RNA–Protein interactions for RNA: ENST00000499601.2

AC008393.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008393.1, Length 1,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008393.1-201ENST00000499601 CTTNBP2Q8WZ74 1663 aa29.75■■■□□ 2.35
AC008393.1-201ENST00000499601 NUP160Q12769 1436 aa29.68■■■□□ 2.34
AC008393.1-201ENST00000499601 CEP170Q5SW79 1584 aa29.66■■■□□ 2.34
AC008393.1-201ENST00000499601 KIAA0586Q9BVV6 1533 aa29.62■■■□□ 2.33
AC008393.1-201ENST00000499601 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
AC008393.1-201ENST00000499601 IQGAP2Q13576 1575 aa29.61■■■□□ 2.33
AC008393.1-201ENST00000499601 CLIP1P30622 1438 aa29.54■■■□□ 2.32
AC008393.1-201ENST00000499601 RANGAP1P46060 587 aaPredicted RBP29.48■■■□□ 2.31
AC008393.1-201ENST00000499601 EFCAB5A4FU69 1503 aa29.46■■■□□ 2.31
AC008393.1-201ENST00000499601 UGGT2Q9NYU1 1516 aa29.46■■■□□ 2.31
AC008393.1-201ENST00000499601 CLASP1Q7Z460 1538 aa29.44■■■□□ 2.3
AC008393.1-201ENST00000499601 ARHGAP35Q9NRY4 1499 aa29.42■■■□□ 2.3
AC008393.1-201ENST00000499601 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
AC008393.1-201ENST00000499601 SAMD9Q5K651 1589 aa29.4■■■□□ 2.3
AC008393.1-201ENST00000499601 JPH4Q96JJ6 628 aa29.38■■■□□ 2.29
AC008393.1-201ENST00000499601 SHROOM2Q13796 1616 aa29.35■■■□□ 2.29
AC008393.1-201ENST00000499601 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
AC008393.1-201ENST00000499601 CARMIL2Q6F5E8 1435 aa29.3■■■□□ 2.28
AC008393.1-201ENST00000499601 KIAA0556O60303 1618 aa29.3■■■□□ 2.28
AC008393.1-201ENST00000499601 DISP1Q96F81 1524 aa29.3■■■□□ 2.28
AC008393.1-201ENST00000499601 FHOD3Q2V2M9 1422 aa29.26■■■□□ 2.27
AC008393.1-201ENST00000499601 PRG4Q92954 1404 aaPredicted RBP29.26■■■□□ 2.27
AC008393.1-201ENST00000499601 P3H3Q8IVL6 736 aa29.25■■■□□ 2.27
AC008393.1-201ENST00000499601 VPS8Q8N3P4 1428 aa29.22■■■□□ 2.27
AC008393.1-201ENST00000499601 FMN1Q68DA7 1419 aa29.18■■■□□ 2.26
AC008393.1-201ENST00000499601 ERCC6L2Q5T890 1561 aa29.1■■■□□ 2.25
AC008393.1-201ENST00000499601 PTPRGP23470 1445 aa29.03■■■□□ 2.24
AC008393.1-201ENST00000499601 CASKIN1Q8WXD9 1431 aa29.03■■■□□ 2.24
AC008393.1-201ENST00000499601 FYCO1Q9BQS8 1478 aa29.02■■■□□ 2.24
AC008393.1-201ENST00000499601 PCF11O94913 1555 aaKnown RBP29.02■■■□□ 2.24
AC008393.1-201ENST00000499601 TTBK1Q5TCY1 1321 aaPredicted RBP28.99■■■□□ 2.23
AC008393.1-201ENST00000499601 RAPGEF6Q8TEU7 1601 aa28.95■■■□□ 2.23
AC008393.1-201ENST00000499601 HECW1Q76N89 1606 aa28.94■■■□□ 2.22
AC008393.1-201ENST00000499601 ARHGEF11O15085 1522 aa28.93■■■□□ 2.22
AC008393.1-201ENST00000499601 APLP2Q06481 763 aa28.92■■■□□ 2.22
AC008393.1-201ENST00000499601 ABCA8O94911 1581 aa28.91■■■□□ 2.22
AC008393.1-201ENST00000499601 PLB1Q6P1J6 1458 aa28.9■■■□□ 2.22
AC008393.1-201ENST00000499601 ATP1B4Q9UN42 357 aaPredicted RBP28.89■■■□□ 2.22
AC008393.1-201ENST00000499601 UACAQ9BZF9 1416 aa28.86■■■□□ 2.21
AC008393.1-201ENST00000499601 MAP3K1Q13233 1512 aa28.86■■■□□ 2.21
AC008393.1-201ENST00000499601 CCDC18Q5T9S5 1454 aa28.84■■■□□ 2.21
AC008393.1-201ENST00000499601 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
AC008393.1-201ENST00000499601 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
AC008393.1-201ENST00000499601 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
AC008393.1-201ENST00000499601 NUP153P49790 1475 aaKnown RBP28.83■■■□□ 2.21
AC008393.1-201ENST00000499601 CFAP43Q8NDM7 1665 aa28.81■■■□□ 2.2
AC008393.1-201ENST00000499601 TIAM1Q13009 1591 aa28.81■■■□□ 2.2
AC008393.1-201ENST00000499601 ABCC2Q92887 1545 aa28.81■■■□□ 2.2
AC008393.1-201ENST00000499601 LRRIQ1Q96JM4 1722 aa28.8■■■□□ 2.2
AC008393.1-201ENST00000499601 EPRSP07814 1512 aaKnown RBP28.79■■■□□ 2.2
AC008393.1-201ENST00000499601 UHRF1BP1LA0JNW5 1464 aa28.79■■■□□ 2.2
AC008393.1-201ENST00000499601 CDK13Q14004 1512 aaKnown RBP28.71■■■□□ 2.19
AC008393.1-201ENST00000499601 ADCY10Q96PN6 1610 aa28.69■■■□□ 2.18
AC008393.1-201ENST00000499601 ATP10BO94823 1461 aa28.67■■■□□ 2.18
AC008393.1-201ENST00000499601 ARID3CA6NKF2 412 aa28.66■■■□□ 2.18
AC008393.1-201ENST00000499601 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
AC008393.1-201ENST00000499601 KDM5BQ9UGL1 1544 aa28.65■■■□□ 2.18
AC008393.1-201ENST00000499601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.65■■■□□ 2.18
AC008393.1-201ENST00000499601 HNRNPUL2Q1KMD3 747 aaKnown RBP28.65■■■□□ 2.18
AC008393.1-201ENST00000499601 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.17
AC008393.1-201ENST00000499601 CDK11AQ9UQ88 783 aaPredicted RBP28.64■■■□□ 2.17
AC008393.1-201ENST00000499601 PPARGC1BQ86YN6 1023 aaKnown RBP28.62■■■□□ 2.17
AC008393.1-201ENST00000499601 MTUS2Q5JR59 1369 aa28.62■■■□□ 2.17
AC008393.1-201ENST00000499601 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
AC008393.1-201ENST00000499601 ZCCHC11Q5TAX3 1644 aaKnown RBP28.6■■■□□ 2.17
AC008393.1-201ENST00000499601 CYB5RLQ6IPT4 315 aa28.59■■■□□ 2.17
AC008393.1-201ENST00000499601 MAGI3Q5TCQ9 1506 aa28.56■■■□□ 2.16
AC008393.1-201ENST00000499601 PLEKHD1A6NEE1 506 aa28.53■■■□□ 2.16
AC008393.1-201ENST00000499601 NPM1P06748 294 aaKnown RBP eCLIP28.53■■■□□ 2.16
AC008393.1-201ENST00000499601 TROQ12816 1431 aaPredicted RBP28.52■■■□□ 2.16
AC008393.1-201ENST00000499601 SUPT6HQ7KZ85 1726 aaKnown RBP28.5■■■□□ 2.15
AC008393.1-201ENST00000499601 NCOA2Q15596 1464 aa28.42■■■□□ 2.14
AC008393.1-201ENST00000499601 KIF14Q15058 1648 aa28.41■■■□□ 2.14
AC008393.1-201ENST00000499601 WDR7Q9Y4E6 1490 aa28.39■■■□□ 2.13
AC008393.1-201ENST00000499601 ASXL2Q76L83 1435 aa28.38■■■□□ 2.13
AC008393.1-201ENST00000499601 MAPKBP1O60336 1514 aa28.36■■■□□ 2.13
AC008393.1-201ENST00000499601 PHLDB1Q86UU1 1377 aa28.33■■■□□ 2.13
AC008393.1-201ENST00000499601 TRIM26Q12899 539 aaPredicted RBP28.29■■■□□ 2.12
AC008393.1-201ENST00000499601 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
AC008393.1-201ENST00000499601 MYOM3Q5VTT5 1437 aa28.28■■■□□ 2.12
AC008393.1-201ENST00000499601 CCNB3Q8WWL7 1395 aa28.28■■■□□ 2.12
AC008393.1-201ENST00000499601 KCNH8Q96L42 1107 aa28.27■■■□□ 2.12
AC008393.1-201ENST00000499601 ITSN2Q9NZM3 1697 aa28.25■■■□□ 2.11
AC008393.1-201ENST00000499601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.25■■■□□ 2.11
AC008393.1-201ENST00000499601 RRBP1Q9P2E9 1410 aaKnown RBP28.25■■■□□ 2.11
AC008393.1-201ENST00000499601 AEBP2Q6ZN18 517 aaPredicted RBP28.24■■■□□ 2.11
AC008393.1-201ENST00000499601 TTC37Q6PGP7 1564 aa28.21■■■□□ 2.11
AC008393.1-201ENST00000499601 FGD6Q6ZV73 1430 aa28.21■■■□□ 2.11
AC008393.1-201ENST00000499601 MIA2Q96PC5 1412 aa28.21■■■□□ 2.11
AC008393.1-201ENST00000499601 GPATCH8Q9UKJ3 1502 aaKnown RBP28.2■■■□□ 2.1
AC008393.1-201ENST00000499601 ABCA9Q8IUA7 1624 aa28.19■■■□□ 2.1
AC008393.1-201ENST00000499601 CDC42BPAQ5VT25 1732 aa28.19■■■□□ 2.1
AC008393.1-201ENST00000499601 MYO5CQ9NQX4 1742 aa28.16■■■□□ 2.1
AC008393.1-201ENST00000499601 PREX2Q70Z35 1606 aa28.15■■■□□ 2.1
AC008393.1-201ENST00000499601 PTPN23Q9H3S7 1636 aa28.13■■■□□ 2.09
AC008393.1-201ENST00000499601 CFDP1Q9UEE9 299 aaPredicted RBP28.12■■■□□ 2.09
AC008393.1-201ENST00000499601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.12■■■□□ 2.09
AC008393.1-201ENST00000499601 GLI2P10070 1586 aa28.11■■■□□ 2.09
AC008393.1-201ENST00000499601 TCOF1Q13428 1488 aaKnown RBP28.1■■■□□ 2.09
AC008393.1-201ENST00000499601 CDC42BPBQ9Y5S2 1711 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms