RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 CUL7Q14999 1698 aa29.73■■■□□ 2.35
SDHA-205ENST00000504824 IGF1RP08069 1367 aa29.7■■■□□ 2.35
SDHA-205ENST00000504824 KIAA0586Q9BVV6 1533 aa29.64■■■□□ 2.34
SDHA-205ENST00000504824 NPM1P06748 294 aaKnown RBP eCLIP29.59■■■□□ 2.33
SDHA-205ENST00000504824 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
SDHA-205ENST00000504824 KIF13AQ9H1H9 1805 aa29.49■■■□□ 2.31
SDHA-205ENST00000504824 ADCY10Q96PN6 1610 aa29.44■■■□□ 2.3
SDHA-205ENST00000504824 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
SDHA-205ENST00000504824 MAPKBP1O60336 1514 aa29.43■■■□□ 2.3
SDHA-205ENST00000504824 CARMIL2Q6F5E8 1435 aa29.41■■■□□ 2.3
SDHA-205ENST00000504824 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
SDHA-205ENST00000504824 ABCC10Q5T3U5 1492 aa29.4■■■□□ 2.3
SDHA-205ENST00000504824 PTPRGP23470 1445 aa29.38■■■□□ 2.29
SDHA-205ENST00000504824 IQGAP2Q13576 1575 aa29.38■■■□□ 2.29
SDHA-205ENST00000504824 TTBK1Q5TCY1 1321 aaPredicted RBP29.36■■■□□ 2.29
SDHA-205ENST00000504824 TNIKQ9UKE5 1360 aa29.33■■■□□ 2.29
SDHA-205ENST00000504824 DIP2BQ9P265 1576 aa29.33■■■□□ 2.29
SDHA-205ENST00000504824 RAPGEF2Q9Y4G8 1499 aa29.3■■■□□ 2.28
SDHA-205ENST00000504824 ABCC2Q92887 1545 aa29.21■■■□□ 2.27
SDHA-205ENST00000504824 DISP1Q96F81 1524 aa29.17■■■□□ 2.26
SDHA-205ENST00000504824 UGGT2Q9NYU1 1516 aa29.16■■■□□ 2.26
SDHA-205ENST00000504824 TSPOAP1O95153 1857 aa29.15■■■□□ 2.26
SDHA-205ENST00000504824 UACAQ9BZF9 1416 aa29.15■■■□□ 2.26
SDHA-205ENST00000504824 UHRF1BP1LA0JNW5 1464 aa29.14■■■□□ 2.26
SDHA-205ENST00000504824 KDM6BO15054 1643 aa29.12■■■□□ 2.25
SDHA-205ENST00000504824 PLB1Q6P1J6 1458 aa29.12■■■□□ 2.25
SDHA-205ENST00000504824 KIAA0556O60303 1618 aa29.1■■■□□ 2.25
SDHA-205ENST00000504824 ASXL2Q76L83 1435 aa29.09■■■□□ 2.25
SDHA-205ENST00000504824 CTTNBP2Q8WZ74 1663 aa29.08■■■□□ 2.25
SDHA-205ENST00000504824 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
SDHA-205ENST00000504824 CSRNP3Q8WYN3 585 aa29.03■■■□□ 2.24
SDHA-205ENST00000504824 GOLGA3Q08378 1498 aa29.01■■■□□ 2.23
SDHA-205ENST00000504824 GLI2P10070 1586 aa29.01■■■□□ 2.23
SDHA-205ENST00000504824 KDM5BQ9UGL1 1544 aa29■■■□□ 2.23
SDHA-205ENST00000504824 ZCCHC11Q5TAX3 1644 aaKnown RBP28.96■■■□□ 2.23
SDHA-205ENST00000504824 EEA1Q15075 1411 aa28.92■■■□□ 2.22
SDHA-205ENST00000504824 EPRSP07814 1512 aaKnown RBP28.91■■■□□ 2.22
SDHA-205ENST00000504824 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
SDHA-205ENST00000504824 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
SDHA-205ENST00000504824 PPRC1Q5VV67 1664 aaKnown RBP28.88■■■□□ 2.21
SDHA-205ENST00000504824 TEX14Q8IWB6 1497 aa28.85■■■□□ 2.21
SDHA-205ENST00000504824 MAP3K4Q9Y6R4 1608 aa28.85■■■□□ 2.21
SDHA-205ENST00000504824 WDR7Q9Y4E6 1490 aa28.83■■■□□ 2.21
SDHA-205ENST00000504824 ABCA8O94911 1581 aa28.81■■■□□ 2.2
SDHA-205ENST00000504824 P3H3Q8IVL6 736 aa28.7■■■□□ 2.19
SDHA-205ENST00000504824 KCNH8Q96L42 1107 aa28.7■■■□□ 2.19
SDHA-205ENST00000504824 KDM4FA0A1W2PPD8 638 aa28.69■■■□□ 2.18
SDHA-205ENST00000504824 CFAP43Q8NDM7 1665 aa28.68■■■□□ 2.18
SDHA-205ENST00000504824 CD109Q6YHK3 1445 aa28.66■■■□□ 2.18
SDHA-205ENST00000504824 COL17A1Q9UMD9 1497 aaPredicted RBP28.65■■■□□ 2.18
SDHA-205ENST00000504824 MAGI3Q5TCQ9 1506 aa28.62■■■□□ 2.17
SDHA-205ENST00000504824 SAMD9Q5K651 1589 aa28.62■■■□□ 2.17
SDHA-205ENST00000504824 ARID3CA6NKF2 412 aa28.61■■■□□ 2.17
SDHA-205ENST00000504824 RANGAP1P46060 587 aaPredicted RBP28.61■■■□□ 2.17
SDHA-205ENST00000504824 KIF21BO75037 1637 aa28.61■■■□□ 2.17
SDHA-205ENST00000504824 ADGRL1O94910 1474 aa28.56■■■□□ 2.16
SDHA-205ENST00000504824 ATP10BO94823 1461 aa28.55■■■□□ 2.16
SDHA-205ENST00000504824 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
SDHA-205ENST00000504824 EHMT2Q96KQ7 1210 aa28.54■■■□□ 2.16
SDHA-205ENST00000504824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.52■■■□□ 2.16
SDHA-205ENST00000504824 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
SDHA-205ENST00000504824 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
SDHA-205ENST00000504824 FHOD3Q2V2M9 1422 aa28.44■■■□□ 2.14
SDHA-205ENST00000504824 ABCA9Q8IUA7 1624 aa28.43■■■□□ 2.14
SDHA-205ENST00000504824 EFCAB5A4FU69 1503 aa28.4■■■□□ 2.14
SDHA-205ENST00000504824 NUP153P49790 1475 aaKnown RBP28.39■■■□□ 2.14
SDHA-205ENST00000504824 PHLDB1Q86UU1 1377 aa28.39■■■□□ 2.14
SDHA-205ENST00000504824 ARAP3Q8WWN8 1544 aa28.38■■■□□ 2.13
SDHA-205ENST00000504824 PLEKHD1A6NEE1 506 aa28.32■■■□□ 2.12
SDHA-205ENST00000504824 NEO1Q92859 1461 aa28.31■■■□□ 2.12
SDHA-205ENST00000504824 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
SDHA-205ENST00000504824 RAPGEF3O95398 923 aa28.21■■■□□ 2.11
SDHA-205ENST00000504824 CFAP74Q9C0B2 1584 aa28.18■■■□□ 2.1
SDHA-205ENST00000504824 FMN1Q68DA7 1419 aa28.17■■■□□ 2.1
SDHA-205ENST00000504824 ATP1B4Q9UN42 357 aaPredicted RBP28.16■■■□□ 2.1
SDHA-205ENST00000504824 HECW2Q9P2P5 1572 aa28.15■■■□□ 2.1
SDHA-205ENST00000504824 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
SDHA-205ENST00000504824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.13■■■□□ 2.092e-7■■□□□ 12
SDHA-205ENST00000504824 FANCAO15360 1455 aa28.13■■■□□ 2.09
SDHA-205ENST00000504824 HECW1Q76N89 1606 aa28.12■■■□□ 2.09
SDHA-205ENST00000504824 DENND4BO75064 1496 aaPredicted RBP28.12■■■□□ 2.09
SDHA-205ENST00000504824 FRMPD1Q5SYB0 1578 aa28.12■■■□□ 2.09
SDHA-205ENST00000504824 AKNAQ7Z591 1439 aa28.11■■■□□ 2.09
SDHA-205ENST00000504824 TTC37Q6PGP7 1564 aa28.1■■■□□ 2.09
SDHA-205ENST00000504824 ARID4BQ4LE39 1312 aaPredicted RBP28.1■■■□□ 2.09
SDHA-205ENST00000504824 CDK11AQ9UQ88 783 aaPredicted RBP28.07■■■□□ 2.08
SDHA-205ENST00000504824 RICTORQ6R327 1708 aa28.04■■■□□ 2.08
SDHA-205ENST00000504824 ARHGEF40Q8TER5 1519 aa28.04■■■□□ 2.08
SDHA-205ENST00000504824 ADAMTSL3P82987 1691 aa28.03■■■□□ 2.08
SDHA-205ENST00000504824 BCORL1Q5H9F3 1711 aa28■■■□□ 2.07
SDHA-205ENST00000504824 PTPRMP28827 1452 aa27.99■■■□□ 2.07
SDHA-205ENST00000504824 PLCH2O75038 1416 aa27.97■■■□□ 2.07
SDHA-205ENST00000504824 ZMYM4Q5VZL5 1548 aa27.96■■■□□ 2.07
SDHA-205ENST00000504824 MYO5CQ9NQX4 1742 aa27.95■■■□□ 2.07
SDHA-205ENST00000504824 KIF14Q15058 1648 aa27.95■■■□□ 2.06
SDHA-205ENST00000504824 ZFYVE16Q7Z3T8 1539 aa27.95■■■□□ 2.06
SDHA-205ENST00000504824 CLIP1P30622 1438 aa27.95■■■□□ 2.06
SDHA-205ENST00000504824 MADDQ8WXG6 1647 aa27.93■■■□□ 2.06
SDHA-205ENST00000504824 POGZQ7Z3K3 1410 aa27.93■■■□□ 2.06
SDHA-205ENST00000504824 EFCAB2Q5VUJ9 269 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms