RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 RUSC2Q8N2Y8 1516 aa38.31■■■■□ 3.72
SDHA-202ENST00000502379 CUL7Q14999 1698 aa38.27■■■■□ 3.72
SDHA-202ENST00000502379 CARMIL1Q5VZK9 1371 aa38.22■■■■□ 3.71
SDHA-202ENST00000502379 KIAA0586Q9BVV6 1533 aa38.21■■■■□ 3.71
SDHA-202ENST00000502379 NPM1P06748 294 aaKnown RBP eCLIP37.88■■■■□ 3.65
SDHA-202ENST00000502379 RAPGEF2Q9Y4G8 1499 aa37.88■■■■□ 3.65
SDHA-202ENST00000502379 ADCY10Q96PN6 1610 aa37.85■■■■□ 3.65
SDHA-202ENST00000502379 IQGAP2Q13576 1575 aa37.84■■■■□ 3.65
SDHA-202ENST00000502379 PTPRGP23470 1445 aa37.83■■■■□ 3.65
SDHA-202ENST00000502379 TTBK1Q5TCY1 1321 aaPredicted RBP37.81■■■■□ 3.64
SDHA-202ENST00000502379 CARMIL2Q6F5E8 1435 aa37.8■■■■□ 3.64
SDHA-202ENST00000502379 TNIKQ9UKE5 1360 aa37.77■■■■□ 3.64
SDHA-202ENST00000502379 KIF13AQ9H1H9 1805 aa37.74■■■■□ 3.63
SDHA-202ENST00000502379 MAPKBP1O60336 1514 aa37.72■■■■□ 3.63
SDHA-202ENST00000502379 FAM69CQ0P6D2 419 aa37.71■■■■□ 3.63
SDHA-202ENST00000502379 DISP1Q96F81 1524 aa37.7■■■■□ 3.63
SDHA-202ENST00000502379 ABCC10Q5T3U5 1492 aa37.69■■■■□ 3.62
SDHA-202ENST00000502379 UGGT2Q9NYU1 1516 aa37.63■■■■□ 3.61
SDHA-202ENST00000502379 PRXQ9BXM0 1461 aa37.58■■■■□ 3.61
SDHA-202ENST00000502379 DIP2BQ9P265 1576 aa37.56■■■■□ 3.6
SDHA-202ENST00000502379 ABCC2Q92887 1545 aa37.54■■■■□ 3.6
SDHA-202ENST00000502379 UACAQ9BZF9 1416 aa37.53■■■■□ 3.6
SDHA-202ENST00000502379 UHRF1BP1LA0JNW5 1464 aa37.51■■■■□ 3.59
SDHA-202ENST00000502379 KIAA0556O60303 1618 aa37.5■■■■□ 3.59
SDHA-202ENST00000502379 CTTNBP2Q8WZ74 1663 aa37.45■■■■□ 3.59
SDHA-202ENST00000502379 CSRNP3Q8WYN3 585 aa37.42■■■■□ 3.58
SDHA-202ENST00000502379 ASXL2Q76L83 1435 aa37.41■■■■□ 3.58
SDHA-202ENST00000502379 PLB1Q6P1J6 1458 aa37.36■■■■□ 3.57
SDHA-202ENST00000502379 GOLGA3Q08378 1498 aa37.34■■■■□ 3.57
SDHA-202ENST00000502379 KDM5BQ9UGL1 1544 aa37.34■■■■□ 3.57
SDHA-202ENST00000502379 TSPOAP1O95153 1857 aa37.29■■■■□ 3.56
SDHA-202ENST00000502379 ZCCHC11Q5TAX3 1644 aaKnown RBP37.23■■■■□ 3.55
SDHA-202ENST00000502379 GLI2P10070 1586 aa37.22■■■■□ 3.55
SDHA-202ENST00000502379 AEBP2Q6ZN18 517 aaPredicted RBP37.22■■■■□ 3.55
SDHA-202ENST00000502379 EEA1Q15075 1411 aa37.21■■■■□ 3.55
SDHA-202ENST00000502379 FAM9AQ8IZU1 332 aaPredicted RBP37.2■■■■□ 3.55
SDHA-202ENST00000502379 P3H3Q8IVL6 736 aa37.18■■■■□ 3.54
SDHA-202ENST00000502379 EPRSP07814 1512 aaKnown RBP37.17■■■■□ 3.54
SDHA-202ENST00000502379 ABCA8O94911 1581 aa37.16■■■■□ 3.54
SDHA-202ENST00000502379 KDM6BO15054 1643 aa37.15■■■■□ 3.54
SDHA-202ENST00000502379 PPRC1Q5VV67 1664 aaKnown RBP37.09■■■■□ 3.53
SDHA-202ENST00000502379 WDR7Q9Y4E6 1490 aa37.06■■■■□ 3.52
SDHA-202ENST00000502379 CHIC1Q5VXU3 224 aa37.03■■■■□ 3.52
SDHA-202ENST00000502379 MAP3K4Q9Y6R4 1608 aa37.01■■■■□ 3.52
SDHA-202ENST00000502379 RANGAP1P46060 587 aaPredicted RBP37■■■■□ 3.51
SDHA-202ENST00000502379 SAMD9Q5K651 1589 aa37■■■■□ 3.51
SDHA-202ENST00000502379 ARID3CA6NKF2 412 aa36.99■■■■□ 3.51
SDHA-202ENST00000502379 KCNH8Q96L42 1107 aa36.98■■■■□ 3.51
SDHA-202ENST00000502379 COL17A1Q9UMD9 1497 aaPredicted RBP36.91■■■■□ 3.5
SDHA-202ENST00000502379 ATP10BO94823 1461 aa36.9■■■■□ 3.5
SDHA-202ENST00000502379 TEX14Q8IWB6 1497 aa36.89■■■■□ 3.5
SDHA-202ENST00000502379 KIF21BO75037 1637 aa36.88■■■■□ 3.5
SDHA-202ENST00000502379 CD109Q6YHK3 1445 aa36.84■■■■□ 3.49
SDHA-202ENST00000502379 FHOD3Q2V2M9 1422 aa36.83■■■■□ 3.49
SDHA-202ENST00000502379 EHMT2Q96KQ7 1210 aa36.81■■■■□ 3.48
SDHA-202ENST00000502379 RAPGEF6Q8TEU7 1601 aa36.79■■■■□ 3.48
SDHA-202ENST00000502379 KDM4FA0A1W2PPD8 638 aa36.78■■■■□ 3.48
SDHA-202ENST00000502379 MAGI3Q5TCQ9 1506 aa36.77■■■■□ 3.48
SDHA-202ENST00000502379 CFAP43Q8NDM7 1665 aa36.76■■■■□ 3.47
SDHA-202ENST00000502379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.72■■■■□ 3.47
SDHA-202ENST00000502379 HNRNPUL2Q1KMD3 747 aaKnown RBP36.72■■■■□ 3.47
SDHA-202ENST00000502379 NUP153P49790 1475 aaKnown RBP36.71■■■■□ 3.47
SDHA-202ENST00000502379 UBTFP17480 764 aaKnown RBP36.71■■■■□ 3.47
SDHA-202ENST00000502379 EFCAB5A4FU69 1503 aa36.68■■■■□ 3.46
SDHA-202ENST00000502379 ABCA9Q8IUA7 1624 aa36.57■■■■□ 3.44
SDHA-202ENST00000502379 PLEKHD1A6NEE1 506 aa36.52■■■■□ 3.44
SDHA-202ENST00000502379 ADGRL1O94910 1474 aa36.48■■■■□ 3.43
SDHA-202ENST00000502379 ARAP3Q8WWN8 1544 aa36.48■■■■□ 3.43
SDHA-202ENST00000502379 ARHGAP35Q9NRY4 1499 aa36.47■■■■□ 3.43
SDHA-202ENST00000502379 PHLDB1Q86UU1 1377 aa36.42■■■■□ 3.42
SDHA-202ENST00000502379 CDK13Q14004 1512 aaKnown RBP36.39■■■■□ 3.42
SDHA-202ENST00000502379 FMN1Q68DA7 1419 aa36.38■■■■□ 3.41
SDHA-202ENST00000502379 ATP1B4Q9UN42 357 aaPredicted RBP36.38■■■■□ 3.41
SDHA-202ENST00000502379 NEO1Q92859 1461 aa36.37■■■■□ 3.41
SDHA-202ENST00000502379 RAPGEF3O95398 923 aa36.36■■■■□ 3.41
SDHA-202ENST00000502379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.31■■■■□ 3.42e-7■■□□□ 12
SDHA-202ENST00000502379 HECW1Q76N89 1606 aa36.25■■■■□ 3.39
SDHA-202ENST00000502379 TTC37Q6PGP7 1564 aa36.23■■■■□ 3.39
SDHA-202ENST00000502379 FANCAO15360 1455 aa36.2■■■■□ 3.39
SDHA-202ENST00000502379 AKNAQ7Z591 1439 aa36.2■■■■□ 3.39
SDHA-202ENST00000502379 FRMPD1Q5SYB0 1578 aa36.19■■■■□ 3.38
SDHA-202ENST00000502379 CDK11AQ9UQ88 783 aaPredicted RBP36.16■■■■□ 3.38
SDHA-202ENST00000502379 DENND4BO75064 1496 aaPredicted RBP36.14■■■■□ 3.38
SDHA-202ENST00000502379 PLCH2O75038 1416 aa36.11■■■■□ 3.37
SDHA-202ENST00000502379 CFAP74Q9C0B2 1584 aa36.08■■■■□ 3.37
SDHA-202ENST00000502379 TROQ12816 1431 aaPredicted RBP36.06■■■■□ 3.36
SDHA-202ENST00000502379 LRRIQ1Q96JM4 1722 aa36.05■■■■□ 3.36
SDHA-202ENST00000502379 CASKIN1Q8WXD9 1431 aa36.05■■■■□ 3.36
SDHA-202ENST00000502379 RICTORQ6R327 1708 aa36.04■■■■□ 3.36
SDHA-202ENST00000502379 KIF14Q15058 1648 aa36.03■■■■□ 3.36
SDHA-202ENST00000502379 PCF11O94913 1555 aaKnown RBP36.01■■■■□ 3.35
SDHA-202ENST00000502379 CLIP1P30622 1438 aa36■■■■□ 3.35
SDHA-202ENST00000502379 EFCAB2Q5VUJ9 269 aa35.99■■■■□ 3.35
SDHA-202ENST00000502379 SCAPERQ9BY12 1400 aa35.98■■■■□ 3.35
SDHA-202ENST00000502379 ARID4BQ4LE39 1312 aaPredicted RBP35.97■■■■□ 3.35
SDHA-202ENST00000502379 ARHGEF40Q8TER5 1519 aa35.94■■■■□ 3.34
SDHA-202ENST00000502379 MYO5CQ9NQX4 1742 aa35.93■■■■□ 3.34
SDHA-202ENST00000502379 CCDC18Q5T9S5 1454 aa35.92■■■■□ 3.34
SDHA-202ENST00000502379 ZMYM4Q5VZL5 1548 aa35.92■■■■□ 3.34
SDHA-202ENST00000502379 ADAMTSL3P82987 1691 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms