RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
ITGA3-203ENST00000504417 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
ITGA3-203ENST00000504417 FBLN2P98095 1184 aa12.54□□□□□ -0.4
ITGA3-203ENST00000504417 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
ITGA3-203ENST00000504417 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
ITGA3-203ENST00000504417 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
ITGA3-203ENST00000504417 IGF1RP08069 1367 aa12.51□□□□□ -0.41
ITGA3-203ENST00000504417 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
ITGA3-203ENST00000504417 KIAA0586Q9BVV6 1533 aa12.43□□□□□ -0.42
ITGA3-203ENST00000504417 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
ITGA3-203ENST00000504417 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
ITGA3-203ENST00000504417 KIF13AQ9H1H9 1805 aa12.4□□□□□ -0.42
ITGA3-203ENST00000504417 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
ITGA3-203ENST00000504417 KCNA4P22459 653 aa12.39□□□□□ -0.43
ITGA3-203ENST00000504417 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
ITGA3-203ENST00000504417 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
ITGA3-203ENST00000504417 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
ITGA3-203ENST00000504417 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
ITGA3-203ENST00000504417 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
ITGA3-203ENST00000504417 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
ITGA3-203ENST00000504417 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
ITGA3-203ENST00000504417 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
ITGA3-203ENST00000504417 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
ITGA3-203ENST00000504417 MAPKBP1O60336 1514 aa12.29□□□□□ -0.44
ITGA3-203ENST00000504417 DIP2BQ9P265 1576 aa12.26□□□□□ -0.45
ITGA3-203ENST00000504417 KIF21BO75037 1637 aa12.25□□□□□ -0.45
ITGA3-203ENST00000504417 MSH5O43196 834 aa12.24□□□□□ -0.45
ITGA3-203ENST00000504417 SAMD9Q5K651 1589 aa12.24□□□□□ -0.45
ITGA3-203ENST00000504417 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
ITGA3-203ENST00000504417 EEA1Q15075 1411 aa12.23□□□□□ -0.45
ITGA3-203ENST00000504417 ABCC2Q92887 1545 aa12.21□□□□□ -0.45
ITGA3-203ENST00000504417 TNIKQ9UKE5 1360 aa12.21□□□□□ -0.45
ITGA3-203ENST00000504417 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.45
ITGA3-203ENST00000504417 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.46
ITGA3-203ENST00000504417 ABCA8O94911 1581 aa12.2□□□□□ -0.46
ITGA3-203ENST00000504417 CARMIL2Q6F5E8 1435 aa12.2□□□□□ -0.46
ITGA3-203ENST00000504417 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
ITGA3-203ENST00000504417 KDM5BQ9UGL1 1544 aa12.17□□□□□ -0.46
ITGA3-203ENST00000504417 PTPRGP23470 1445 aa12.17□□□□□ -0.46
ITGA3-203ENST00000504417 TSPOAP1O95153 1857 aa12.15□□□□□ -0.46
ITGA3-203ENST00000504417 GLI2P10070 1586 aa12.15□□□□□ -0.46
ITGA3-203ENST00000504417 UACAQ9BZF9 1416 aa12.15□□□□□ -0.46
ITGA3-203ENST00000504417 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
ITGA3-203ENST00000504417 MAP3K4Q9Y6R4 1608 aa12.13□□□□□ -0.47
ITGA3-203ENST00000504417 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
ITGA3-203ENST00000504417 PLB1Q6P1J6 1458 aa12.11□□□□□ -0.47
ITGA3-203ENST00000504417 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
ITGA3-203ENST00000504417 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
ITGA3-203ENST00000504417 ASXL2Q76L83 1435 aa12.09□□□□□ -0.47
ITGA3-203ENST00000504417 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
ITGA3-203ENST00000504417 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
ITGA3-203ENST00000504417 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
ITGA3-203ENST00000504417 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
ITGA3-203ENST00000504417 LRRIQ1Q96JM4 1722 aa12.05□□□□□ -0.48
ITGA3-203ENST00000504417 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
ITGA3-203ENST00000504417 KDM6BO15054 1643 aa12.02□□□□□ -0.49
ITGA3-203ENST00000504417 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
ITGA3-203ENST00000504417 FHOD3Q2V2M9 1422 aa12□□□□□ -0.49
ITGA3-203ENST00000504417 ATP10BO94823 1461 aa12□□□□□ -0.49
ITGA3-203ENST00000504417 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
ITGA3-203ENST00000504417 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
ITGA3-203ENST00000504417 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
ITGA3-203ENST00000504417 ARHGAP35Q9NRY4 1499 aa11.98□□□□□ -0.49
ITGA3-203ENST00000504417 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
ITGA3-203ENST00000504417 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
ITGA3-203ENST00000504417 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
ITGA3-203ENST00000504417 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
ITGA3-203ENST00000504417 COL17A1Q9UMD9 1497 aaPredicted RBP11.94□□□□□ -0.5
ITGA3-203ENST00000504417 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
ITGA3-203ENST00000504417 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
ITGA3-203ENST00000504417 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
ITGA3-203ENST00000504417 TEX14Q8IWB6 1497 aa11.91□□□□□ -0.5
ITGA3-203ENST00000504417 PCF11O94913 1555 aaKnown RBP11.9□□□□□ -0.5
ITGA3-203ENST00000504417 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
ITGA3-203ENST00000504417 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
ITGA3-203ENST00000504417 CDK13Q14004 1512 aaKnown RBP11.9□□□□□ -0.5
ITGA3-203ENST00000504417 FRMPD1Q5SYB0 1578 aa11.89□□□□□ -0.51
ITGA3-203ENST00000504417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
ITGA3-203ENST00000504417 RICTORQ6R327 1708 aa11.87□□□□□ -0.51
ITGA3-203ENST00000504417 ARAP3Q8WWN8 1544 aa11.86□□□□□ -0.51
ITGA3-203ENST00000504417 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
ITGA3-203ENST00000504417 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
ITGA3-203ENST00000504417 MYO5CQ9NQX4 1742 aa11.85□□□□□ -0.51
ITGA3-203ENST00000504417 KIF14Q15058 1648 aa11.85□□□□□ -0.51
ITGA3-203ENST00000504417 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
ITGA3-203ENST00000504417 CFAP74Q9C0B2 1584 aa11.84□□□□□ -0.51
ITGA3-203ENST00000504417 CDC42BPBQ9Y5S2 1711 aa11.83□□□□□ -0.52
ITGA3-203ENST00000504417 NEO1Q92859 1461 aa11.82□□□□□ -0.52
ITGA3-203ENST00000504417 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
ITGA3-203ENST00000504417 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
ITGA3-203ENST00000504417 CASKIN1Q8WXD9 1431 aa11.8□□□□□ -0.52
ITGA3-203ENST00000504417 FYCO1Q9BQS8 1478 aa11.8□□□□□ -0.52
ITGA3-203ENST00000504417 ARID3CA6NKF2 412 aa11.79□□□□□ -0.52
ITGA3-203ENST00000504417 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
ITGA3-203ENST00000504417 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
ITGA3-203ENST00000504417 SIGLEC1Q9BZZ2 1709 aa11.79□□□□□ -0.52
ITGA3-203ENST00000504417 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
ITGA3-203ENST00000504417 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
ITGA3-203ENST00000504417 CCDC18Q5T9S5 1454 aa11.77□□□□□ -0.52
ITGA3-203ENST00000504417 ZMYM4Q5VZL5 1548 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms