RNA–Protein interactions for RNA: ENST00000504612.5

ATP2C1-207, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2C1, Length 3,148 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-207ENST00000504612 NESP48681 1621 aa8.11□□□□□ -1.11
ATP2C1-207ENST00000504612 BAZ1BQ9UIG0 1483 aaKnown RBP8.1□□□□□ -1.11
ATP2C1-207ENST00000504612 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
ATP2C1-207ENST00000504612 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.09□□□□□ -1.11
ATP2C1-207ENST00000504612 TTBK1Q5TCY1 1321 aaPredicted RBP8.08□□□□□ -1.12
ATP2C1-207ENST00000504612 BBXQ8WY36 941 aaPredicted RBP8.07□□□□□ -1.12
ATP2C1-207ENST00000504612 ARID3AQ99856 593 aa8.07□□□□□ -1.12
ATP2C1-207ENST00000504612 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
ATP2C1-207ENST00000504612 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
ATP2C1-207ENST00000504612 FBXO3Q9UK99 471 aa8.05□□□□□ -1.12
ATP2C1-207ENST00000504612 MROH2BQ7Z745 1585 aa8.04□□□□□ -1.12
ATP2C1-207ENST00000504612 ATF5Q9Y2D1 282 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-207ENST00000504612 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
ATP2C1-207ENST00000504612 MRC2Q9UBG0 1479 aa8.03□□□□□ -1.12
ATP2C1-207ENST00000504612 VASPP50552 380 aaPredicted RBP8.02□□□□□ -1.13
ATP2C1-207ENST00000504612 ACIN1Q9UKV3 1341 aaKnown RBP7.99□□□□□ -1.13
ATP2C1-207ENST00000504612 SPRYD3Q8NCJ5 442 aa7.99□□□□□ -1.13
ATP2C1-207ENST00000504612 ZEB1P37275 1124 aaPredicted RBP7.98□□□□□ -1.13
ATP2C1-207ENST00000504612 CADPSQ9ULU8 1353 aa7.98□□□□□ -1.13
ATP2C1-207ENST00000504612 WIZO95785 1651 aa7.97□□□□□ -1.13
ATP2C1-207ENST00000504612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.97□□□□□ -1.13
ATP2C1-207ENST00000504612 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
ATP2C1-207ENST00000504612 IGSF3O75054 1194 aa7.96□□□□□ -1.13
ATP2C1-207ENST00000504612 RGL2O15211 777 aa7.96□□□□□ -1.14
ATP2C1-207ENST00000504612 MAPK8IP2Q13387 824 aaPredicted RBP7.95□□□□□ -1.14
ATP2C1-207ENST00000504612 MYT1Q01538 1121 aa7.94□□□□□ -1.14
ATP2C1-207ENST00000504612 C1orf115Q9H7X2 142 aa7.94□□□□□ -1.14
ATP2C1-207ENST00000504612 CFTRP13569 1480 aa7.94□□□□□ -1.14
ATP2C1-207ENST00000504612 CEP164Q9UPV0 1460 aa7.92□□□□□ -1.14
ATP2C1-207ENST00000504612 NECTIN2Q92692 538 aa7.92□□□□□ -1.14
ATP2C1-207ENST00000504612 DMRT2Q9Y5R5 561 aa7.92□□□□□ -1.14
ATP2C1-207ENST00000504612 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
ATP2C1-207ENST00000504612 YTHDC1Q96MU7 727 aaKnown RBP7.91□□□□□ -1.14
ATP2C1-207ENST00000504612 ATXN8OSP0DMR3 200 aa7.9□□□□□ -1.14
ATP2C1-207ENST00000504612 ECM2O94769 699 aaPredicted RBP7.89□□□□□ -1.15
ATP2C1-207ENST00000504612 FANCD2Q9BXW9 1451 aa7.89□□□□□ -1.15
ATP2C1-207ENST00000504612 RIMBP3CA6NJZ7 1639 aa7.88□□□□□ -1.15
ATP2C1-207ENST00000504612 RIMBP3BA6NNM3 1639 aa7.88□□□□□ -1.15
ATP2C1-207ENST00000504612 RIMBP3Q9UFD9 1639 aa7.88□□□□□ -1.15
ATP2C1-207ENST00000504612 URB2Q14146 1524 aaKnown RBP7.88□□□□□ -1.15
ATP2C1-207ENST00000504612 CCER1Q8TC90 406 aaPredicted RBP7.88□□□□□ -1.15
ATP2C1-207ENST00000504612 ARID3CA6NKF2 412 aa7.87□□□□□ -1.15
ATP2C1-207ENST00000504612 DIEXFQ68CQ4 756 aaKnown RBP7.87□□□□□ -1.15
ATP2C1-207ENST00000504612 WDR97A6NE52 1622 aa7.87□□□□□ -1.15
ATP2C1-207ENST00000504612 TRIM41Q8WV44 630 aa7.86□□□□□ -1.15
ATP2C1-207ENST00000504612 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
ATP2C1-207ENST00000504612 CHGAP10645 457 aaKnown RBP7.84□□□□□ -1.15
ATP2C1-207ENST00000504612 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
ATP2C1-207ENST00000504612 CENPBP07199 599 aaPredicted RBP7.83□□□□□ -1.16
ATP2C1-207ENST00000504612 TARBP1Q13395 1621 aaKnown RBP7.83□□□□□ -1.16
ATP2C1-207ENST00000504612 CHD1O14646 1710 aa7.82□□□□□ -1.16
ATP2C1-207ENST00000504612 IFT140Q96RY7 1462 aa7.82□□□□□ -1.16
ATP2C1-207ENST00000504612 EIF4G3O43432 1585 aaKnown RBP7.81□□□□□ -1.16
ATP2C1-207ENST00000504612 ABCC8Q09428 1581 aa7.8□□□□□ -1.16
ATP2C1-207ENST00000504612 NEUROD2Q15784 382 aa7.8□□□□□ -1.16
ATP2C1-207ENST00000504612 DNMBPQ6XZF7 1577 aa7.8□□□□□ -1.16
ATP2C1-207ENST00000504612 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
ATP2C1-207ENST00000504612 ARHGEF11O15085 1522 aa7.78□□□□□ -1.16
ATP2C1-207ENST00000504612 CHMP4AQ9BY43 222 aa7.78□□□□□ -1.16
ATP2C1-207ENST00000504612 TOPBP1Q92547 1522 aa7.77□□□□□ -1.17
ATP2C1-207ENST00000504612 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
ATP2C1-207ENST00000504612 SPDYE4A6NLX3 237 aa7.76□□□□□ -1.17
ATP2C1-207ENST00000504612 CLASP1Q7Z460 1538 aa7.75□□□□□ -1.17
ATP2C1-207ENST00000504612 OSCARQ8IYS5 282 aa7.74□□□□□ -1.17
ATP2C1-207ENST00000504612 ZNF608Q9ULD9 1512 aaPredicted RBP7.73□□□□□ -1.17
ATP2C1-207ENST00000504612 LMOD2Q6P5Q4 547 aa7.72□□□□□ -1.17
ATP2C1-207ENST00000504612 CCDC88BA6NC98 1476 aa7.72□□□□□ -1.17
ATP2C1-207ENST00000504612 MIER1Q8N108 512 aa7.72□□□□□ -1.17
ATP2C1-207ENST00000504612 ZMYND15Q9H091 742 aa7.72□□□□□ -1.17
ATP2C1-207ENST00000504612 SAMD1Q6SPF0 538 aaPredicted RBP7.71□□□□□ -1.18
ATP2C1-207ENST00000504612 SLC24A3Q9HC58 644 aa7.7□□□□□ -1.18
ATP2C1-207ENST00000504612 ARAP1Q96P48 1450 aa7.7□□□□□ -1.18
ATP2C1-207ENST00000504612 DHX37Q8IY37 1157 aaKnown RBP7.69□□□□□ -1.18
ATP2C1-207ENST00000504612 RNF216Q9NWF9 866 aaPredicted RBP7.69□□□□□ -1.18
ATP2C1-207ENST00000504612 PBRM1Q86U86 1689 aa7.69□□□□□ -1.18
ATP2C1-207ENST00000504612 NKX1-1Q15270 411 aaPredicted RBP7.68□□□□□ -1.18
ATP2C1-207ENST00000504612 ZBTB7CA1YPR0 619 aa7.68□□□□□ -1.18
ATP2C1-207ENST00000504612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATP2C1-207ENST00000504612 RSPH6AQ9H0K4 717 aa7.67□□□□□ -1.18
ATP2C1-207ENST00000504612 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
ATP2C1-207ENST00000504612 FOXD4L5Q5VV16 416 aaPredicted RBP7.67□□□□□ -1.18
ATP2C1-207ENST00000504612 FOXD4L4Q8WXT5 416 aaPredicted RBP7.67□□□□□ -1.18
ATP2C1-207ENST00000504612 APBB1O00213 710 aa7.66□□□□□ -1.18
ATP2C1-207ENST00000504612 HOXD11P31277 338 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-207ENST00000504612 PROM2Q8N271 834 aa7.66□□□□□ -1.18
ATP2C1-207ENST00000504612 POLA1P09884 1462 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-207ENST00000504612 PDIA4P13667 645 aaKnown RBP7.65□□□□□ -1.18
ATP2C1-207ENST00000504612 ABCA5Q8WWZ7 1642 aa7.65□□□□□ -1.19
ATP2C1-207ENST00000504612 SYNJ1O43426 1573 aa7.65□□□□□ -1.19
ATP2C1-207ENST00000504612 MAGI1Q96QZ7 1491 aaPredicted RBP7.65□□□□□ -1.19
ATP2C1-207ENST00000504612 CDK11BP21127 795 aaKnown RBP7.64□□□□□ -1.19
ATP2C1-207ENST00000504612 CDK11AQ9UQ88 783 aaPredicted RBP7.64□□□□□ -1.19
ATP2C1-207ENST00000504612 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
ATP2C1-207ENST00000504612 SHROOM2Q13796 1616 aa7.63□□□□□ -1.19
ATP2C1-207ENST00000504612 MTMR7Q9Y216 660 aa7.63□□□□□ -1.19
ATP2C1-207ENST00000504612 RAD21O60216 631 aa7.63□□□□□ -1.19
ATP2C1-207ENST00000504612 GPBP1L1Q9HC44 474 aaPredicted RBP7.63□□□□□ -1.19
ATP2C1-207ENST00000504612 MKRN4PQ13434 485 aaPredicted RBP7.62□□□□□ -1.19
ATP2C1-207ENST00000504612 HNRNPUL2Q1KMD3 747 aaKnown RBP7.61□□□□□ -1.19
ATP2C1-207ENST00000504612 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms