RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TSPOAP1O95153 1857 aa9.18□□□□□ -0.94
HTT-202ENST00000502820 NUP160Q12769 1436 aa9.18□□□□□ -0.94
HTT-202ENST00000502820 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
HTT-202ENST00000502820 FHAD1B1AJZ9 1412 aa9.15□□□□□ -0.94
HTT-202ENST00000502820 DISP3Q9P2K9 1392 aa9.15□□□□□ -0.94
HTT-202ENST00000502820 PLPPR3Q6T4P5 718 aa9.14□□□□□ -0.95
HTT-202ENST00000502820 ILDR2Q71H61 639 aa9.14□□□□□ -0.95
HTT-202ENST00000502820 ABCA10Q8WWZ4 1543 aa9.14□□□□□ -0.95
HTT-202ENST00000502820 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
HTT-202ENST00000502820 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
HTT-202ENST00000502820 SOCS7O14512 581 aa9.11□□□□□ -0.95
HTT-202ENST00000502820 ABCA5Q8WWZ7 1642 aa9.11□□□□□ -0.95
HTT-202ENST00000502820 ADAMTS12P58397 1594 aa9.11□□□□□ -0.95
HTT-202ENST00000502820 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
HTT-202ENST00000502820 ADCY10Q96PN6 1610 aa9.09□□□□□ -0.95
HTT-202ENST00000502820 PTPRGP23470 1445 aa9.07□□□□□ -0.96
HTT-202ENST00000502820 COL17A1Q9UMD9 1497 aaPredicted RBP9.07□□□□□ -0.96
HTT-202ENST00000502820 ASXL2Q76L83 1435 aa9.06□□□□□ -0.96
HTT-202ENST00000502820 KCNH8Q96L42 1107 aa9.05□□□□□ -0.96
HTT-202ENST00000502820 ARID4BQ4LE39 1312 aaPredicted RBP9.05□□□□□ -0.96
HTT-202ENST00000502820 HSPA2P54652 639 aa9.02□□□□□ -0.97
HTT-202ENST00000502820 PLB1Q6P1J6 1458 aa9.02□□□□□ -0.97
HTT-202ENST00000502820 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
HTT-202ENST00000502820 CERKQ8TCT0 537 aa9.01□□□□□ -0.97
HTT-202ENST00000502820 ERICH3Q5RHP9 1530 aa9□□□□□ -0.97
HTT-202ENST00000502820 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
HTT-202ENST00000502820 TEX14Q8IWB6 1497 aa8.99□□□□□ -0.97
HTT-202ENST00000502820 RUSC2Q8N2Y8 1516 aa8.99□□□□□ -0.97
HTT-202ENST00000502820 TNIKQ9UKE5 1360 aa8.99□□□□□ -0.97
HTT-202ENST00000502820 ABCC2Q92887 1545 aa8.98□□□□□ -0.97
HTT-202ENST00000502820 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
HTT-202ENST00000502820 ARID3CA6NKF2 412 aa8.97□□□□□ -0.97
HTT-202ENST00000502820 KIAA0586Q9BVV6 1533 aa8.96□□□□□ -0.97
HTT-202ENST00000502820 EPRSP07814 1512 aaKnown RBP8.95□□□□□ -0.98
HTT-202ENST00000502820 UACAQ9BZF9 1416 aa8.94□□□□□ -0.98
HTT-202ENST00000502820 CD109Q6YHK3 1445 aa8.93□□□□□ -0.98
HTT-202ENST00000502820 PTPRMP28827 1452 aa8.93□□□□□ -0.98
HTT-202ENST00000502820 GLI2P10070 1586 aa8.93□□□□□ -0.98
HTT-202ENST00000502820 PPRC1Q5VV67 1664 aaKnown RBP8.93□□□□□ -0.98
HTT-202ENST00000502820 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
HTT-202ENST00000502820 MLECQ14165 292 aa8.91□□□□□ -0.98
HTT-202ENST00000502820 CUL7Q14999 1698 aa8.9□□□□□ -0.98
HTT-202ENST00000502820 KIF21BO75037 1637 aa8.9□□□□□ -0.99
HTT-202ENST00000502820 IGF1RP08069 1367 aa8.89□□□□□ -0.99
HTT-202ENST00000502820 PCF11O94913 1555 aaKnown RBP8.87□□□□□ -0.99
HTT-202ENST00000502820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.87□□□□□ -0.99
HTT-202ENST00000502820 HNRNPUL2Q1KMD3 747 aaKnown RBP8.87□□□□□ -0.99
HTT-202ENST00000502820 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
HTT-202ENST00000502820 CARMIL1Q5VZK9 1371 aa8.86□□□□□ -0.99
HTT-202ENST00000502820 WDR7Q9Y4E6 1490 aa8.86□□□□□ -0.99
HTT-202ENST00000502820 UHRF1BP1LA0JNW5 1464 aa8.85□□□□□ -0.99
HTT-202ENST00000502820 KIF27Q86VH2 1401 aa8.85□□□□□ -0.99
HTT-202ENST00000502820 BIVM-ERCC5R4GMW8 1640 aa8.84□□□□□ -0.99
HTT-202ENST00000502820 SPATA31D1Q6ZQQ2 1576 aa8.84□□□□□ -0.99
HTT-202ENST00000502820 KDM5BQ9UGL1 1544 aa8.84□□□□□ -0.99
HTT-202ENST00000502820 FAM9AQ8IZU1 332 aaPredicted RBP8.82□□□□□ -1
HTT-202ENST00000502820 ZCCHC11Q5TAX3 1644 aaKnown RBP8.82□□□□□ -1
HTT-202ENST00000502820 MAGI3Q5TCQ9 1506 aa8.81□□□□□ -1
HTT-202ENST00000502820 P3H3Q8IVL6 736 aa8.81□□□□□ -1
HTT-202ENST00000502820 SCAF1Q9H7N4 1312 aaKnown RBP8.8□□□□□ -1
HTT-202ENST00000502820 CEBPAP49715 358 aaPredicted RBP8.8□□□□□ -1
HTT-202ENST00000502820 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
HTT-202ENST00000502820 DISP1Q96F81 1524 aa8.8□□□□□ -1
HTT-202ENST00000502820 IQGAP2Q13576 1575 aa8.79□□□□□ -1
HTT-202ENST00000502820 MADDQ8WXG6 1647 aa8.79□□□□□ -1
HTT-202ENST00000502820 CHIC1Q5VXU3 224 aa8.78□□□□□ -1
HTT-202ENST00000502820 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
HTT-202ENST00000502820 SENP3Q9H4L4 574 aaPredicted RBP8.77□□□□□ -1.01
HTT-202ENST00000502820 MYT1LQ9UL68 1186 aa8.77□□□□□ -1.01
HTT-202ENST00000502820 ADAMTSL3P82987 1691 aa8.76□□□□□ -1.01
HTT-202ENST00000502820 RANGAP1P46060 587 aaPredicted RBP8.76□□□□□ -1.01
HTT-202ENST00000502820 PHF23Q9BUL5 403 aaPredicted RBP8.76□□□□□ -1.01
HTT-202ENST00000502820 RIMS1Q86UR5 1692 aaKnown RBP8.75□□□□□ -1.01
HTT-202ENST00000502820 POGZQ7Z3K3 1410 aa8.74□□□□□ -1.01
HTT-202ENST00000502820 ARAP3Q8WWN8 1544 aa8.74□□□□□ -1.01
HTT-202ENST00000502820 PIP4K2BP78356 416 aa8.73□□□□□ -1.01
HTT-202ENST00000502820 YEATS2Q9ULM3 1422 aa8.72□□□□□ -1.01
HTT-202ENST00000502820 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
HTT-202ENST00000502820 BCORL1Q5H9F3 1711 aa8.71□□□□□ -1.01
HTT-202ENST00000502820 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.02
HTT-202ENST00000502820 KIAA0556O60303 1618 aa8.7□□□□□ -1.02
HTT-202ENST00000502820 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
HTT-202ENST00000502820 AKNAQ7Z591 1439 aa8.69□□□□□ -1.02
HTT-202ENST00000502820 FANCAO15360 1455 aa8.69□□□□□ -1.02
HTT-202ENST00000502820 UGGT2Q9NYU1 1516 aa8.69□□□□□ -1.02
HTT-202ENST00000502820 DENND4BO75064 1496 aaPredicted RBP8.68□□□□□ -1.02
HTT-202ENST00000502820 RAPGEF2Q9Y4G8 1499 aa8.68□□□□□ -1.02
HTT-202ENST00000502820 UHRF1BP1Q6BDS2 1440 aa8.67□□□□□ -1.02
HTT-202ENST00000502820 HSPA1LP34931 641 aa8.66□□□□□ -1.02
HTT-202ENST00000502820 ATP10BO94823 1461 aa8.65□□□□□ -1.02
HTT-202ENST00000502820 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
HTT-202ENST00000502820 NEO1Q92859 1461 aa8.65□□□□□ -1.02
HTT-202ENST00000502820 ZNF335Q9H4Z2 1342 aaPredicted RBP8.65□□□□□ -1.02
HTT-202ENST00000502820 PLEKHD1A6NEE1 506 aa8.65□□□□□ -1.02
HTT-202ENST00000502820 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
HTT-202ENST00000502820 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
HTT-202ENST00000502820 ABCA8O94911 1581 aa8.63□□□□□ -1.03
HTT-202ENST00000502820 FRMPD1Q5SYB0 1578 aa8.62□□□□□ -1.03
HTT-202ENST00000502820 ZFYVE16Q7Z3T8 1539 aa8.61□□□□□ -1.03
HTT-202ENST00000502820 ARHGEF40Q8TER5 1519 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms