RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 CUL7Q14999 1698 aa39.38■■■■□ 3.89
CDC42SE2-207ENST00000504701 JPH4Q96JJ6 628 aa39.35■■■■□ 3.89
CDC42SE2-207ENST00000504701 CARMIL1Q5VZK9 1371 aa39.2■■■■□ 3.87
CDC42SE2-207ENST00000504701 KIAA0586Q9BVV6 1533 aa39.19■■■■□ 3.86
CDC42SE2-207ENST00000504701 ADCY10Q96PN6 1610 aa38.98■■■■□ 3.83
CDC42SE2-207ENST00000504701 KIF13AQ9H1H9 1805 aa38.93■■■■□ 3.82
CDC42SE2-207ENST00000504701 IQGAP2Q13576 1575 aa38.91■■■■□ 3.82
CDC42SE2-207ENST00000504701 RAPGEF2Q9Y4G8 1499 aa38.87■■■■□ 3.81
CDC42SE2-207ENST00000504701 TTBK1Q5TCY1 1321 aaPredicted RBP38.85■■■■□ 3.81
CDC42SE2-207ENST00000504701 PTPRGP23470 1445 aa38.77■■■■□ 3.8
CDC42SE2-207ENST00000504701 MAPKBP1O60336 1514 aa38.75■■■■□ 3.79
CDC42SE2-207ENST00000504701 DISP1Q96F81 1524 aa38.75■■■■□ 3.79
CDC42SE2-207ENST00000504701 CARMIL2Q6F5E8 1435 aa38.73■■■■□ 3.79
CDC42SE2-207ENST00000504701 TNIKQ9UKE5 1360 aa38.72■■■■□ 3.79
CDC42SE2-207ENST00000504701 NPM1P06748 294 aaKnown RBP eCLIP38.72■■■■□ 3.79
CDC42SE2-207ENST00000504701 ABCC10Q5T3U5 1492 aa38.69■■■■□ 3.78
CDC42SE2-207ENST00000504701 DIP2BQ9P265 1576 aa38.67■■■■□ 3.78
CDC42SE2-207ENST00000504701 UGGT2Q9NYU1 1516 aa38.67■■■■□ 3.78
CDC42SE2-207ENST00000504701 FAM69CQ0P6D2 419 aa38.64■■■■□ 3.78
CDC42SE2-207ENST00000504701 CTTNBP2Q8WZ74 1663 aa38.64■■■■□ 3.78
CDC42SE2-207ENST00000504701 KIAA0556O60303 1618 aa38.6■■■■□ 3.77
CDC42SE2-207ENST00000504701 PRXQ9BXM0 1461 aa38.59■■■■□ 3.77
CDC42SE2-207ENST00000504701 ABCC2Q92887 1545 aa38.54■■■■□ 3.76
CDC42SE2-207ENST00000504701 UACAQ9BZF9 1416 aa38.49■■■■□ 3.75
CDC42SE2-207ENST00000504701 UHRF1BP1LA0JNW5 1464 aa38.48■■■■□ 3.75
CDC42SE2-207ENST00000504701 TSPOAP1O95153 1857 aa38.47■■■■□ 3.75
CDC42SE2-207ENST00000504701 ASXL2Q76L83 1435 aa38.41■■■■□ 3.74
CDC42SE2-207ENST00000504701 ZCCHC11Q5TAX3 1644 aaKnown RBP38.35■■■■□ 3.73
CDC42SE2-207ENST00000504701 KDM5BQ9UGL1 1544 aa38.34■■■■□ 3.73
CDC42SE2-207ENST00000504701 PLB1Q6P1J6 1458 aa38.32■■■■□ 3.72
CDC42SE2-207ENST00000504701 CSRNP3Q8WYN3 585 aa38.31■■■■□ 3.72
CDC42SE2-207ENST00000504701 GOLGA3Q08378 1498 aa38.28■■■■□ 3.72
CDC42SE2-207ENST00000504701 PPRC1Q5VV67 1664 aaKnown RBP38.25■■■■□ 3.71
CDC42SE2-207ENST00000504701 KDM6BO15054 1643 aa38.23■■■■□ 3.71
CDC42SE2-207ENST00000504701 GLI2P10070 1586 aa38.23■■■■□ 3.71
CDC42SE2-207ENST00000504701 ABCA8O94911 1581 aa38.22■■■■□ 3.71
CDC42SE2-207ENST00000504701 FAM9AQ8IZU1 332 aaPredicted RBP38.19■■■■□ 3.7
CDC42SE2-207ENST00000504701 EPRSP07814 1512 aaKnown RBP38.18■■■■□ 3.7
CDC42SE2-207ENST00000504701 P3H3Q8IVL6 736 aa38.17■■■■□ 3.7
CDC42SE2-207ENST00000504701 EEA1Q15075 1411 aa38.12■■■■□ 3.69
CDC42SE2-207ENST00000504701 AEBP2Q6ZN18 517 aaPredicted RBP38.11■■■■□ 3.69
CDC42SE2-207ENST00000504701 MAP3K4Q9Y6R4 1608 aa38.1■■■■□ 3.69
CDC42SE2-207ENST00000504701 SAMD9Q5K651 1589 aa38.08■■■■□ 3.69
CDC42SE2-207ENST00000504701 WDR7Q9Y4E6 1490 aa38.07■■■■□ 3.68
CDC42SE2-207ENST00000504701 ARID3CA6NKF2 412 aa38■■■■□ 3.67
CDC42SE2-207ENST00000504701 RANGAP1P46060 587 aaPredicted RBP38■■■■□ 3.67
CDC42SE2-207ENST00000504701 CHIC1Q5VXU3 224 aa37.97■■■■□ 3.67
CDC42SE2-207ENST00000504701 KIF21BO75037 1637 aa37.94■■■■□ 3.66
CDC42SE2-207ENST00000504701 COL17A1Q9UMD9 1497 aaPredicted RBP37.94■■■■□ 3.66
CDC42SE2-207ENST00000504701 KCNH8Q96L42 1107 aa37.91■■■■□ 3.66
CDC42SE2-207ENST00000504701 ATP10BO94823 1461 aa37.89■■■■□ 3.66
CDC42SE2-207ENST00000504701 EHMT2Q96KQ7 1210 aa37.87■■■■□ 3.65
CDC42SE2-207ENST00000504701 RAPGEF6Q8TEU7 1601 aa37.87■■■■□ 3.65
CDC42SE2-207ENST00000504701 FHOD3Q2V2M9 1422 aa37.87■■■■□ 3.65
CDC42SE2-207ENST00000504701 TEX14Q8IWB6 1497 aa37.84■■■■□ 3.65
CDC42SE2-207ENST00000504701 CFAP43Q8NDM7 1665 aa37.82■■■■□ 3.65
CDC42SE2-207ENST00000504701 CD109Q6YHK3 1445 aa37.78■■■■□ 3.64
CDC42SE2-207ENST00000504701 NUP153P49790 1475 aaKnown RBP37.74■■■■□ 3.63
CDC42SE2-207ENST00000504701 KDM4FA0A1W2PPD8 638 aa37.73■■■■□ 3.63
CDC42SE2-207ENST00000504701 MAGI3Q5TCQ9 1506 aa37.72■■■■□ 3.63
CDC42SE2-207ENST00000504701 EFCAB5A4FU69 1503 aa37.66■■■■□ 3.62
CDC42SE2-207ENST00000504701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.62■■■■□ 3.61
CDC42SE2-207ENST00000504701 HNRNPUL2Q1KMD3 747 aaKnown RBP37.62■■■■□ 3.61
CDC42SE2-207ENST00000504701 ABCA9Q8IUA7 1624 aa37.61■■■■□ 3.61
CDC42SE2-207ENST00000504701 UBTFP17480 764 aaKnown RBP37.6■■■■□ 3.61
CDC42SE2-207ENST00000504701 ADGRL1O94910 1474 aa37.51■■■■□ 3.59
CDC42SE2-207ENST00000504701 ARHGAP35Q9NRY4 1499 aa37.49■■■■□ 3.59
CDC42SE2-207ENST00000504701 CDK13Q14004 1512 aaKnown RBP37.46■■■■□ 3.59
CDC42SE2-207ENST00000504701 ARAP3Q8WWN8 1544 aa37.42■■■■□ 3.58
CDC42SE2-207ENST00000504701 PLEKHD1A6NEE1 506 aa37.36■■■■□ 3.57
CDC42SE2-207ENST00000504701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.34■■■■□ 3.57
CDC42SE2-207ENST00000504701 TTC37Q6PGP7 1564 aa37.34■■■■□ 3.57
CDC42SE2-207ENST00000504701 NEO1Q92859 1461 aa37.3■■■■□ 3.56
CDC42SE2-207ENST00000504701 FRMPD1Q5SYB0 1578 aa37.29■■■■□ 3.56
CDC42SE2-207ENST00000504701 HECW1Q76N89 1606 aa37.29■■■■□ 3.56
CDC42SE2-207ENST00000504701 FMN1Q68DA7 1419 aa37.29■■■■□ 3.56
CDC42SE2-207ENST00000504701 RAPGEF3O95398 923 aa37.29■■■■□ 3.56
CDC42SE2-207ENST00000504701 ATP1B4Q9UN42 357 aaPredicted RBP37.29■■■■□ 3.56
CDC42SE2-207ENST00000504701 LRRIQ1Q96JM4 1722 aa37.26■■■■□ 3.56
CDC42SE2-207ENST00000504701 PHLDB1Q86UU1 1377 aa37.24■■■■□ 3.55
CDC42SE2-207ENST00000504701 FANCAO15360 1455 aa37.16■■■■□ 3.54
CDC42SE2-207ENST00000504701 AKNAQ7Z591 1439 aa37.14■■■■□ 3.54
CDC42SE2-207ENST00000504701 RICTORQ6R327 1708 aa37.13■■■■□ 3.54
CDC42SE2-207ENST00000504701 KIF14Q15058 1648 aa37.13■■■■□ 3.53
CDC42SE2-207ENST00000504701 PCF11O94913 1555 aaKnown RBP37.12■■■■□ 3.53
CDC42SE2-207ENST00000504701 CFAP74Q9C0B2 1584 aa37.11■■■■□ 3.53
CDC42SE2-207ENST00000504701 DENND4BO75064 1496 aaPredicted RBP37.07■■■■□ 3.53
CDC42SE2-207ENST00000504701 PLCH2O75038 1416 aa37.02■■■■□ 3.52
CDC42SE2-207ENST00000504701 MYO5CQ9NQX4 1742 aa37.02■■■■□ 3.52
CDC42SE2-207ENST00000504701 TROQ12816 1431 aaPredicted RBP37.01■■■■□ 3.51
CDC42SE2-207ENST00000504701 ARHGEF40Q8TER5 1519 aa37■■■■□ 3.51
CDC42SE2-207ENST00000504701 CASKIN1Q8WXD9 1431 aa36.99■■■■□ 3.51
CDC42SE2-207ENST00000504701 ADAMTSL3P82987 1691 aa36.96■■■■□ 3.51
CDC42SE2-207ENST00000504701 CLIP1P30622 1438 aa36.95■■■■□ 3.51
CDC42SE2-207ENST00000504701 CDK11AQ9UQ88 783 aaPredicted RBP36.95■■■■□ 3.51
CDC42SE2-207ENST00000504701 ZMYM4Q5VZL5 1548 aa36.93■■■■□ 3.5
CDC42SE2-207ENST00000504701 SIGLEC1Q9BZZ2 1709 aa36.93■■■■□ 3.5
CDC42SE2-207ENST00000504701 BCORL1Q5H9F3 1711 aa36.92■■■■□ 3.5
CDC42SE2-207ENST00000504701 SCAPERQ9BY12 1400 aa36.92■■■■□ 3.5
CDC42SE2-207ENST00000504701 HECW2Q9P2P5 1572 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms