RNA–Protein interactions for RNA: ENST00000503147.1

YIPF3-211, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-211ENST00000503147 PRXQ9BXM0 1461 aa20.74■□□□□ 0.91
YIPF3-211ENST00000503147 EEA1Q15075 1411 aa20.73■□□□□ 0.91
YIPF3-211ENST00000503147 KIAA0586Q9BVV6 1533 aa20.73■□□□□ 0.91
YIPF3-211ENST00000503147 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
YIPF3-211ENST00000503147 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
YIPF3-211ENST00000503147 CYB5RLQ6IPT4 315 aa20.7■□□□□ 0.9
YIPF3-211ENST00000503147 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
YIPF3-211ENST00000503147 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
YIPF3-211ENST00000503147 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
YIPF3-211ENST00000503147 IQGAP2Q13576 1575 aa20.58■□□□□ 0.88
YIPF3-211ENST00000503147 UGGT2Q9NYU1 1516 aa20.51■□□□□ 0.87
YIPF3-211ENST00000503147 KIF21BO75037 1637 aa20.5■□□□□ 0.87
YIPF3-211ENST00000503147 CTTNBP2Q8WZ74 1663 aa20.49■□□□□ 0.87
YIPF3-211ENST00000503147 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
YIPF3-211ENST00000503147 CARMIL2Q6F5E8 1435 aa20.48■□□□□ 0.87
YIPF3-211ENST00000503147 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
YIPF3-211ENST00000503147 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
YIPF3-211ENST00000503147 PTPRGP23470 1445 aa20.42■□□□□ 0.86
YIPF3-211ENST00000503147 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
YIPF3-211ENST00000503147 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
YIPF3-211ENST00000503147 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
YIPF3-211ENST00000503147 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
YIPF3-211ENST00000503147 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
YIPF3-211ENST00000503147 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
YIPF3-211ENST00000503147 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
YIPF3-211ENST00000503147 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
YIPF3-211ENST00000503147 TRHP20396 242 aaPredicted RBP20.28■□□□□ 0.84
YIPF3-211ENST00000503147 UACAQ9BZF9 1416 aa20.27■□□□□ 0.84
YIPF3-211ENST00000503147 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
YIPF3-211ENST00000503147 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
YIPF3-211ENST00000503147 PLB1Q6P1J6 1458 aa20.22■□□□□ 0.83
YIPF3-211ENST00000503147 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
YIPF3-211ENST00000503147 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
YIPF3-211ENST00000503147 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
YIPF3-211ENST00000503147 ABCA8O94911 1581 aa20.18■□□□□ 0.82
YIPF3-211ENST00000503147 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
YIPF3-211ENST00000503147 MAPKBP1O60336 1514 aa20.16■□□□□ 0.82
YIPF3-211ENST00000503147 KDM5BQ9UGL1 1544 aa20.16■□□□□ 0.82
YIPF3-211ENST00000503147 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
YIPF3-211ENST00000503147 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
YIPF3-211ENST00000503147 ZCCHC11Q5TAX3 1644 aaKnown RBP20.08■□□□□ 0.8
YIPF3-211ENST00000503147 ASXL2Q76L83 1435 aa20.08■□□□□ 0.8
YIPF3-211ENST00000503147 RAPGEF6Q8TEU7 1601 aa20.06■□□□□ 0.8
YIPF3-211ENST00000503147 ARID3CA6NKF2 412 aa20.06■□□□□ 0.8
YIPF3-211ENST00000503147 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
YIPF3-211ENST00000503147 ATP10BO94823 1461 aa20.05■□□□□ 0.8
YIPF3-211ENST00000503147 CLIP1P30622 1438 aa20.05■□□□□ 0.8
YIPF3-211ENST00000503147 NUP153P49790 1475 aaKnown RBP20.04■□□□□ 0.8
YIPF3-211ENST00000503147 FMN1Q68DA7 1419 aa20.03■□□□□ 0.8
YIPF3-211ENST00000503147 DIP2BQ9P265 1576 aa20.01■□□□□ 0.79
YIPF3-211ENST00000503147 KIF13AQ9H1H9 1805 aa20.01■□□□□ 0.79
YIPF3-211ENST00000503147 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
YIPF3-211ENST00000503147 WDR7Q9Y4E6 1490 aa19.98■□□□□ 0.79
YIPF3-211ENST00000503147 EPRSP07814 1512 aaKnown RBP19.97■□□□□ 0.79
YIPF3-211ENST00000503147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
YIPF3-211ENST00000503147 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
YIPF3-211ENST00000503147 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
YIPF3-211ENST00000503147 ATP1B4Q9UN42 357 aaPredicted RBP19.94■□□□□ 0.78
YIPF3-211ENST00000503147 GLI2P10070 1586 aa19.94■□□□□ 0.78
YIPF3-211ENST00000503147 CASKIN1Q8WXD9 1431 aa19.91■□□□□ 0.78
YIPF3-211ENST00000503147 HECW1Q76N89 1606 aa19.88■□□□□ 0.77
YIPF3-211ENST00000503147 CDK13Q14004 1512 aaKnown RBP19.88■□□□□ 0.77
YIPF3-211ENST00000503147 PLEKHD1A6NEE1 506 aa19.88■□□□□ 0.77
YIPF3-211ENST00000503147 PCF11O94913 1555 aaKnown RBP19.86■□□□□ 0.77
YIPF3-211ENST00000503147 MAP3K4Q9Y6R4 1608 aa19.84■□□□□ 0.77
YIPF3-211ENST00000503147 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.76
YIPF3-211ENST00000503147 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
YIPF3-211ENST00000503147 TSPOAP1O95153 1857 aa19.82■□□□□ 0.76
YIPF3-211ENST00000503147 CD109Q6YHK3 1445 aa19.81■□□□□ 0.76
YIPF3-211ENST00000503147 CDK11AQ9UQ88 783 aaPredicted RBP19.8■□□□□ 0.76
YIPF3-211ENST00000503147 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
YIPF3-211ENST00000503147 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
YIPF3-211ENST00000503147 ABCA9Q8IUA7 1624 aa19.76■□□□□ 0.75
YIPF3-211ENST00000503147 CFAP43Q8NDM7 1665 aa19.76■□□□□ 0.75
YIPF3-211ENST00000503147 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
YIPF3-211ENST00000503147 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
YIPF3-211ENST00000503147 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
YIPF3-211ENST00000503147 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
YIPF3-211ENST00000503147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.72■□□□□ 0.75
YIPF3-211ENST00000503147 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
YIPF3-211ENST00000503147 COL17A1Q9UMD9 1497 aaPredicted RBP19.67■□□□□ 0.74
YIPF3-211ENST00000503147 TTC37Q6PGP7 1564 aa19.67■□□□□ 0.74
YIPF3-211ENST00000503147 KIF14Q15058 1648 aa19.66■□□□□ 0.74
YIPF3-211ENST00000503147 KDM6BO15054 1643 aa19.65■□□□□ 0.74
YIPF3-211ENST00000503147 PLCH2O75038 1416 aa19.63■□□□□ 0.73
YIPF3-211ENST00000503147 PHLDB1Q86UU1 1377 aa19.61■□□□□ 0.73
YIPF3-211ENST00000503147 NEO1Q92859 1461 aa19.6■□□□□ 0.73
YIPF3-211ENST00000503147 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
YIPF3-211ENST00000503147 ARAP3Q8WWN8 1544 aa19.59■□□□□ 0.73
YIPF3-211ENST00000503147 FANCAO15360 1455 aa19.58■□□□□ 0.72
YIPF3-211ENST00000503147 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
YIPF3-211ENST00000503147 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
YIPF3-211ENST00000503147 EFCAB2Q5VUJ9 269 aa19.56■□□□□ 0.72
YIPF3-211ENST00000503147 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
YIPF3-211ENST00000503147 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
YIPF3-211ENST00000503147 RAPGEF3O95398 923 aa19.54■□□□□ 0.72
YIPF3-211ENST00000503147 EHBP1L1Q8N3D4 1523 aa19.54■□□□□ 0.72
YIPF3-211ENST00000503147 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
YIPF3-211ENST00000503147 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
YIPF3-211ENST00000503147 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms