RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
CYSTM1-202ENST00000504227 KIAA0586Q9BVV6 1533 aa22.34■■□□□ 1.17
CYSTM1-202ENST00000504227 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
CYSTM1-202ENST00000504227 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
CYSTM1-202ENST00000504227 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
CYSTM1-202ENST00000504227 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
CYSTM1-202ENST00000504227 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
CYSTM1-202ENST00000504227 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
CYSTM1-202ENST00000504227 CEP162Q5TB80 1403 aa22.16■■□□□ 1.14
CYSTM1-202ENST00000504227 CLIP1P30622 1438 aa22.15■■□□□ 1.14
CYSTM1-202ENST00000504227 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
CYSTM1-202ENST00000504227 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
CYSTM1-202ENST00000504227 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
CYSTM1-202ENST00000504227 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
CYSTM1-202ENST00000504227 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
CYSTM1-202ENST00000504227 EFCAB5A4FU69 1503 aa22.07■■□□□ 1.12
CYSTM1-202ENST00000504227 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
CYSTM1-202ENST00000504227 DISP1Q96F81 1524 aa22.06■■□□□ 1.12
CYSTM1-202ENST00000504227 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
CYSTM1-202ENST00000504227 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
CYSTM1-202ENST00000504227 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
CYSTM1-202ENST00000504227 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
CYSTM1-202ENST00000504227 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
CYSTM1-202ENST00000504227 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
CYSTM1-202ENST00000504227 PTPRGP23470 1445 aa21.95■■□□□ 1.1
CYSTM1-202ENST00000504227 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
CYSTM1-202ENST00000504227 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
CYSTM1-202ENST00000504227 DNAJC5Q9H3Z4 198 aa21.86■■□□□ 1.09
CYSTM1-202ENST00000504227 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
CYSTM1-202ENST00000504227 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
CYSTM1-202ENST00000504227 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
CYSTM1-202ENST00000504227 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
CYSTM1-202ENST00000504227 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.09
CYSTM1-202ENST00000504227 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
CYSTM1-202ENST00000504227 CASKIN1Q8WXD9 1431 aa21.79■■□□□ 1.08
CYSTM1-202ENST00000504227 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
CYSTM1-202ENST00000504227 PLB1Q6P1J6 1458 aa21.78■■□□□ 1.08
CYSTM1-202ENST00000504227 ABCA8O94911 1581 aa21.74■■□□□ 1.07
CYSTM1-202ENST00000504227 APLP2Q06481 763 aa21.74■■□□□ 1.07
CYSTM1-202ENST00000504227 FYCO1Q9BQS8 1478 aa21.74■■□□□ 1.07
CYSTM1-202ENST00000504227 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
CYSTM1-202ENST00000504227 PCF11O94913 1555 aaKnown RBP21.72■■□□□ 1.07
CYSTM1-202ENST00000504227 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
CYSTM1-202ENST00000504227 ABCC2Q92887 1545 aa21.7■■□□□ 1.06
CYSTM1-202ENST00000504227 HECW1Q76N89 1606 aa21.69■■□□□ 1.06
CYSTM1-202ENST00000504227 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
CYSTM1-202ENST00000504227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
CYSTM1-202ENST00000504227 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
CYSTM1-202ENST00000504227 NUP153P49790 1475 aaKnown RBP21.68■■□□□ 1.06
CYSTM1-202ENST00000504227 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
CYSTM1-202ENST00000504227 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.05
CYSTM1-202ENST00000504227 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.05
CYSTM1-202ENST00000504227 ADCY10Q96PN6 1610 aa21.63■■□□□ 1.05
CYSTM1-202ENST00000504227 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-202ENST00000504227 ATP10BO94823 1461 aa21.62■■□□□ 1.05
CYSTM1-202ENST00000504227 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
CYSTM1-202ENST00000504227 MAP3K1Q13233 1512 aa21.59■■□□□ 1.05
CYSTM1-202ENST00000504227 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
CYSTM1-202ENST00000504227 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
CYSTM1-202ENST00000504227 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
CYSTM1-202ENST00000504227 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
CYSTM1-202ENST00000504227 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
CYSTM1-202ENST00000504227 ZCCHC11Q5TAX3 1644 aaKnown RBP21.52■■□□□ 1.04
CYSTM1-202ENST00000504227 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
CYSTM1-202ENST00000504227 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
CYSTM1-202ENST00000504227 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
CYSTM1-202ENST00000504227 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
CYSTM1-202ENST00000504227 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
CYSTM1-202ENST00000504227 ASXL2Q76L83 1435 aa21.46■■□□□ 1.03
CYSTM1-202ENST00000504227 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
CYSTM1-202ENST00000504227 MAGI3Q5TCQ9 1506 aa21.42■■□□□ 1.02
CYSTM1-202ENST00000504227 EHBP1L1Q8N3D4 1523 aa21.42■■□□□ 1.02
CYSTM1-202ENST00000504227 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
CYSTM1-202ENST00000504227 MAPKBP1O60336 1514 aa21.4■■□□□ 1.02
CYSTM1-202ENST00000504227 NCOA2Q15596 1464 aa21.32■■□□□ 1
CYSTM1-202ENST00000504227 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
CYSTM1-202ENST00000504227 KIF14Q15058 1648 aa21.32■■□□□ 1
CYSTM1-202ENST00000504227 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
CYSTM1-202ENST00000504227 FAM69CQ0P6D2 419 aa21.28■■□□□ 1
CYSTM1-202ENST00000504227 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
CYSTM1-202ENST00000504227 PHLDB1Q86UU1 1377 aa21.25■□□□□ 0.99
CYSTM1-202ENST00000504227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.25■□□□□ 0.99
CYSTM1-202ENST00000504227 MYOM3Q5VTT5 1437 aa21.22■□□□□ 0.99
CYSTM1-202ENST00000504227 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
CYSTM1-202ENST00000504227 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
CYSTM1-202ENST00000504227 GLI2P10070 1586 aa21.21■□□□□ 0.99
CYSTM1-202ENST00000504227 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
CYSTM1-202ENST00000504227 ABCA9Q8IUA7 1624 aa21.2■□□□□ 0.98
CYSTM1-202ENST00000504227 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
CYSTM1-202ENST00000504227 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
CYSTM1-202ENST00000504227 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
CYSTM1-202ENST00000504227 PLCH2O75038 1416 aa21.19■□□□□ 0.98
CYSTM1-202ENST00000504227 EFCAB2Q5VUJ9 269 aa21.17■□□□□ 0.98
CYSTM1-202ENST00000504227 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
CYSTM1-202ENST00000504227 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
CYSTM1-202ENST00000504227 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
CYSTM1-202ENST00000504227 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
CYSTM1-202ENST00000504227 MYO5CQ9NQX4 1742 aa21.13■□□□□ 0.97
CYSTM1-202ENST00000504227 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
CYSTM1-202ENST00000504227 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms