RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
USP17L28-201ENST00000504543 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
USP17L28-201ENST00000504543 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
USP17L28-201ENST00000504543 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
USP17L28-201ENST00000504543 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
USP17L28-201ENST00000504543 KIF21BO75037 1637 aa16.63■□□□□ 0.25
USP17L28-201ENST00000504543 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
USP17L28-201ENST00000504543 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
USP17L28-201ENST00000504543 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
USP17L28-201ENST00000504543 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
USP17L28-201ENST00000504543 UGGT2Q9NYU1 1516 aa16.58■□□□□ 0.25
USP17L28-201ENST00000504543 CARMIL2Q6F5E8 1435 aa16.54■□□□□ 0.24
USP17L28-201ENST00000504543 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
USP17L28-201ENST00000504543 FAM9AQ8IZU1 332 aaPredicted RBP16.51■□□□□ 0.23
USP17L28-201ENST00000504543 GOLGA3Q08378 1498 aa16.51■□□□□ 0.23
USP17L28-201ENST00000504543 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
USP17L28-201ENST00000504543 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
USP17L28-201ENST00000504543 TNIKQ9UKE5 1360 aa16.47■□□□□ 0.23
USP17L28-201ENST00000504543 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
USP17L28-201ENST00000504543 PTPRGP23470 1445 aa16.43■□□□□ 0.22
USP17L28-201ENST00000504543 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
USP17L28-201ENST00000504543 SAMD9Q5K651 1589 aa16.42■□□□□ 0.22
USP17L28-201ENST00000504543 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
USP17L28-201ENST00000504543 UHRF1BP1LA0JNW5 1464 aa16.38■□□□□ 0.21
USP17L28-201ENST00000504543 UBTFP17480 764 aaKnown RBP16.37■□□□□ 0.21
USP17L28-201ENST00000504543 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
USP17L28-201ENST00000504543 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
USP17L28-201ENST00000504543 ABCC2Q92887 1545 aa16.32■□□□□ 0.2
USP17L28-201ENST00000504543 ABCA8O94911 1581 aa16.29■□□□□ 0.2
USP17L28-201ENST00000504543 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
USP17L28-201ENST00000504543 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
USP17L28-201ENST00000504543 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
USP17L28-201ENST00000504543 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
USP17L28-201ENST00000504543 PLB1Q6P1J6 1458 aa16.23■□□□□ 0.19
USP17L28-201ENST00000504543 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
USP17L28-201ENST00000504543 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
USP17L28-201ENST00000504543 P3H3Q8IVL6 736 aa16.21■□□□□ 0.18
USP17L28-201ENST00000504543 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
USP17L28-201ENST00000504543 CLIP1P30622 1438 aa16.19■□□□□ 0.18
USP17L28-201ENST00000504543 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
USP17L28-201ENST00000504543 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
USP17L28-201ENST00000504543 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
USP17L28-201ENST00000504543 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
USP17L28-201ENST00000504543 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
USP17L28-201ENST00000504543 ATP10BO94823 1461 aa16.14■□□□□ 0.17
USP17L28-201ENST00000504543 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
USP17L28-201ENST00000504543 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
USP17L28-201ENST00000504543 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
USP17L28-201ENST00000504543 GLI2P10070 1586 aa16.12■□□□□ 0.17
USP17L28-201ENST00000504543 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
USP17L28-201ENST00000504543 KIF13AQ9H1H9 1805 aa16.11■□□□□ 0.17
USP17L28-201ENST00000504543 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
USP17L28-201ENST00000504543 HECW1Q76N89 1606 aa16.1■□□□□ 0.17
USP17L28-201ENST00000504543 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
USP17L28-201ENST00000504543 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
USP17L28-201ENST00000504543 EPRSP07814 1512 aaKnown RBP16.07■□□□□ 0.16
USP17L28-201ENST00000504543 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
USP17L28-201ENST00000504543 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
USP17L28-201ENST00000504543 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
USP17L28-201ENST00000504543 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.15
USP17L28-201ENST00000504543 PLEKHD1A6NEE1 506 aa16.01■□□□□ 0.15
USP17L28-201ENST00000504543 CDK11AQ9UQ88 783 aaPredicted RBP16.01■□□□□ 0.15
USP17L28-201ENST00000504543 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
USP17L28-201ENST00000504543 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
USP17L28-201ENST00000504543 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
USP17L28-201ENST00000504543 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
USP17L28-201ENST00000504543 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
USP17L28-201ENST00000504543 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
USP17L28-201ENST00000504543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
USP17L28-201ENST00000504543 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
USP17L28-201ENST00000504543 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
USP17L28-201ENST00000504543 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
USP17L28-201ENST00000504543 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
USP17L28-201ENST00000504543 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
USP17L28-201ENST00000504543 PPRC1Q5VV67 1664 aaKnown RBP15.93■□□□□ 0.14
USP17L28-201ENST00000504543 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
USP17L28-201ENST00000504543 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
USP17L28-201ENST00000504543 KCNH8Q96L42 1107 aa15.92■□□□□ 0.14
USP17L28-201ENST00000504543 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
USP17L28-201ENST00000504543 PHLDB1Q86UU1 1377 aa15.91■□□□□ 0.14
USP17L28-201ENST00000504543 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
USP17L28-201ENST00000504543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP17L28-201ENST00000504543 ARAP3Q8WWN8 1544 aa15.88■□□□□ 0.13
USP17L28-201ENST00000504543 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
USP17L28-201ENST00000504543 KIF14Q15058 1648 aa15.87■□□□□ 0.13
USP17L28-201ENST00000504543 NEO1Q92859 1461 aa15.86■□□□□ 0.13
USP17L28-201ENST00000504543 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.13
USP17L28-201ENST00000504543 PLCH2O75038 1416 aa15.83■□□□□ 0.13
USP17L28-201ENST00000504543 TIAM1Q13009 1591 aa15.83■□□□□ 0.13
USP17L28-201ENST00000504543 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
USP17L28-201ENST00000504543 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.12
USP17L28-201ENST00000504543 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
USP17L28-201ENST00000504543 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
USP17L28-201ENST00000504543 KDM6BO15054 1643 aa15.8■□□□□ 0.12
USP17L28-201ENST00000504543 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
USP17L28-201ENST00000504543 FANCAO15360 1455 aa15.77■□□□□ 0.11
USP17L28-201ENST00000504543 LRRC9Q6ZRR7 1453 aa15.77■□□□□ 0.11
USP17L28-201ENST00000504543 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
USP17L28-201ENST00000504543 PREX2Q70Z35 1606 aa15.75■□□□□ 0.11
USP17L28-201ENST00000504543 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms