RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
FXR1-222ENST00000498658 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
FXR1-222ENST00000498658 FOXD1Q16676 465 aa17.78■□□□□ 0.44
FXR1-222ENST00000498658 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
FXR1-222ENST00000498658 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
FXR1-222ENST00000498658 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
FXR1-222ENST00000498658 KIAA0586Q9BVV6 1533 aa17.73■□□□□ 0.43
FXR1-222ENST00000498658 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
FXR1-222ENST00000498658 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
FXR1-222ENST00000498658 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
FXR1-222ENST00000498658 EEA1Q15075 1411 aa17.63■□□□□ 0.41
FXR1-222ENST00000498658 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
FXR1-222ENST00000498658 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
FXR1-222ENST00000498658 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.41
FXR1-222ENST00000498658 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.4
FXR1-222ENST00000498658 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
FXR1-222ENST00000498658 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.39
FXR1-222ENST00000498658 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
FXR1-222ENST00000498658 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
FXR1-222ENST00000498658 PTPRGP23470 1445 aa17.49■□□□□ 0.39
FXR1-222ENST00000498658 NPM1P06748 294 aaKnown RBP eCLIP17.49■□□□□ 0.39
FXR1-222ENST00000498658 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
FXR1-222ENST00000498658 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
FXR1-222ENST00000498658 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
FXR1-222ENST00000498658 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
FXR1-222ENST00000498658 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
FXR1-222ENST00000498658 TTBK1Q5TCY1 1321 aaPredicted RBP17.4■□□□□ 0.38
FXR1-222ENST00000498658 KIF21BO75037 1637 aa17.39■□□□□ 0.37
FXR1-222ENST00000498658 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
FXR1-222ENST00000498658 UHRF1BP1LA0JNW5 1464 aa17.37■□□□□ 0.37
FXR1-222ENST00000498658 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
FXR1-222ENST00000498658 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
FXR1-222ENST00000498658 ABCC10Q5T3U5 1492 aa17.3■□□□□ 0.36
FXR1-222ENST00000498658 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
FXR1-222ENST00000498658 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
FXR1-222ENST00000498658 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
FXR1-222ENST00000498658 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
FXR1-222ENST00000498658 PLB1Q6P1J6 1458 aa17.26■□□□□ 0.35
FXR1-222ENST00000498658 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
FXR1-222ENST00000498658 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
FXR1-222ENST00000498658 ABCA8O94911 1581 aa17.23■□□□□ 0.35
FXR1-222ENST00000498658 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
FXR1-222ENST00000498658 ASXL2Q76L83 1435 aa17.23■□□□□ 0.35
FXR1-222ENST00000498658 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
FXR1-222ENST00000498658 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
FXR1-222ENST00000498658 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
FXR1-222ENST00000498658 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
FXR1-222ENST00000498658 GLI2P10070 1586 aa17.16■□□□□ 0.34
FXR1-222ENST00000498658 FHOD3Q2V2M9 1422 aa17.14■□□□□ 0.33
FXR1-222ENST00000498658 WDR7Q9Y4E6 1490 aa17.14■□□□□ 0.33
FXR1-222ENST00000498658 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
FXR1-222ENST00000498658 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
FXR1-222ENST00000498658 ATP10BO94823 1461 aa17.1■□□□□ 0.33
FXR1-222ENST00000498658 ADRA2BP18089 450 aa17.09■□□□□ 0.33
FXR1-222ENST00000498658 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
FXR1-222ENST00000498658 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
FXR1-222ENST00000498658 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
FXR1-222ENST00000498658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
FXR1-222ENST00000498658 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
FXR1-222ENST00000498658 TSPOAP1O95153 1857 aa17.07■□□□□ 0.32
FXR1-222ENST00000498658 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
FXR1-222ENST00000498658 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
FXR1-222ENST00000498658 MAP3K4Q9Y6R4 1608 aa17.05■□□□□ 0.32
FXR1-222ENST00000498658 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
FXR1-222ENST00000498658 TEX14Q8IWB6 1497 aa17.04■□□□□ 0.32
FXR1-222ENST00000498658 CFAP43Q8NDM7 1665 aa17.01■□□□□ 0.31
FXR1-222ENST00000498658 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
FXR1-222ENST00000498658 KDM6BO15054 1643 aa17■□□□□ 0.31
FXR1-222ENST00000498658 CD109Q6YHK3 1445 aa17■□□□□ 0.31
FXR1-222ENST00000498658 PPRC1Q5VV67 1664 aaKnown RBP16.99■□□□□ 0.31
FXR1-222ENST00000498658 MAGI3Q5TCQ9 1506 aa16.98■□□□□ 0.31
FXR1-222ENST00000498658 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
FXR1-222ENST00000498658 ATP1B4Q9UN42 357 aaPredicted RBP16.97■□□□□ 0.31
FXR1-222ENST00000498658 CLIP1P30622 1438 aa16.96■□□□□ 0.31
FXR1-222ENST00000498658 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
FXR1-222ENST00000498658 ABCA9Q8IUA7 1624 aa16.94■□□□□ 0.3
FXR1-222ENST00000498658 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
FXR1-222ENST00000498658 CASKIN1Q8WXD9 1431 aa16.91■□□□□ 0.3
FXR1-222ENST00000498658 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
FXR1-222ENST00000498658 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
FXR1-222ENST00000498658 FYCO1Q9BQS8 1478 aa16.87■□□□□ 0.29
FXR1-222ENST00000498658 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
FXR1-222ENST00000498658 NEO1Q92859 1461 aa16.85■□□□□ 0.29
FXR1-222ENST00000498658 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
FXR1-222ENST00000498658 COL17A1Q9UMD9 1497 aaPredicted RBP16.84■□□□□ 0.29
FXR1-222ENST00000498658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.84■□□□□ 0.29
FXR1-222ENST00000498658 TROQ12816 1431 aaPredicted RBP16.83■□□□□ 0.28
FXR1-222ENST00000498658 ARAP3Q8WWN8 1544 aa16.83■□□□□ 0.28
FXR1-222ENST00000498658 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
FXR1-222ENST00000498658 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
FXR1-222ENST00000498658 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
FXR1-222ENST00000498658 LRRIQ1Q96JM4 1722 aa16.8■□□□□ 0.28
FXR1-222ENST00000498658 KIF14Q15058 1648 aa16.8■□□□□ 0.28
FXR1-222ENST00000498658 TTC37Q6PGP7 1564 aa16.78■□□□□ 0.28
FXR1-222ENST00000498658 FANCAO15360 1455 aa16.78■□□□□ 0.28
FXR1-222ENST00000498658 PLCH2O75038 1416 aa16.78■□□□□ 0.28
FXR1-222ENST00000498658 AKNAQ7Z591 1439 aa16.75■□□□□ 0.27
FXR1-222ENST00000498658 MYO5CQ9NQX4 1742 aa16.74■□□□□ 0.27
FXR1-222ENST00000498658 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
FXR1-222ENST00000498658 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms