RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
CCDC149-204ENST00000504487 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.51
CCDC149-204ENST00000504487 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.52
CCDC149-204ENST00000504487 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
CCDC149-204ENST00000504487 NPM2Q86SE8 214 aaKnown RBP11.82□□□□□ -0.52
CCDC149-204ENST00000504487 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
CCDC149-204ENST00000504487 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
CCDC149-204ENST00000504487 FAM9BQ8IZU0 186 aa11.81□□□□□ -0.52
CCDC149-204ENST00000504487 PPP4R2Q9NY27 417 aa11.81□□□□□ -0.52
CCDC149-204ENST00000504487 CCER2I3L3R5 266 aa11.81□□□□□ -0.52
CCDC149-204ENST00000504487 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
CCDC149-204ENST00000504487 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
CCDC149-204ENST00000504487 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
CCDC149-204ENST00000504487 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
CCDC149-204ENST00000504487 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
CCDC149-204ENST00000504487 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
CCDC149-204ENST00000504487 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
CCDC149-204ENST00000504487 CUX2O14529 1486 aa11.77□□□□□ -0.52
CCDC149-204ENST00000504487 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
CCDC149-204ENST00000504487 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
CCDC149-204ENST00000504487 ZNF326Q5BKZ1 582 aaKnown RBP11.76□□□□□ -0.53
CCDC149-204ENST00000504487 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
CCDC149-204ENST00000504487 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
CCDC149-204ENST00000504487 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
CCDC149-204ENST00000504487 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
CCDC149-204ENST00000504487 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
CCDC149-204ENST00000504487 MRS2Q9HD23 443 aa11.71□□□□□ -0.54
CCDC149-204ENST00000504487 CARMIL1Q5VZK9 1371 aa11.69□□□□□ -0.54
CCDC149-204ENST00000504487 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
CCDC149-204ENST00000504487 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
CCDC149-204ENST00000504487 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
CCDC149-204ENST00000504487 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
CCDC149-204ENST00000504487 LAS1LQ9Y4W2 734 aaKnown RBP11.68□□□□□ -0.54
CCDC149-204ENST00000504487 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
CCDC149-204ENST00000504487 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
CCDC149-204ENST00000504487 NEFMP07197 916 aa11.66□□□□□ -0.54
CCDC149-204ENST00000504487 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
CCDC149-204ENST00000504487 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
CCDC149-204ENST00000504487 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
CCDC149-204ENST00000504487 PAK3O75914 559 aaPredicted RBP11.64□□□□□ -0.55
CCDC149-204ENST00000504487 NESP48681 1621 aa11.64□□□□□ -0.55
CCDC149-204ENST00000504487 RAPGEF2Q9Y4G8 1499 aa11.63□□□□□ -0.55
CCDC149-204ENST00000504487 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
CCDC149-204ENST00000504487 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
CCDC149-204ENST00000504487 TIMELESSQ9UNS1 1208 aa11.61□□□□□ -0.55
CCDC149-204ENST00000504487 SETD5Q9C0A6 1442 aa11.61□□□□□ -0.55
CCDC149-204ENST00000504487 SENP3Q9H4L4 574 aaPredicted RBP11.6□□□□□ -0.55
CCDC149-204ENST00000504487 PDS5BQ9NTI5 1447 aa11.59□□□□□ -0.55
CCDC149-204ENST00000504487 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
CCDC149-204ENST00000504487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC149-204ENST00000504487 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
CCDC149-204ENST00000504487 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
CCDC149-204ENST00000504487 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC149-204ENST00000504487 PLPPR3Q6T4P5 718 aa11.57□□□□□ -0.56
CCDC149-204ENST00000504487 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
CCDC149-204ENST00000504487 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
CCDC149-204ENST00000504487 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
CCDC149-204ENST00000504487 KIF21BO75037 1637 aa11.53□□□□□ -0.56
CCDC149-204ENST00000504487 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
CCDC149-204ENST00000504487 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
CCDC149-204ENST00000504487 FHOD3Q2V2M9 1422 aa11.51□□□□□ -0.57
CCDC149-204ENST00000504487 WDR97A6NE52 1622 aa11.5□□□□□ -0.57
CCDC149-204ENST00000504487 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC149-204ENST00000504487 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
CCDC149-204ENST00000504487 PLEKHD1A6NEE1 506 aa11.5□□□□□ -0.57
CCDC149-204ENST00000504487 TMC1Q8TDI8 760 aa11.49□□□□□ -0.57
CCDC149-204ENST00000504487 GLIPR1L2Q4G1C9 344 aa11.48□□□□□ -0.57
CCDC149-204ENST00000504487 SYNJ1O43426 1573 aa11.48□□□□□ -0.57
CCDC149-204ENST00000504487 IGF1RP08069 1367 aa11.48□□□□□ -0.57
CCDC149-204ENST00000504487 RRBP1Q9P2E9 1410 aaKnown RBP11.48□□□□□ -0.57
CCDC149-204ENST00000504487 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
CCDC149-204ENST00000504487 KDM2AQ9Y2K7 1162 aa11.47□□□□□ -0.57
CCDC149-204ENST00000504487 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
CCDC149-204ENST00000504487 TSPY4P0CV99 314 aa11.46□□□□□ -0.57
CCDC149-204ENST00000504487 TSPY10P0CW01 314 aa11.46□□□□□ -0.57
CCDC149-204ENST00000504487 DDRGK1Q96HY6 314 aa11.46□□□□□ -0.57
CCDC149-204ENST00000504487 AQRO60306 1485 aaKnown RBP eCLIP11.46□□□□□ -0.58
CCDC149-204ENST00000504487 USP35Q9P2H5 1018 aa11.45□□□□□ -0.58
CCDC149-204ENST00000504487 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
CCDC149-204ENST00000504487 ARXQ96QS3 562 aa11.44□□□□□ -0.58
CCDC149-204ENST00000504487 CCDC184Q52MB2 194 aa11.44□□□□□ -0.58
CCDC149-204ENST00000504487 CFTRP13569 1480 aa11.43□□□□□ -0.58
CCDC149-204ENST00000504487 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
CCDC149-204ENST00000504487 FOXD1Q16676 465 aa11.42□□□□□ -0.58
CCDC149-204ENST00000504487 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
CCDC149-204ENST00000504487 NUDCQ9Y266 331 aa11.42□□□□□ -0.58
CCDC149-204ENST00000504487 RGL3Q3MIN7 710 aa11.41□□□□□ -0.58
CCDC149-204ENST00000504487 TCERG1O14776 1098 aaKnown RBP11.4□□□□□ -0.58
CCDC149-204ENST00000504487 GSE1Q14687 1217 aa11.4□□□□□ -0.58
CCDC149-204ENST00000504487 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
CCDC149-204ENST00000504487 PDE4AP27815 886 aa11.39□□□□□ -0.59
CCDC149-204ENST00000504487 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
CCDC149-204ENST00000504487 ARAP1Q96P48 1450 aa11.39□□□□□ -0.59
CCDC149-204ENST00000504487 CUX1P39880 1505 aa11.38□□□□□ -0.59
CCDC149-204ENST00000504487 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
CCDC149-204ENST00000504487 UBE2Q2Q8WVN8 375 aa11.36□□□□□ -0.59
CCDC149-204ENST00000504487 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
CCDC149-204ENST00000504487 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
CCDC149-204ENST00000504487 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
CCDC149-204ENST00000504487 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms