19.18■□□□□ 0.66
CCNB3P1-201ENST00000504855 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
CCNB3P1-201ENST00000504855 KIAA0586Q9BVV6 1533 aa19.17■□□□□ 0.66
CCNB3P1-201ENST00000504855 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
CCNB3P1-201ENST00000504855 NUP160Q12769 1436 aa19.16■□□□□ 0.66
CCNB3P1-201ENST00000504855 CHD1O14646 1710 aa19.15■□□□□ 0.66
CCNB3P1-201ENST00000504855 SAMD9Q5K651 1589 aa19.14■□□□□ 0.65
CCNB3P1-201ENST00000504855 CEP170Q5SW79 1584 aa19.14■□□□□ 0.65
CCNB3P1-201ENST00000504855 VPS8Q8N3P4 1428 aa19.12■□□□□ 0.65
CCNB3P1-201ENST00000504855 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
CCNB3P1-201ENST00000504855 FBLN2P98095 1184 aa19.05■□□□□ 0.64
CCNB3P1-201ENST00000504855 RANGAP1P46060 587 aaPredicted RBP19.03■□□□□ 0.64
CCNB3P1-201ENST00000504855 KIAA0556O60303 1618 aa18.98■□□□□ 0.63
CCNB3P1-201ENST00000504855 FMN1Q68DA7 1419 aa18.98■□□□□ 0.63
CCNB3P1-201ENST00000504855 SHROOM2Q13796 1616 aa18.98■□□□□ 0.63
CCNB3P1-201ENST00000504855 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
CCNB3P1-201ENST00000504855 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
CCNB3P1-201ENST00000504855 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
CCNB3P1-201ENST00000504855 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
CCNB3P1-201ENST00000504855 MSH5O43196 834 aa18.92■□□□□ 0.62
CCNB3P1-201ENST00000504855 MAP3K1Q13233 1512 aa18.92■□□□□ 0.62
CCNB3P1-201ENST00000504855 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
CCNB3P1-201ENST00000504855 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
CCNB3P1-201ENST00000504855 CASKIN1Q8WXD9 1431 aa18.91■□□□□ 0.62
CCNB3P1-201ENST00000504855 PCF11O94913 1555 aaKnown RBP18.9■□□□□ 0.62
CCNB3P1-201ENST00000504855 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
CCNB3P1-201ENST00000504855 APLP2Q06481 763 aa18.85■□□□□ 0.61
CCNB3P1-201ENST00000504855 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
CCNB3P1-201ENST00000504855 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
CCNB3P1-201ENST00000504855 HECW1Q76N89 1606 aa18.82■□□□□ 0.6
CCNB3P1-201ENST00000504855 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
CCNB3P1-201ENST00000504855 ILDR1Q86SU0 546 aaPredicted RBP18.78■□□□□ 0.6
CCNB3P1-201ENST00000504855 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
CCNB3P1-201ENST00000504855 CCDC18Q5T9S5 1454 aa18.78■□□□□ 0.6
CCNB3P1-201ENST00000504855 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
CCNB3P1-201ENST00000504855 ABCA8O94911 1581 aa18.74■□□□□ 0.59
CCNB3P1-201ENST00000504855 TRIM26Q12899 539 aaPredicted RBP18.72■□□□□ 0.59
CCNB3P1-201ENST00000504855 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
CCNB3P1-201ENST00000504855 ERCC6L2Q5T890 1561 aa18.7■□□□□ 0.58
CCNB3P1-201ENST00000504855 EPRSP07814 1512 aaKnown RBP18.7■□□□□ 0.58
CCNB3P1-201ENST00000504855 PTPRGP23470 1445 aa18.7■□□□□ 0.58
CCNB3P1-201ENST00000504855 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
CCNB3P1-201ENST00000504855 PLB1Q6P1J6 1458 aa18.66■□□□□ 0.58
CCNB3P1-201ENST00000504855 EHBP1L1Q8N3D4 1523 aa18.65■□□□□ 0.58
CCNB3P1-201ENST00000504855 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
CCNB3P1-201ENST00000504855 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
CCNB3P1-201ENST00000504855 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
CCNB3P1-201ENST00000504855 UACAQ9BZF9 1416 aa18.62■□□□□ 0.57
CCNB3P1-201ENST00000504855 UHRF1BP1LA0JNW5 1464 aa18.61■□□□□ 0.57
CCNB3P1-201ENST00000504855 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
CCNB3P1-201ENST00000504855 ABCC2Q92887 1545 aa18.6■□□□□ 0.57
CCNB3P1-201ENST00000504855 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
CCNB3P1-201ENST00000504855 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.57
CCNB3P1-201ENST00000504855 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.57
CCNB3P1-201ENST00000504855 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
CCNB3P1-201ENST00000504855 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
CCNB3P1-201ENST00000504855 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
CCNB3P1-201ENST00000504855 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
CCNB3P1-201ENST00000504855 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
CCNB3P1-201ENST00000504855 ATP10BO94823 1461 aa18.55■□□□□ 0.56
CCNB3P1-201ENST00000504855 ADCY10Q96PN6 1610 aa18.53■□□□□ 0.56
CCNB3P1-201ENST00000504855 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
CCNB3P1-201ENST00000504855 TROQ12816 1431 aaPredicted RBP18.51■□□□□ 0.55
CCNB3P1-201ENST00000504855 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
CCNB3P1-201ENST00000504855 KDM5BQ9UGL1 1544 aa18.5■□□□□ 0.55
CCNB3P1-201ENST00000504855 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
CCNB3P1-201ENST00000504855 ZCCHC11Q5TAX3 1644 aaKnown RBP18.46■□□□□ 0.55
CCNB3P1-201ENST00000504855 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
CCNB3P1-201ENST00000504855 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
CCNB3P1-201ENST00000504855 KIF14Q15058 1648 aa18.44■□□□□ 0.54
CCNB3P1-201ENST00000504855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCNB3P1-201ENST00000504855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
CCNB3P1-201ENST00000504855 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
CCNB3P1-201ENST00000504855 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
CCNB3P1-201ENST00000504855 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
CCNB3P1-201ENST00000504855 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
CCNB3P1-201ENST00000504855 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
CCNB3P1-201ENST00000504855 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
CCNB3P1-201ENST00000504855 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
CCNB3P1-201ENST00000504855 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
CCNB3P1-201ENST00000504855 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
CCNB3P1-201ENST00000504855 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
CCNB3P1-201ENST00000504855 CDC42BPAQ5VT25 1732 aa18.33■□□□□ 0.53
CCNB3P1-201ENST00000504855 KDM6BO15054 1643 aa18.33■□□□□ 0.52
CCNB3P1-201ENST00000504855 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
CCNB3P1-201ENST00000504855 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms