RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 SHROOM2Q13796 1616 aa20.38■□□□□ 0.85
SYNE4-206ENST00000503121 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
SYNE4-206ENST00000503121 KIAA0586Q9BVV6 1533 aa20.34■□□□□ 0.85
SYNE4-206ENST00000503121 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
SYNE4-206ENST00000503121 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
SYNE4-206ENST00000503121 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
SYNE4-206ENST00000503121 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
SYNE4-206ENST00000503121 CARMIL2Q6F5E8 1435 aa20.17■□□□□ 0.82
SYNE4-206ENST00000503121 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
SYNE4-206ENST00000503121 NPM1P06748 294 aaKnown RBP eCLIP20.14■□□□□ 0.81
SYNE4-206ENST00000503121 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
SYNE4-206ENST00000503121 PTPRGP23470 1445 aa20.13■□□□□ 0.81
SYNE4-206ENST00000503121 TNIKQ9UKE5 1360 aa20.11■□□□□ 0.81
SYNE4-206ENST00000503121 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
SYNE4-206ENST00000503121 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
SYNE4-206ENST00000503121 EEA1Q15075 1411 aa20.08■□□□□ 0.8
SYNE4-206ENST00000503121 DISP1Q96F81 1524 aa20.06■□□□□ 0.8
SYNE4-206ENST00000503121 UGGT2Q9NYU1 1516 aa20.06■□□□□ 0.8
SYNE4-206ENST00000503121 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
SYNE4-206ENST00000503121 CTTNBP2Q8WZ74 1663 aa20.02■□□□□ 0.8
SYNE4-206ENST00000503121 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
SYNE4-206ENST00000503121 KIAA0556O60303 1618 aa19.98■□□□□ 0.79
SYNE4-206ENST00000503121 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
SYNE4-206ENST00000503121 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
SYNE4-206ENST00000503121 MAPKBP1O60336 1514 aa19.94■□□□□ 0.78
SYNE4-206ENST00000503121 ABCC2Q92887 1545 aa19.92■□□□□ 0.78
SYNE4-206ENST00000503121 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
SYNE4-206ENST00000503121 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
SYNE4-206ENST00000503121 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
SYNE4-206ENST00000503121 ABCC10Q5T3U5 1492 aa19.91■□□□□ 0.78
SYNE4-206ENST00000503121 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
SYNE4-206ENST00000503121 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
SYNE4-206ENST00000503121 PLB1Q6P1J6 1458 aa19.85■□□□□ 0.77
SYNE4-206ENST00000503121 KIF21BO75037 1637 aa19.84■□□□□ 0.77
SYNE4-206ENST00000503121 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
SYNE4-206ENST00000503121 ASXL2Q76L83 1435 aa19.84■□□□□ 0.77
SYNE4-206ENST00000503121 DIP2BQ9P265 1576 aa19.83■□□□□ 0.76
SYNE4-206ENST00000503121 KDM5BQ9UGL1 1544 aa19.82■□□□□ 0.76
SYNE4-206ENST00000503121 ABCA8O94911 1581 aa19.77■□□□□ 0.76
SYNE4-206ENST00000503121 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
SYNE4-206ENST00000503121 SAMD9Q5K651 1589 aa19.76■□□□□ 0.75
SYNE4-206ENST00000503121 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
SYNE4-206ENST00000503121 FHOD3Q2V2M9 1422 aa19.72■□□□□ 0.75
SYNE4-206ENST00000503121 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
SYNE4-206ENST00000503121 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
SYNE4-206ENST00000503121 EPRSP07814 1512 aaKnown RBP19.7■□□□□ 0.74
SYNE4-206ENST00000503121 WDR7Q9Y4E6 1490 aa19.69■□□□□ 0.74
SYNE4-206ENST00000503121 GLI2P10070 1586 aa19.69■□□□□ 0.74
SYNE4-206ENST00000503121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.68■□□□□ 0.74
SYNE4-206ENST00000503121 HNRNPUL2Q1KMD3 747 aaKnown RBP19.68■□□□□ 0.74
SYNE4-206ENST00000503121 EFCAB5A4FU69 1503 aa19.67■□□□□ 0.74
SYNE4-206ENST00000503121 ATP10BO94823 1461 aa19.66■□□□□ 0.74
SYNE4-206ENST00000503121 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
SYNE4-206ENST00000503121 KDM6BO15054 1643 aa19.58■□□□□ 0.73
SYNE4-206ENST00000503121 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
SYNE4-206ENST00000503121 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.72
SYNE4-206ENST00000503121 ARHGAP35Q9NRY4 1499 aa19.57■□□□□ 0.72
SYNE4-206ENST00000503121 MAP3K4Q9Y6R4 1608 aa19.57■□□□□ 0.72
SYNE4-206ENST00000503121 CD109Q6YHK3 1445 aa19.57■□□□□ 0.72
SYNE4-206ENST00000503121 TEX14Q8IWB6 1497 aa19.56■□□□□ 0.72
SYNE4-206ENST00000503121 PLEKHD1A6NEE1 506 aa19.55■□□□□ 0.72
SYNE4-206ENST00000503121 PPRC1Q5VV67 1664 aaKnown RBP19.55■□□□□ 0.72
SYNE4-206ENST00000503121 FMN1Q68DA7 1419 aa19.53■□□□□ 0.72
SYNE4-206ENST00000503121 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
SYNE4-206ENST00000503121 MAGI3Q5TCQ9 1506 aa19.49■□□□□ 0.71
SYNE4-206ENST00000503121 AEBP2Q6ZN18 517 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-206ENST00000503121 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-206ENST00000503121 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
SYNE4-206ENST00000503121 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
SYNE4-206ENST00000503121 CLIP1P30622 1438 aa19.42■□□□□ 0.7
SYNE4-206ENST00000503121 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
SYNE4-206ENST00000503121 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
SYNE4-206ENST00000503121 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
SYNE4-206ENST00000503121 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
SYNE4-206ENST00000503121 LOC105371045A0A1W2PR82 267 aa19.33■□□□□ 0.68
SYNE4-206ENST00000503121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.33■□□□□ 0.68
SYNE4-206ENST00000503121 ARAP3Q8WWN8 1544 aa19.32■□□□□ 0.68
SYNE4-206ENST00000503121 NEO1Q92859 1461 aa19.32■□□□□ 0.68
SYNE4-206ENST00000503121 PCF11O94913 1555 aaKnown RBP19.31■□□□□ 0.68
SYNE4-206ENST00000503121 RAPGEF3O95398 923 aa19.3■□□□□ 0.68
SYNE4-206ENST00000503121 TROQ12816 1431 aaPredicted RBP19.29■□□□□ 0.68
SYNE4-206ENST00000503121 CEP162Q5TB80 1403 aa19.29■□□□□ 0.68
SYNE4-206ENST00000503121 CCDC18Q5T9S5 1454 aa19.28■□□□□ 0.68
SYNE4-206ENST00000503121 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
SYNE4-206ENST00000503121 KDM4FA0A1W2PPD8 638 aa19.28■□□□□ 0.68
SYNE4-206ENST00000503121 FANCAO15360 1455 aa19.28■□□□□ 0.68
SYNE4-206ENST00000503121 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
SYNE4-206ENST00000503121 AKNAQ7Z591 1439 aa19.26■□□□□ 0.67
SYNE4-206ENST00000503121 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
SYNE4-206ENST00000503121 PLCH2O75038 1416 aa19.25■□□□□ 0.67
SYNE4-206ENST00000503121 KIF14Q15058 1648 aa19.23■□□□□ 0.67
SYNE4-206ENST00000503121 EFCAB2Q5VUJ9 269 aa19.23■□□□□ 0.67
SYNE4-206ENST00000503121 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-206ENST00000503121 CFAP74Q9C0B2 1584 aa19.21■□□□□ 0.67
SYNE4-206ENST00000503121 ADGRL1O94910 1474 aa19.18■□□□□ 0.66
SYNE4-206ENST00000503121 MYO5CQ9NQX4 1742 aa19.17■□□□□ 0.66
SYNE4-206ENST00000503121 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
SYNE4-206ENST00000503121 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
SYNE4-206ENST00000503121 FRMPD1Q5SYB0 1578 aa19.14■□□□□ 0.65
SYNE4-206ENST00000503121 MTUS2Q5JR59 1369 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms