RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 JPH4Q96JJ6 628 aa26.28■■□□□ 1.8
DDR1-248ENST00000503180 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
DDR1-248ENST00000503180 KIAA0586Q9BVV6 1533 aa26.24■■□□□ 1.79
DDR1-248ENST00000503180 CYB5RLQ6IPT4 315 aa26.23■■□□□ 1.79
DDR1-248ENST00000503180 PRXQ9BXM0 1461 aa26.19■■□□□ 1.78
DDR1-248ENST00000503180 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.78
DDR1-248ENST00000503180 SHROOM2Q13796 1616 aa26.14■■□□□ 1.77
DDR1-248ENST00000503180 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
DDR1-248ENST00000503180 IQGAP2Q13576 1575 aa26.04■■□□□ 1.76
DDR1-248ENST00000503180 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
DDR1-248ENST00000503180 CARMIL2Q6F5E8 1435 aa26.02■■□□□ 1.76
DDR1-248ENST00000503180 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
DDR1-248ENST00000503180 KIF21BO75037 1637 aa25.92■■□□□ 1.74
DDR1-248ENST00000503180 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
DDR1-248ENST00000503180 UGGT2Q9NYU1 1516 aa25.92■■□□□ 1.74
DDR1-248ENST00000503180 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
DDR1-248ENST00000503180 TNIKQ9UKE5 1360 aa25.89■■□□□ 1.74
DDR1-248ENST00000503180 PTPRGP23470 1445 aa25.88■■□□□ 1.73
DDR1-248ENST00000503180 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
DDR1-248ENST00000503180 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
DDR1-248ENST00000503180 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
DDR1-248ENST00000503180 NPM1P06748 294 aaKnown RBP eCLIP25.81■■□□□ 1.72
DDR1-248ENST00000503180 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
DDR1-248ENST00000503180 KIAA0556O60303 1618 aa25.76■■□□□ 1.71
DDR1-248ENST00000503180 P3H3Q8IVL6 736 aa25.74■■□□□ 1.71
DDR1-248ENST00000503180 TRHP20396 242 aaPredicted RBP25.71■■□□□ 1.71
DDR1-248ENST00000503180 UACAQ9BZF9 1416 aa25.68■■□□□ 1.7
DDR1-248ENST00000503180 UHRF1BP1LA0JNW5 1464 aa25.62■■□□□ 1.69
DDR1-248ENST00000503180 ADCY10Q96PN6 1610 aa25.62■■□□□ 1.69
DDR1-248ENST00000503180 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
DDR1-248ENST00000503180 EFCAB5A4FU69 1503 aa25.58■■□□□ 1.69
DDR1-248ENST00000503180 ABCC2Q92887 1545 aa25.57■■□□□ 1.68
DDR1-248ENST00000503180 PLB1Q6P1J6 1458 aa25.54■■□□□ 1.68
DDR1-248ENST00000503180 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
DDR1-248ENST00000503180 ABCA8O94911 1581 aa25.48■■□□□ 1.67
DDR1-248ENST00000503180 MAPKBP1O60336 1514 aa25.48■■□□□ 1.67
DDR1-248ENST00000503180 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
DDR1-248ENST00000503180 LOC105371045A0A1W2PR82 267 aa25.47■■□□□ 1.67
DDR1-248ENST00000503180 ARHGAP35Q9NRY4 1499 aa25.46■■□□□ 1.67
DDR1-248ENST00000503180 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
DDR1-248ENST00000503180 FMN1Q68DA7 1419 aa25.43■■□□□ 1.66
DDR1-248ENST00000503180 ASXL2Q76L83 1435 aa25.41■■□□□ 1.66
DDR1-248ENST00000503180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.41■■□□□ 1.66
DDR1-248ENST00000503180 HNRNPUL2Q1KMD3 747 aaKnown RBP25.41■■□□□ 1.66
DDR1-248ENST00000503180 CLIP1P30622 1438 aa25.4■■□□□ 1.66
DDR1-248ENST00000503180 ARID3CA6NKF2 412 aa25.39■■□□□ 1.66
DDR1-248ENST00000503180 ABCC10Q5T3U5 1492 aa25.39■■□□□ 1.65
DDR1-248ENST00000503180 RAPGEF6Q8TEU7 1601 aa25.38■■□□□ 1.65
DDR1-248ENST00000503180 ATP1B4Q9UN42 357 aaPredicted RBP25.38■■□□□ 1.65
DDR1-248ENST00000503180 ZCCHC11Q5TAX3 1644 aaKnown RBP25.37■■□□□ 1.65
DDR1-248ENST00000503180 ATP10BO94823 1461 aa25.35■■□□□ 1.65
DDR1-248ENST00000503180 KCNH8Q96L42 1107 aa25.31■■□□□ 1.64
DDR1-248ENST00000503180 NUP153P49790 1475 aaKnown RBP25.3■■□□□ 1.64
DDR1-248ENST00000503180 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
DDR1-248ENST00000503180 WDR7Q9Y4E6 1490 aa25.28■■□□□ 1.64
DDR1-248ENST00000503180 PLEKHD1A6NEE1 506 aa25.28■■□□□ 1.64
DDR1-248ENST00000503180 DIP2BQ9P265 1576 aa25.27■■□□□ 1.64
DDR1-248ENST00000503180 KIF13AQ9H1H9 1805 aa25.26■■□□□ 1.63
DDR1-248ENST00000503180 CDK11AQ9UQ88 783 aaPredicted RBP25.24■■□□□ 1.63
DDR1-248ENST00000503180 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
DDR1-248ENST00000503180 GLI2P10070 1586 aa25.21■■□□□ 1.63
DDR1-248ENST00000503180 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.62
DDR1-248ENST00000503180 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
DDR1-248ENST00000503180 FYCO1Q9BQS8 1478 aa25.11■■□□□ 1.61
DDR1-248ENST00000503180 CDK13Q14004 1512 aaKnown RBP25.11■■□□□ 1.61
DDR1-248ENST00000503180 CD109Q6YHK3 1445 aa25.1■■□□□ 1.61
DDR1-248ENST00000503180 CCDC18Q5T9S5 1454 aa25.09■■□□□ 1.61
DDR1-248ENST00000503180 PCF11O94913 1555 aaKnown RBP25.08■■□□□ 1.61
DDR1-248ENST00000503180 TSPOAP1O95153 1857 aa25.08■■□□□ 1.61
DDR1-248ENST00000503180 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
DDR1-248ENST00000503180 TEX14Q8IWB6 1497 aa25.04■■□□□ 1.6
DDR1-248ENST00000503180 CFAP43Q8NDM7 1665 aa25.03■■□□□ 1.6
DDR1-248ENST00000503180 TROQ12816 1431 aaPredicted RBP24.99■■□□□ 1.59
DDR1-248ENST00000503180 MAGI3Q5TCQ9 1506 aa24.99■■□□□ 1.59
DDR1-248ENST00000503180 ABCA9Q8IUA7 1624 aa24.98■■□□□ 1.59
DDR1-248ENST00000503180 VPS8Q8N3P4 1428 aa24.98■■□□□ 1.59
DDR1-248ENST00000503180 LRRIQ1Q96JM4 1722 aa24.96■■□□□ 1.59
DDR1-248ENST00000503180 PPRC1Q5VV67 1664 aaKnown RBP24.94■■□□□ 1.58
DDR1-248ENST00000503180 PHLDB1Q86UU1 1377 aa24.93■■□□□ 1.58
DDR1-248ENST00000503180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.586e-7■■■■□ 21.9
DDR1-248ENST00000503180 APLP2Q06481 763 aa24.9■■□□□ 1.58
DDR1-248ENST00000503180 MTUS2Q5JR59 1369 aa24.9■■□□□ 1.58
DDR1-248ENST00000503180 KDM6BO15054 1643 aa24.89■■□□□ 1.57
DDR1-248ENST00000503180 KIF14Q15058 1648 aa24.88■■□□□ 1.57
DDR1-248ENST00000503180 PLCH2O75038 1416 aa24.86■■□□□ 1.57
DDR1-248ENST00000503180 EFCAB2Q5VUJ9 269 aa24.85■■□□□ 1.57
DDR1-248ENST00000503180 NEO1Q92859 1461 aa24.84■■□□□ 1.57
DDR1-248ENST00000503180 TTC37Q6PGP7 1564 aa24.83■■□□□ 1.57
DDR1-248ENST00000503180 FANCAO15360 1455 aa24.8■■□□□ 1.56
DDR1-248ENST00000503180 COL17A1Q9UMD9 1497 aaPredicted RBP24.79■■□□□ 1.56
DDR1-248ENST00000503180 ARAP3Q8WWN8 1544 aa24.79■■□□□ 1.56
DDR1-248ENST00000503180 AKNAQ7Z591 1439 aa24.78■■□□□ 1.56
DDR1-248ENST00000503180 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
DDR1-248ENST00000503180 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
DDR1-248ENST00000503180 CFAP74Q9C0B2 1584 aa24.75■■□□□ 1.55
DDR1-248ENST00000503180 MYO5CQ9NQX4 1742 aa24.75■■□□□ 1.55
DDR1-248ENST00000503180 CCNB3Q8WWL7 1395 aa24.74■■□□□ 1.55
DDR1-248ENST00000503180 EHBP1L1Q8N3D4 1523 aa24.74■■□□□ 1.55
DDR1-248ENST00000503180 ARHGAP5Q13017 1502 aa24.72■■□□□ 1.55
DDR1-248ENST00000503180 RAPGEF3O95398 923 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms