RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
RNF4-203ENST00000503123 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
RNF4-203ENST00000503123 RAPGEF2Q9Y4G8 1499 aa14.91□□□□□ -0.02
RNF4-203ENST00000503123 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
RNF4-203ENST00000503123 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
RNF4-203ENST00000503123 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
RNF4-203ENST00000503123 EEA1Q15075 1411 aa14.84□□□□□ -0.03
RNF4-203ENST00000503123 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
RNF4-203ENST00000503123 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
RNF4-203ENST00000503123 CARMIL2Q6F5E8 1435 aa14.78□□□□□ -0.04
RNF4-203ENST00000503123 ADCY10Q96PN6 1610 aa14.76□□□□□ -0.05
RNF4-203ENST00000503123 KIAA0556O60303 1618 aa14.75□□□□□ -0.05
RNF4-203ENST00000503123 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
RNF4-203ENST00000503123 KIF21BO75037 1637 aa14.74□□□□□ -0.05
RNF4-203ENST00000503123 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
RNF4-203ENST00000503123 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
RNF4-203ENST00000503123 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
RNF4-203ENST00000503123 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
RNF4-203ENST00000503123 GOLGA3Q08378 1498 aa14.7□□□□□ -0.06
RNF4-203ENST00000503123 PTPRGP23470 1445 aa14.7□□□□□ -0.06
RNF4-203ENST00000503123 MAPKBP1O60336 1514 aa14.69□□□□□ -0.06
RNF4-203ENST00000503123 UHRF1BP1LA0JNW5 1464 aa14.67□□□□□ -0.06
RNF4-203ENST00000503123 TRHP20396 242 aaPredicted RBP14.66□□□□□ -0.06
RNF4-203ENST00000503123 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
RNF4-203ENST00000503123 ABCC2Q92887 1545 aa14.65□□□□□ -0.06
RNF4-203ENST00000503123 UACAQ9BZF9 1416 aa14.62□□□□□ -0.07
RNF4-203ENST00000503123 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
RNF4-203ENST00000503123 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
RNF4-203ENST00000503123 ZCCHC11Q5TAX3 1644 aaKnown RBP14.59□□□□□ -0.07
RNF4-203ENST00000503123 ABCC10Q5T3U5 1492 aa14.59□□□□□ -0.07
RNF4-203ENST00000503123 KDM5BQ9UGL1 1544 aa14.59□□□□□ -0.07
RNF4-203ENST00000503123 ABCA8O94911 1581 aa14.59□□□□□ -0.07
RNF4-203ENST00000503123 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
RNF4-203ENST00000503123 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
RNF4-203ENST00000503123 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
RNF4-203ENST00000503123 TSPOAP1O95153 1857 aa14.54□□□□□ -0.08
RNF4-203ENST00000503123 GLI2P10070 1586 aa14.52□□□□□ -0.08
RNF4-203ENST00000503123 TTBK1Q5TCY1 1321 aaPredicted RBP14.52□□□□□ -0.08
RNF4-203ENST00000503123 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.09
RNF4-203ENST00000503123 ASXL2Q76L83 1435 aa14.51□□□□□ -0.09
RNF4-203ENST00000503123 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
RNF4-203ENST00000503123 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
RNF4-203ENST00000503123 PPRC1Q5VV67 1664 aaKnown RBP14.46□□□□□ -0.09
RNF4-203ENST00000503123 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.09
RNF4-203ENST00000503123 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
RNF4-203ENST00000503123 EPRSP07814 1512 aaKnown RBP14.45□□□□□ -0.1
RNF4-203ENST00000503123 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
RNF4-203ENST00000503123 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
RNF4-203ENST00000503123 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
RNF4-203ENST00000503123 ATP10BO94823 1461 aa14.41□□□□□ -0.1
RNF4-203ENST00000503123 NUP153P49790 1475 aaKnown RBP14.4□□□□□ -0.1
RNF4-203ENST00000503123 ARHGAP35Q9NRY4 1499 aa14.4□□□□□ -0.1
RNF4-203ENST00000503123 KDM6BO15054 1643 aa14.38□□□□□ -0.11
RNF4-203ENST00000503123 FMN1Q68DA7 1419 aa14.38□□□□□ -0.11
RNF4-203ENST00000503123 HECW1Q76N89 1606 aa14.37□□□□□ -0.11
RNF4-203ENST00000503123 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
RNF4-203ENST00000503123 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
RNF4-203ENST00000503123 TEX14Q8IWB6 1497 aa14.36□□□□□ -0.11
RNF4-203ENST00000503123 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
RNF4-203ENST00000503123 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
RNF4-203ENST00000503123 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
RNF4-203ENST00000503123 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
RNF4-203ENST00000503123 PCF11O94913 1555 aaKnown RBP14.28□□□□□ -0.12
RNF4-203ENST00000503123 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
RNF4-203ENST00000503123 CLIP1P30622 1438 aa14.27□□□□□ -0.12
RNF4-203ENST00000503123 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
RNF4-203ENST00000503123 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
RNF4-203ENST00000503123 CASKIN1Q8WXD9 1431 aa14.25□□□□□ -0.13
RNF4-203ENST00000503123 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
RNF4-203ENST00000503123 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
RNF4-203ENST00000503123 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
RNF4-203ENST00000503123 PLEKHD1A6NEE1 506 aa14.24□□□□□ -0.13
RNF4-203ENST00000503123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
RNF4-203ENST00000503123 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
RNF4-203ENST00000503123 CCDC18Q5T9S5 1454 aa14.24□□□□□ -0.13
RNF4-203ENST00000503123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNF4-203ENST00000503123 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
RNF4-203ENST00000503123 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
RNF4-203ENST00000503123 ARAP3Q8WWN8 1544 aa14.22□□□□□ -0.13
RNF4-203ENST00000503123 NEO1Q92859 1461 aa14.21□□□□□ -0.13
RNF4-203ENST00000503123 COL17A1Q9UMD9 1497 aaPredicted RBP14.21□□□□□ -0.13
RNF4-203ENST00000503123 KIF14Q15058 1648 aa14.21□□□□□ -0.13
RNF4-203ENST00000503123 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
RNF4-203ENST00000503123 CEP162Q5TB80 1403 aa14.2□□□□□ -0.14
RNF4-203ENST00000503123 TROQ12816 1431 aaPredicted RBP14.17□□□□□ -0.14
RNF4-203ENST00000503123 RICTORQ6R327 1708 aa14.17□□□□□ -0.14
RNF4-203ENST00000503123 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.14
RNF4-203ENST00000503123 ATP1B4Q9UN42 357 aaPredicted RBP14.15□□□□□ -0.14
RNF4-203ENST00000503123 FANCAO15360 1455 aa14.14□□□□□ -0.15
RNF4-203ENST00000503123 CDC42BPAQ5VT25 1732 aa14.14□□□□□ -0.15
RNF4-203ENST00000503123 PREX2Q70Z35 1606 aa14.13□□□□□ -0.15
RNF4-203ENST00000503123 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
RNF4-203ENST00000503123 PLCH2O75038 1416 aa14.12□□□□□ -0.15
RNF4-203ENST00000503123 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
RNF4-203ENST00000503123 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
RNF4-203ENST00000503123 LOC105371045A0A1W2PR82 267 aa14.07□□□□□ -0.16
RNF4-203ENST00000503123 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
RNF4-203ENST00000503123 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
RNF4-203ENST00000503123 ARHGAP5Q13017 1502 aa14.05□□□□□ -0.16
RNF4-203ENST00000503123 EHBP1L1Q8N3D4 1523 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms