RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TNIKQ9UKE5 1360 aa33.03■■■□□ 2.88
CDC42SE2-206ENST00000503291 OSCARQ8IYS5 282 aa33.01■■■□□ 2.87
CDC42SE2-206ENST00000503291 CTTNBP2Q8WZ74 1663 aa32.98■■■□□ 2.87
CDC42SE2-206ENST00000503291 KIAA0586Q9BVV6 1533 aa32.98■■■□□ 2.87
CDC42SE2-206ENST00000503291 IQGAP2Q13576 1575 aa32.9■■■□□ 2.86
CDC42SE2-206ENST00000503291 RANGAP1P46060 587 aaPredicted RBP32.89■■■□□ 2.85
CDC42SE2-206ENST00000503291 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
CDC42SE2-206ENST00000503291 JPH4Q96JJ6 628 aa32.84■■■□□ 2.85
CDC42SE2-206ENST00000503291 CEP162Q5TB80 1403 aa32.77■■■□□ 2.84
CDC42SE2-206ENST00000503291 UGGT2Q9NYU1 1516 aa32.74■■■□□ 2.83
CDC42SE2-206ENST00000503291 CLIP1P30622 1438 aa32.72■■■□□ 2.83
CDC42SE2-206ENST00000503291 SHROOM2Q13796 1616 aa32.7■■■□□ 2.83
CDC42SE2-206ENST00000503291 PRG4Q92954 1404 aaPredicted RBP32.66■■■□□ 2.82
CDC42SE2-206ENST00000503291 P3H3Q8IVL6 736 aa32.65■■■□□ 2.82
CDC42SE2-206ENST00000503291 ARHGAP35Q9NRY4 1499 aa32.64■■■□□ 2.82
CDC42SE2-206ENST00000503291 DISP1Q96F81 1524 aa32.63■■■□□ 2.81
CDC42SE2-206ENST00000503291 EFCAB5A4FU69 1503 aa32.62■■■□□ 2.81
CDC42SE2-206ENST00000503291 SAMD9Q5K651 1589 aa32.62■■■□□ 2.81
CDC42SE2-206ENST00000503291 CARMIL2Q6F5E8 1435 aa32.6■■■□□ 2.81
CDC42SE2-206ENST00000503291 KIAA0556O60303 1618 aa32.57■■■□□ 2.8
CDC42SE2-206ENST00000503291 ERCC6L2Q5T890 1561 aa32.54■■■□□ 2.8
CDC42SE2-206ENST00000503291 FHOD3Q2V2M9 1422 aa32.52■■■□□ 2.8
CDC42SE2-206ENST00000503291 ARAP1Q96P48 1450 aa32.51■■■□□ 2.8
CDC42SE2-206ENST00000503291 TTBK1Q5TCY1 1321 aaPredicted RBP32.46■■■□□ 2.79
CDC42SE2-206ENST00000503291 ARHGEF11O15085 1522 aa32.41■■■□□ 2.78
CDC42SE2-206ENST00000503291 PTPRGP23470 1445 aa32.38■■■□□ 2.77
CDC42SE2-206ENST00000503291 FMN1Q68DA7 1419 aa32.34■■■□□ 2.77
CDC42SE2-206ENST00000503291 RIMBP3CA6NJZ7 1639 aa32.31■■■□□ 2.76
CDC42SE2-206ENST00000503291 RIMBP3BA6NNM3 1639 aa32.31■■■□□ 2.76
CDC42SE2-206ENST00000503291 RIMBP3Q9UFD9 1639 aa32.31■■■□□ 2.76
CDC42SE2-206ENST00000503291 VPS8Q8N3P4 1428 aa32.31■■■□□ 2.76
CDC42SE2-206ENST00000503291 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
CDC42SE2-206ENST00000503291 PLB1Q6P1J6 1458 aa32.23■■■□□ 2.75
CDC42SE2-206ENST00000503291 ATP1B4Q9UN42 357 aaPredicted RBP32.19■■■□□ 2.74
CDC42SE2-206ENST00000503291 CASKIN1Q8WXD9 1431 aa32.18■■■□□ 2.74
CDC42SE2-206ENST00000503291 UACAQ9BZF9 1416 aa32.17■■■□□ 2.74
CDC42SE2-206ENST00000503291 ABCA8O94911 1581 aa32.17■■■□□ 2.74
CDC42SE2-206ENST00000503291 PCF11O94913 1555 aaKnown RBP32.17■■■□□ 2.74
CDC42SE2-206ENST00000503291 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
CDC42SE2-206ENST00000503291 RAPGEF6Q8TEU7 1601 aa32.15■■■□□ 2.74
CDC42SE2-206ENST00000503291 FYCO1Q9BQS8 1478 aa32.13■■■□□ 2.73
CDC42SE2-206ENST00000503291 ABCC2Q92887 1545 aa32.07■■■□□ 2.72
CDC42SE2-206ENST00000503291 NUP153P49790 1475 aaKnown RBP32.07■■■□□ 2.72
CDC42SE2-206ENST00000503291 HECW1Q76N89 1606 aa32.06■■■□□ 2.72
CDC42SE2-206ENST00000503291 ARID3CA6NKF2 412 aa32.05■■■□□ 2.72
CDC42SE2-206ENST00000503291 UHRF1BP1LA0JNW5 1464 aa32.05■■■□□ 2.72
CDC42SE2-206ENST00000503291 ADCY10Q96PN6 1610 aa32.02■■■□□ 2.72
CDC42SE2-206ENST00000503291 APLP2Q06481 763 aa32■■■□□ 2.71
CDC42SE2-206ENST00000503291 EPRSP07814 1512 aaKnown RBP31.99■■■□□ 2.71
CDC42SE2-206ENST00000503291 LRRIQ1Q96JM4 1722 aa31.98■■■□□ 2.71
CDC42SE2-206ENST00000503291 ATP10BO94823 1461 aa31.96■■■□□ 2.71
CDC42SE2-206ENST00000503291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.95■■■□□ 2.7
CDC42SE2-206ENST00000503291 HNRNPUL2Q1KMD3 747 aaKnown RBP31.95■■■□□ 2.7
CDC42SE2-206ENST00000503291 CDK13Q14004 1512 aaKnown RBP31.94■■■□□ 2.7
CDC42SE2-206ENST00000503291 CCDC18Q5T9S5 1454 aa31.94■■■□□ 2.7
CDC42SE2-206ENST00000503291 KDM5BQ9UGL1 1544 aa31.92■■■□□ 2.7
CDC42SE2-206ENST00000503291 MAP3K1Q13233 1512 aa31.88■■■□□ 2.69
CDC42SE2-206ENST00000503291 NPM1P06748 294 aaKnown RBP eCLIP31.88■■■□□ 2.69
CDC42SE2-206ENST00000503291 TIAM1Q13009 1591 aa31.88■■■□□ 2.69
CDC42SE2-206ENST00000503291 ZCCHC11Q5TAX3 1644 aaKnown RBP31.85■■■□□ 2.69
CDC42SE2-206ENST00000503291 CFAP43Q8NDM7 1665 aa31.84■■■□□ 2.69
CDC42SE2-206ENST00000503291 KANK4Q5T7N3 995 aaPredicted RBP31.83■■■□□ 2.69
CDC42SE2-206ENST00000503291 CDK11AQ9UQ88 783 aaPredicted RBP31.82■■■□□ 2.68
CDC42SE2-206ENST00000503291 PPARGC1BQ86YN6 1023 aaKnown RBP31.8■■■□□ 2.68
CDC42SE2-206ENST00000503291 PLEKHD1A6NEE1 506 aa31.79■■■□□ 2.68
CDC42SE2-206ENST00000503291 LRRC9Q6ZRR7 1453 aa31.76■■■□□ 2.67
CDC42SE2-206ENST00000503291 MTUS2Q5JR59 1369 aa31.76■■■□□ 2.67
CDC42SE2-206ENST00000503291 MAGI3Q5TCQ9 1506 aa31.75■■■□□ 2.67
CDC42SE2-206ENST00000503291 TROQ12816 1431 aaPredicted RBP31.69■■■□□ 2.66
CDC42SE2-206ENST00000503291 ASXL2Q76L83 1435 aa31.69■■■□□ 2.66
CDC42SE2-206ENST00000503291 EHBP1L1Q8N3D4 1523 aa31.65■■■□□ 2.66
CDC42SE2-206ENST00000503291 WDR7Q9Y4E6 1490 aa31.64■■■□□ 2.66
CDC42SE2-206ENST00000503291 KCNH8Q96L42 1107 aa31.63■■■□□ 2.65
CDC42SE2-206ENST00000503291 MAPKBP1O60336 1514 aa31.63■■■□□ 2.65
CDC42SE2-206ENST00000503291 SUPT6HQ7KZ85 1726 aaKnown RBP31.54■■■□□ 2.64
CDC42SE2-206ENST00000503291 KIF14Q15058 1648 aa31.54■■■□□ 2.64
CDC42SE2-206ENST00000503291 NCOA2Q15596 1464 aa31.52■■■□□ 2.64
CDC42SE2-206ENST00000503291 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.45■■■□□ 2.63
CDC42SE2-206ENST00000503291 ABCC10Q5T3U5 1492 aa31.45■■■□□ 2.62
CDC42SE2-206ENST00000503291 PHLDB1Q86UU1 1377 aa31.43■■■□□ 2.62
CDC42SE2-206ENST00000503291 CCNB3Q8WWL7 1395 aa31.41■■■□□ 2.62
CDC42SE2-206ENST00000503291 TTC37Q6PGP7 1564 aa31.4■■■□□ 2.62
CDC42SE2-206ENST00000503291 FAM69CQ0P6D2 419 aa31.38■■■□□ 2.61
CDC42SE2-206ENST00000503291 ABCA9Q8IUA7 1624 aa31.37■■■□□ 2.61
CDC42SE2-206ENST00000503291 DIP2BQ9P265 1576 aa31.36■■■□□ 2.61
CDC42SE2-206ENST00000503291 GPATCH8Q9UKJ3 1502 aaKnown RBP31.36■■■□□ 2.61
CDC42SE2-206ENST00000503291 MYOM3Q5VTT5 1437 aa31.35■■■□□ 2.61
CDC42SE2-206ENST00000503291 GLI2P10070 1586 aa31.34■■■□□ 2.61
CDC42SE2-206ENST00000503291 CDC42BPAQ5VT25 1732 aa31.31■■■□□ 2.6
CDC42SE2-206ENST00000503291 CD109Q6YHK3 1445 aa31.29■■■□□ 2.6
CDC42SE2-206ENST00000503291 CFDP1Q9UEE9 299 aaPredicted RBP31.29■■■□□ 2.6
CDC42SE2-206ENST00000503291 PLCH2O75038 1416 aa31.28■■■□□ 2.6
CDC42SE2-206ENST00000503291 MYO5CQ9NQX4 1742 aa31.28■■■□□ 2.6
CDC42SE2-206ENST00000503291 ITSN2Q9NZM3 1697 aa31.26■■■□□ 2.6
CDC42SE2-206ENST00000503291 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.6
CDC42SE2-206ENST00000503291 FGD6Q6ZV73 1430 aa31.25■■■□□ 2.59
CDC42SE2-206ENST00000503291 PREX2Q70Z35 1606 aa31.25■■■□□ 2.59
CDC42SE2-206ENST00000503291 MIA2Q96PC5 1412 aa31.24■■■□□ 2.59
CDC42SE2-206ENST00000503291 CDC42BPBQ9Y5S2 1711 aa31.24■■■□□ 2.59
CDC42SE2-206ENST00000503291 MAP3K4Q9Y6R4 1608 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms