RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 RUSC2Q8N2Y8 1516 aa38.01■■■■□ 3.67
LSM6-203ENST00000503982 JPH4Q96JJ6 628 aa38■■■■□ 3.67
LSM6-203ENST00000503982 CARMIL1Q5VZK9 1371 aa37.85■■■■□ 3.65
LSM6-203ENST00000503982 KIAA0586Q9BVV6 1533 aa37.82■■■■□ 3.64
LSM6-203ENST00000503982 NPM1P06748 294 aaKnown RBP eCLIP37.63■■■■□ 3.61
LSM6-203ENST00000503982 TTBK1Q5TCY1 1321 aaPredicted RBP37.6■■■■□ 3.61
LSM6-203ENST00000503982 IQGAP2Q13576 1575 aa37.58■■■■□ 3.61
LSM6-203ENST00000503982 RAPGEF2Q9Y4G8 1499 aa37.55■■■■□ 3.6
LSM6-203ENST00000503982 CARMIL2Q6F5E8 1435 aa37.53■■■■□ 3.6
LSM6-203ENST00000503982 ADCY10Q96PN6 1610 aa37.52■■■■□ 3.6
LSM6-203ENST00000503982 KIF13AQ9H1H9 1805 aa37.5■■■■□ 3.59
LSM6-203ENST00000503982 PTPRGP23470 1445 aa37.46■■■■□ 3.59
LSM6-203ENST00000503982 TNIKQ9UKE5 1360 aa37.42■■■■□ 3.58
LSM6-203ENST00000503982 MAPKBP1O60336 1514 aa37.37■■■■□ 3.57
LSM6-203ENST00000503982 FAM69CQ0P6D2 419 aa37.35■■■■□ 3.57
LSM6-203ENST00000503982 CTTNBP2Q8WZ74 1663 aa37.34■■■■□ 3.57
LSM6-203ENST00000503982 ABCC10Q5T3U5 1492 aa37.3■■■■□ 3.56
LSM6-203ENST00000503982 DISP1Q96F81 1524 aa37.28■■■■□ 3.56
LSM6-203ENST00000503982 UGGT2Q9NYU1 1516 aa37.26■■■■□ 3.56
LSM6-203ENST00000503982 DIP2BQ9P265 1576 aa37.26■■■■□ 3.56
LSM6-203ENST00000503982 KIAA0556O60303 1618 aa37.21■■■■□ 3.55
LSM6-203ENST00000503982 TSPOAP1O95153 1857 aa37.18■■■■□ 3.54
LSM6-203ENST00000503982 ABCC2Q92887 1545 aa37.18■■■■□ 3.54
LSM6-203ENST00000503982 UACAQ9BZF9 1416 aa37.17■■■■□ 3.54
LSM6-203ENST00000503982 PRXQ9BXM0 1461 aa37.14■■■■□ 3.54
LSM6-203ENST00000503982 UHRF1BP1LA0JNW5 1464 aa37.11■■■■□ 3.53
LSM6-203ENST00000503982 GOLGA3Q08378 1498 aa37.08■■■■□ 3.53
LSM6-203ENST00000503982 ASXL2Q76L83 1435 aa37.05■■■■□ 3.52
LSM6-203ENST00000503982 CSRNP3Q8WYN3 585 aa37.04■■■■□ 3.52
LSM6-203ENST00000503982 PLB1Q6P1J6 1458 aa37.02■■■■□ 3.52
LSM6-203ENST00000503982 AEBP2Q6ZN18 517 aaPredicted RBP37.02■■■■□ 3.52
LSM6-203ENST00000503982 ZCCHC11Q5TAX3 1644 aaKnown RBP36.99■■■■□ 3.51
LSM6-203ENST00000503982 KDM6BO15054 1643 aa36.94■■■■□ 3.5
LSM6-203ENST00000503982 KDM5BQ9UGL1 1544 aa36.94■■■■□ 3.5
LSM6-203ENST00000503982 FAM9AQ8IZU1 332 aaPredicted RBP36.93■■■■□ 3.5
LSM6-203ENST00000503982 EEA1Q15075 1411 aa36.93■■■■□ 3.5
LSM6-203ENST00000503982 P3H3Q8IVL6 736 aa36.87■■■■□ 3.49
LSM6-203ENST00000503982 GLI2P10070 1586 aa36.87■■■■□ 3.49
LSM6-203ENST00000503982 EPRSP07814 1512 aaKnown RBP36.81■■■■□ 3.48
LSM6-203ENST00000503982 ABCA8O94911 1581 aa36.8■■■■□ 3.48
LSM6-203ENST00000503982 RANGAP1P46060 587 aaPredicted RBP36.79■■■■□ 3.48
LSM6-203ENST00000503982 PPRC1Q5VV67 1664 aaKnown RBP36.77■■■■□ 3.48
LSM6-203ENST00000503982 WDR7Q9Y4E6 1490 aa36.74■■■■□ 3.47
LSM6-203ENST00000503982 MAP3K4Q9Y6R4 1608 aa36.71■■■■□ 3.47
LSM6-203ENST00000503982 ARID3CA6NKF2 412 aa36.69■■■■□ 3.46
LSM6-203ENST00000503982 SAMD9Q5K651 1589 aa36.69■■■■□ 3.46
LSM6-203ENST00000503982 KCNH8Q96L42 1107 aa36.68■■■■□ 3.46
LSM6-203ENST00000503982 TEX14Q8IWB6 1497 aa36.64■■■■□ 3.46
LSM6-203ENST00000503982 KIF21BO75037 1637 aa36.63■■■■□ 3.45
LSM6-203ENST00000503982 EHMT2Q96KQ7 1210 aa36.62■■■■□ 3.45
LSM6-203ENST00000503982 CHIC1Q5VXU3 224 aa36.61■■■■□ 3.45
LSM6-203ENST00000503982 RAPGEF6Q8TEU7 1601 aa36.56■■■■□ 3.44
LSM6-203ENST00000503982 CFAP43Q8NDM7 1665 aa36.55■■■■□ 3.44
LSM6-203ENST00000503982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.53■■■■□ 3.44
LSM6-203ENST00000503982 HNRNPUL2Q1KMD3 747 aaKnown RBP36.53■■■■□ 3.44
LSM6-203ENST00000503982 FHOD3Q2V2M9 1422 aa36.51■■■■□ 3.44
LSM6-203ENST00000503982 CD109Q6YHK3 1445 aa36.51■■■■□ 3.43
LSM6-203ENST00000503982 ATP10BO94823 1461 aa36.5■■■■□ 3.43
LSM6-203ENST00000503982 UBTFP17480 764 aaKnown RBP36.47■■■■□ 3.43
LSM6-203ENST00000503982 EFCAB5A4FU69 1503 aa36.42■■■■□ 3.42
LSM6-203ENST00000503982 COL17A1Q9UMD9 1497 aaPredicted RBP36.41■■■■□ 3.42
LSM6-203ENST00000503982 MAGI3Q5TCQ9 1506 aa36.39■■■■□ 3.42
LSM6-203ENST00000503982 NUP153P49790 1475 aaKnown RBP36.33■■■■□ 3.41
LSM6-203ENST00000503982 KDM4FA0A1W2PPD8 638 aa36.3■■■■□ 3.4
LSM6-203ENST00000503982 ABCA9Q8IUA7 1624 aa36.27■■■■□ 3.4
LSM6-203ENST00000503982 PLEKHD1A6NEE1 506 aa36.22■■■■□ 3.39
LSM6-203ENST00000503982 ATP1B4Q9UN42 357 aaPredicted RBP36.2■■■■□ 3.39
LSM6-203ENST00000503982 ADGRL1O94910 1474 aa36.17■■■■□ 3.38
LSM6-203ENST00000503982 FMN1Q68DA7 1419 aa36.1■■■■□ 3.37
LSM6-203ENST00000503982 ARHGAP35Q9NRY4 1499 aa36.1■■■■□ 3.37
LSM6-203ENST00000503982 CDK13Q14004 1512 aaKnown RBP36.09■■■■□ 3.37
LSM6-203ENST00000503982 ARAP3Q8WWN8 1544 aa36.09■■■■□ 3.37
LSM6-203ENST00000503982 PHLDB1Q86UU1 1377 aa36.07■■■■□ 3.36
LSM6-203ENST00000503982 HECW1Q76N89 1606 aa36.07■■■■□ 3.36
LSM6-203ENST00000503982 NEO1Q92859 1461 aa36.04■■■■□ 3.36
LSM6-203ENST00000503982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.98■■■■□ 3.35
LSM6-203ENST00000503982 RAPGEF3O95398 923 aa35.97■■■■□ 3.35
LSM6-203ENST00000503982 TTC37Q6PGP7 1564 aa35.96■■■■□ 3.35
LSM6-203ENST00000503982 CFAP74Q9C0B2 1584 aa35.95■■■■□ 3.35
LSM6-203ENST00000503982 CDK11AQ9UQ88 783 aaPredicted RBP35.92■■■■□ 3.34
LSM6-203ENST00000503982 FANCAO15360 1455 aa35.89■■■■□ 3.34
LSM6-203ENST00000503982 AKNAQ7Z591 1439 aa35.87■■■■□ 3.33
LSM6-203ENST00000503982 FRMPD1Q5SYB0 1578 aa35.84■■■■□ 3.33
LSM6-203ENST00000503982 DENND4BO75064 1496 aaPredicted RBP35.83■■■■□ 3.33
LSM6-203ENST00000503982 LRRIQ1Q96JM4 1722 aa35.82■■■■□ 3.32
LSM6-203ENST00000503982 MYO5CQ9NQX4 1742 aa35.8■■■■□ 3.32
LSM6-203ENST00000503982 RICTORQ6R327 1708 aa35.79■■■■□ 3.32
LSM6-203ENST00000503982 KIF14Q15058 1648 aa35.79■■■■□ 3.32
LSM6-203ENST00000503982 PCF11O94913 1555 aaKnown RBP35.78■■■■□ 3.32
LSM6-203ENST00000503982 CLIP1P30622 1438 aa35.77■■■■□ 3.32
LSM6-203ENST00000503982 ARID4BQ4LE39 1312 aaPredicted RBP35.77■■■■□ 3.32
LSM6-203ENST00000503982 TROQ12816 1431 aaPredicted RBP35.74■■■■□ 3.31
LSM6-203ENST00000503982 PLCH2O75038 1416 aa35.73■■■■□ 3.31
LSM6-203ENST00000503982 CASKIN1Q8WXD9 1431 aa35.7■■■■□ 3.31
LSM6-203ENST00000503982 ARHGEF40Q8TER5 1519 aa35.68■■■■□ 3.3
LSM6-203ENST00000503982 CCDC18Q5T9S5 1454 aa35.68■■■■□ 3.3
LSM6-203ENST00000503982 EFCAB2Q5VUJ9 269 aa35.66■■■■□ 3.3
LSM6-203ENST00000503982 SCAPERQ9BY12 1400 aa35.66■■■■□ 3.3
LSM6-203ENST00000503982 ARHGAP5Q13017 1502 aa35.63■■■■□ 3.29
LSM6-203ENST00000503982 BCORL1Q5H9F3 1711 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms