RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 IQGAP2Q13576 1575 aa22.9■■□□□ 1.26
DDR1-253ENST00000504651 KIAA0586Q9BVV6 1533 aa22.9■■□□□ 1.26
DDR1-253ENST00000504651 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
DDR1-253ENST00000504651 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
DDR1-253ENST00000504651 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
DDR1-253ENST00000504651 UGGT2Q9NYU1 1516 aa22.75■■□□□ 1.23
DDR1-253ENST00000504651 ARHGEF11O15085 1522 aa22.74■■□□□ 1.23
DDR1-253ENST00000504651 RIMBP3CA6NJZ7 1639 aa22.74■■□□□ 1.23
DDR1-253ENST00000504651 RIMBP3BA6NNM3 1639 aa22.74■■□□□ 1.23
DDR1-253ENST00000504651 RIMBP3Q9UFD9 1639 aa22.74■■□□□ 1.23
DDR1-253ENST00000504651 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
DDR1-253ENST00000504651 PRG4Q92954 1404 aaPredicted RBP22.72■■□□□ 1.23
DDR1-253ENST00000504651 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
DDR1-253ENST00000504651 KIAA0556O60303 1618 aa22.69■■□□□ 1.22
DDR1-253ENST00000504651 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
DDR1-253ENST00000504651 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
DDR1-253ENST00000504651 SAMD9Q5K651 1589 aa22.66■■□□□ 1.22
DDR1-253ENST00000504651 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
DDR1-253ENST00000504651 CARMIL2Q6F5E8 1435 aa22.65■■□□□ 1.22
DDR1-253ENST00000504651 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
DDR1-253ENST00000504651 EFCAB5A4FU69 1503 aa22.63■■□□□ 1.21
DDR1-253ENST00000504651 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
DDR1-253ENST00000504651 ARAP1Q96P48 1450 aa22.58■■□□□ 1.2
DDR1-253ENST00000504651 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
DDR1-253ENST00000504651 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
DDR1-253ENST00000504651 CLIP1P30622 1438 aa22.52■■□□□ 1.2
DDR1-253ENST00000504651 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
DDR1-253ENST00000504651 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
DDR1-253ENST00000504651 PTPRGP23470 1445 aa22.48■■□□□ 1.19
DDR1-253ENST00000504651 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
DDR1-253ENST00000504651 CYB5RLQ6IPT4 315 aa22.41■■□□□ 1.18
DDR1-253ENST00000504651 ABCA8O94911 1581 aa22.38■■□□□ 1.17
DDR1-253ENST00000504651 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
DDR1-253ENST00000504651 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
DDR1-253ENST00000504651 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
DDR1-253ENST00000504651 ABCC2Q92887 1545 aa22.36■■□□□ 1.17
DDR1-253ENST00000504651 PLB1Q6P1J6 1458 aa22.36■■□□□ 1.17
DDR1-253ENST00000504651 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
DDR1-253ENST00000504651 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
DDR1-253ENST00000504651 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
DDR1-253ENST00000504651 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
DDR1-253ENST00000504651 ZCCHC11Q5TAX3 1644 aaKnown RBP22.25■■□□□ 1.15
DDR1-253ENST00000504651 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
DDR1-253ENST00000504651 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
DDR1-253ENST00000504651 NUP153P49790 1475 aaKnown RBP22.23■■□□□ 1.15
DDR1-253ENST00000504651 CASKIN1Q8WXD9 1431 aa22.23■■□□□ 1.15
DDR1-253ENST00000504651 LRRIQ1Q96JM4 1722 aa22.22■■□□□ 1.15
DDR1-253ENST00000504651 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
DDR1-253ENST00000504651 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
DDR1-253ENST00000504651 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
DDR1-253ENST00000504651 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
DDR1-253ENST00000504651 ARID3CA6NKF2 412 aa22.15■■□□□ 1.14
DDR1-253ENST00000504651 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
DDR1-253ENST00000504651 ATP10BO94823 1461 aa22.15■■□□□ 1.14
DDR1-253ENST00000504651 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
DDR1-253ENST00000504651 MAPKBP1O60336 1514 aa22.14■■□□□ 1.13
DDR1-253ENST00000504651 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
DDR1-253ENST00000504651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
DDR1-253ENST00000504651 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
DDR1-253ENST00000504651 ASXL2Q76L83 1435 aa22.07■■□□□ 1.12
DDR1-253ENST00000504651 WDR7Q9Y4E6 1490 aa22.05■■□□□ 1.12
DDR1-253ENST00000504651 TIAM1Q13009 1591 aa22.04■■□□□ 1.12
DDR1-253ENST00000504651 DIP2BQ9P265 1576 aa22■■□□□ 1.11
DDR1-253ENST00000504651 MAP3K1Q13233 1512 aa21.98■■□□□ 1.11
DDR1-253ENST00000504651 KIF13AQ9H1H9 1805 aa21.97■■□□□ 1.11
DDR1-253ENST00000504651 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
DDR1-253ENST00000504651 CDK11AQ9UQ88 783 aaPredicted RBP21.97■■□□□ 1.11
DDR1-253ENST00000504651 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
DDR1-253ENST00000504651 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
DDR1-253ENST00000504651 KIF14Q15058 1648 aa21.95■■□□□ 1.1
DDR1-253ENST00000504651 PLEKHD1A6NEE1 506 aa21.95■■□□□ 1.1
DDR1-253ENST00000504651 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
DDR1-253ENST00000504651 APLP2Q06481 763 aa21.94■■□□□ 1.1
DDR1-253ENST00000504651 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
DDR1-253ENST00000504651 GLI2P10070 1586 aa21.91■■□□□ 1.1
DDR1-253ENST00000504651 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.09
DDR1-253ENST00000504651 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
DDR1-253ENST00000504651 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.09
DDR1-253ENST00000504651 SUPT6HQ7KZ85 1726 aaKnown RBP21.88■■□□□ 1.09
DDR1-253ENST00000504651 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
DDR1-253ENST00000504651 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
DDR1-253ENST00000504651 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.86■■□□□ 1.096e-7■■■■□ 21.9
DDR1-253ENST00000504651 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
DDR1-253ENST00000504651 FAM69CQ0P6D2 419 aa21.84■■□□□ 1.09
DDR1-253ENST00000504651 MYO5CQ9NQX4 1742 aa21.83■■□□□ 1.08
DDR1-253ENST00000504651 TSPOAP1O95153 1857 aa21.82■■□□□ 1.08
DDR1-253ENST00000504651 KANK4Q5T7N3 995 aaPredicted RBP21.8■■□□□ 1.08
DDR1-253ENST00000504651 PPRC1Q5VV67 1664 aaKnown RBP21.78■■□□□ 1.08
DDR1-253ENST00000504651 ITSN2Q9NZM3 1697 aa21.78■■□□□ 1.08
DDR1-253ENST00000504651 CDC42BPAQ5VT25 1732 aa21.77■■□□□ 1.08
DDR1-253ENST00000504651 NCOA2Q15596 1464 aa21.77■■□□□ 1.08
DDR1-253ENST00000504651 PREX2Q70Z35 1606 aa21.77■■□□□ 1.08
DDR1-253ENST00000504651 CD109Q6YHK3 1445 aa21.76■■□□□ 1.07
DDR1-253ENST00000504651 CFAP74Q9C0B2 1584 aa21.73■■□□□ 1.07
DDR1-253ENST00000504651 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
DDR1-253ENST00000504651 CCNB3Q8WWL7 1395 aa21.71■■□□□ 1.07
DDR1-253ENST00000504651 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
DDR1-253ENST00000504651 ARAP3Q8WWN8 1544 aa21.7■■□□□ 1.07
DDR1-253ENST00000504651 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
DDR1-253ENST00000504651 PLCH2O75038 1416 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms