RNA–Protein interactions for RNA: ENST00000504666.5

SIL1-205, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 2

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-205ENST00000504666 ERCC6L2Q5T890 1561 aa22.83■■□□□ 1.25
SIL1-205ENST00000504666 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
SIL1-205ENST00000504666 NUP160Q12769 1436 aa22.81■■□□□ 1.24
SIL1-205ENST00000504666 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
SIL1-205ENST00000504666 CUL7Q14999 1698 aa22.75■■□□□ 1.23
SIL1-205ENST00000504666 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
SIL1-205ENST00000504666 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
SIL1-205ENST00000504666 KIF21BO75037 1637 aa22.66■■□□□ 1.22
SIL1-205ENST00000504666 PRG4Q92954 1404 aaPredicted RBP22.65■■□□□ 1.22
SIL1-205ENST00000504666 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
SIL1-205ENST00000504666 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
SIL1-205ENST00000504666 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
SIL1-205ENST00000504666 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
SIL1-205ENST00000504666 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
SIL1-205ENST00000504666 TNIKQ9UKE5 1360 aa22.49■■□□□ 1.19
SIL1-205ENST00000504666 KIAA0586Q9BVV6 1533 aa22.47■■□□□ 1.19
SIL1-205ENST00000504666 KIF13AQ9H1H9 1805 aa22.45■■□□□ 1.19
SIL1-205ENST00000504666 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.18
SIL1-205ENST00000504666 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
SIL1-205ENST00000504666 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
SIL1-205ENST00000504666 ADCY10Q96PN6 1610 aa22.41■■□□□ 1.18
SIL1-205ENST00000504666 IQGAP2Q13576 1575 aa22.35■■□□□ 1.17
SIL1-205ENST00000504666 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
SIL1-205ENST00000504666 MAPKBP1O60336 1514 aa22.33■■□□□ 1.17
SIL1-205ENST00000504666 CTTNBP2Q8WZ74 1663 aa22.32■■□□□ 1.16
SIL1-205ENST00000504666 DIP2BQ9P265 1576 aa22.31■■□□□ 1.16
SIL1-205ENST00000504666 ABCC10Q5T3U5 1492 aa22.31■■□□□ 1.16
SIL1-205ENST00000504666 CARMIL2Q6F5E8 1435 aa22.31■■□□□ 1.16
SIL1-205ENST00000504666 PTPRGP23470 1445 aa22.29■■□□□ 1.16
SIL1-205ENST00000504666 UGGT2Q9NYU1 1516 aa22.28■■□□□ 1.16
SIL1-205ENST00000504666 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
SIL1-205ENST00000504666 CEP162Q5TB80 1403 aa22.25■■□□□ 1.15
SIL1-205ENST00000504666 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
SIL1-205ENST00000504666 CLIP1P30622 1438 aa22.24■■□□□ 1.15
SIL1-205ENST00000504666 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
SIL1-205ENST00000504666 KDM6BO15054 1643 aa22.17■■□□□ 1.14
SIL1-205ENST00000504666 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
SIL1-205ENST00000504666 ABCC2Q92887 1545 aa22.16■■□□□ 1.14
SIL1-205ENST00000504666 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
SIL1-205ENST00000504666 SAMD9Q5K651 1589 aa22.14■■□□□ 1.13
SIL1-205ENST00000504666 KIAA0556O60303 1618 aa22.13■■□□□ 1.13
SIL1-205ENST00000504666 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
SIL1-205ENST00000504666 UACAQ9BZF9 1416 aa22.12■■□□□ 1.13
SIL1-205ENST00000504666 ASXL2Q76L83 1435 aa22.11■■□□□ 1.13
SIL1-205ENST00000504666 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.12
SIL1-205ENST00000504666 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
SIL1-205ENST00000504666 UHRF1BP1LA0JNW5 1464 aa22.07■■□□□ 1.12
SIL1-205ENST00000504666 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
SIL1-205ENST00000504666 FMN1Q68DA7 1419 aa22.05■■□□□ 1.12
SIL1-205ENST00000504666 GLI2P10070 1586 aa21.99■■□□□ 1.11
SIL1-205ENST00000504666 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
SIL1-205ENST00000504666 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
SIL1-205ENST00000504666 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
SIL1-205ENST00000504666 EPRSP07814 1512 aaKnown RBP21.96■■□□□ 1.11
SIL1-205ENST00000504666 MAP3K4Q9Y6R4 1608 aa21.92■■□□□ 1.1
SIL1-205ENST00000504666 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
SIL1-205ENST00000504666 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
SIL1-205ENST00000504666 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
SIL1-205ENST00000504666 ABCA8O94911 1581 aa21.87■■□□□ 1.09
SIL1-205ENST00000504666 FYCO1Q9BQS8 1478 aa21.86■■□□□ 1.09
SIL1-205ENST00000504666 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
SIL1-205ENST00000504666 ATP1B4Q9UN42 357 aaPredicted RBP21.85■■□□□ 1.09
SIL1-205ENST00000504666 KCNH8Q96L42 1107 aa21.83■■□□□ 1.09
SIL1-205ENST00000504666 RAPGEF6Q8TEU7 1601 aa21.82■■□□□ 1.08
SIL1-205ENST00000504666 APLP2Q06481 763 aa21.81■■□□□ 1.08
SIL1-205ENST00000504666 PCF11O94913 1555 aaKnown RBP21.8■■□□□ 1.08
SIL1-205ENST00000504666 KDM4FA0A1W2PPD8 638 aa21.8■■□□□ 1.08
SIL1-205ENST00000504666 CFAP43Q8NDM7 1665 aa21.79■■□□□ 1.08
SIL1-205ENST00000504666 NUP153P49790 1475 aaKnown RBP21.79■■□□□ 1.08
SIL1-205ENST00000504666 HECW1Q76N89 1606 aa21.78■■□□□ 1.08
SIL1-205ENST00000504666 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.07
SIL1-205ENST00000504666 CD109Q6YHK3 1445 aa21.76■■□□□ 1.07
SIL1-205ENST00000504666 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
SIL1-205ENST00000504666 ADGRL1O94910 1474 aa21.75■■□□□ 1.07
SIL1-205ENST00000504666 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
SIL1-205ENST00000504666 ATP10BO94823 1461 aa21.73■■□□□ 1.07
SIL1-205ENST00000504666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
SIL1-205ENST00000504666 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
SIL1-205ENST00000504666 MAP3K1Q13233 1512 aa21.73■■□□□ 1.07
SIL1-205ENST00000504666 MAGI3Q5TCQ9 1506 aa21.7■■□□□ 1.06
SIL1-205ENST00000504666 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
SIL1-205ENST00000504666 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
SIL1-205ENST00000504666 TIAM1Q13009 1591 aa21.63■■□□□ 1.05
SIL1-205ENST00000504666 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
SIL1-205ENST00000504666 ABCA9Q8IUA7 1624 aa21.59■■□□□ 1.05
SIL1-205ENST00000504666 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
SIL1-205ENST00000504666 LRRC9Q6ZRR7 1453 aa21.58■■□□□ 1.04
SIL1-205ENST00000504666 TROQ12816 1431 aaPredicted RBP21.57■■□□□ 1.04
SIL1-205ENST00000504666 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
SIL1-205ENST00000504666 EHBP1L1Q8N3D4 1523 aa21.53■■□□□ 1.04
SIL1-205ENST00000504666 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
SIL1-205ENST00000504666 HECW2Q9P2P5 1572 aa21.46■■□□□ 1.03
SIL1-205ENST00000504666 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
SIL1-205ENST00000504666 NEO1Q92859 1461 aa21.45■■□□□ 1.03
SIL1-205ENST00000504666 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
SIL1-205ENST00000504666 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
SIL1-205ENST00000504666 CFAP74Q9C0B2 1584 aa21.43■■□□□ 1.02
SIL1-205ENST00000504666 KIF14Q15058 1648 aa21.42■■□□□ 1.02
SIL1-205ENST00000504666 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
SIL1-205ENST00000504666 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms