RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 SHROOM2Q13796 1616 aa29.19■■■□□ 2.26
ECHDC2-220ENST00000498544 KIAA0586Q9BVV6 1533 aa29.16■■■□□ 2.26
ECHDC2-220ENST00000498544 IQGAP2Q13576 1575 aa29.13■■■□□ 2.25
ECHDC2-220ENST00000498544 RIMBP3CA6NJZ7 1639 aa29.06■■■□□ 2.24
ECHDC2-220ENST00000498544 RIMBP3BA6NNM3 1639 aa29.06■■■□□ 2.24
ECHDC2-220ENST00000498544 RIMBP3Q9UFD9 1639 aa29.06■■■□□ 2.24
ECHDC2-220ENST00000498544 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
ECHDC2-220ENST00000498544 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
ECHDC2-220ENST00000498544 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.23
ECHDC2-220ENST00000498544 JPH4Q96JJ6 628 aa28.94■■■□□ 2.22
ECHDC2-220ENST00000498544 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
ECHDC2-220ENST00000498544 PRG4Q92954 1404 aaPredicted RBP28.92■■■□□ 2.22
ECHDC2-220ENST00000498544 KIAA0556O60303 1618 aa28.84■■■□□ 2.21
ECHDC2-220ENST00000498544 CARMIL2Q6F5E8 1435 aa28.83■■■□□ 2.21
ECHDC2-220ENST00000498544 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
ECHDC2-220ENST00000498544 DISP1Q96F81 1524 aa28.83■■■□□ 2.21
ECHDC2-220ENST00000498544 SAMD9Q5K651 1589 aa28.8■■■□□ 2.2
ECHDC2-220ENST00000498544 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
ECHDC2-220ENST00000498544 EHMT2Q96KQ7 1210 aa28.78■■■□□ 2.2
ECHDC2-220ENST00000498544 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
ECHDC2-220ENST00000498544 TNIKQ9UKE5 1360 aa28.69■■■□□ 2.18
ECHDC2-220ENST00000498544 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
ECHDC2-220ENST00000498544 PTPRGP23470 1445 aa28.6■■■□□ 2.17
ECHDC2-220ENST00000498544 ARHGAP35Q9NRY4 1499 aa28.56■■■□□ 2.16
ECHDC2-220ENST00000498544 RANGAP1P46060 587 aaPredicted RBP28.55■■■□□ 2.16
ECHDC2-220ENST00000498544 ADCY10Q96PN6 1610 aa28.54■■■□□ 2.16
ECHDC2-220ENST00000498544 LOC105371045A0A1W2PR82 267 aa28.52■■■□□ 2.16
ECHDC2-220ENST00000498544 FHOD3Q2V2M9 1422 aa28.51■■■□□ 2.15
ECHDC2-220ENST00000498544 CLIP1P30622 1438 aa28.5■■■□□ 2.15
ECHDC2-220ENST00000498544 ABCA8O94911 1581 aa28.48■■■□□ 2.15
ECHDC2-220ENST00000498544 ABCC2Q92887 1545 aa28.48■■■□□ 2.15
ECHDC2-220ENST00000498544 CEP162Q5TB80 1403 aa28.47■■■□□ 2.15
ECHDC2-220ENST00000498544 P3H3Q8IVL6 736 aa28.47■■■□□ 2.15
ECHDC2-220ENST00000498544 UHRF1BP1LA0JNW5 1464 aa28.46■■■□□ 2.15
ECHDC2-220ENST00000498544 TTBK1Q5TCY1 1321 aaPredicted RBP28.45■■■□□ 2.15
ECHDC2-220ENST00000498544 UACAQ9BZF9 1416 aa28.45■■■□□ 2.15
ECHDC2-220ENST00000498544 RAPGEF6Q8TEU7 1601 aa28.43■■■□□ 2.14
ECHDC2-220ENST00000498544 PLB1Q6P1J6 1458 aa28.42■■■□□ 2.14
ECHDC2-220ENST00000498544 FMN1Q68DA7 1419 aa28.39■■■□□ 2.14
ECHDC2-220ENST00000498544 ZCCHC11Q5TAX3 1644 aaKnown RBP28.34■■■□□ 2.13
ECHDC2-220ENST00000498544 KDM5BQ9UGL1 1544 aa28.32■■■□□ 2.12
ECHDC2-220ENST00000498544 HECW1Q76N89 1606 aa28.31■■■□□ 2.12
ECHDC2-220ENST00000498544 PCF11O94913 1555 aaKnown RBP28.28■■■□□ 2.12
ECHDC2-220ENST00000498544 MAPKBP1O60336 1514 aa28.28■■■□□ 2.12
ECHDC2-220ENST00000498544 NUP153P49790 1475 aaKnown RBP28.27■■■□□ 2.12
ECHDC2-220ENST00000498544 NPM1P06748 294 aaKnown RBP eCLIP28.24■■■□□ 2.11
ECHDC2-220ENST00000498544 LRRIQ1Q96JM4 1722 aa28.22■■■□□ 2.11
ECHDC2-220ENST00000498544 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
ECHDC2-220ENST00000498544 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.11
ECHDC2-220ENST00000498544 ATP10BO94823 1461 aa28.16■■■□□ 2.1
ECHDC2-220ENST00000498544 EPRSP07814 1512 aaKnown RBP28.13■■■□□ 2.09
ECHDC2-220ENST00000498544 ASXL2Q76L83 1435 aa28.12■■■□□ 2.09
ECHDC2-220ENST00000498544 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
ECHDC2-220ENST00000498544 KIF13AQ9H1H9 1805 aa28.12■■■□□ 2.09
ECHDC2-220ENST00000498544 CCDC18Q5T9S5 1454 aa28.1■■■□□ 2.09
ECHDC2-220ENST00000498544 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
ECHDC2-220ENST00000498544 TRHP20396 242 aaPredicted RBP28.09■■■□□ 2.09
ECHDC2-220ENST00000498544 WDR7Q9Y4E6 1490 aa28.08■■■□□ 2.09
ECHDC2-220ENST00000498544 DIP2BQ9P265 1576 aa28.08■■■□□ 2.09
ECHDC2-220ENST00000498544 ABCC10Q5T3U5 1492 aa28.04■■■□□ 2.08
ECHDC2-220ENST00000498544 ARID3CA6NKF2 412 aa28.04■■■□□ 2.08
ECHDC2-220ENST00000498544 ATP1B4Q9UN42 357 aaPredicted RBP28.03■■■□□ 2.08
ECHDC2-220ENST00000498544 CFAP43Q8NDM7 1665 aa28.02■■■□□ 2.08
ECHDC2-220ENST00000498544 GLI2P10070 1586 aa27.99■■■□□ 2.07
ECHDC2-220ENST00000498544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.98■■■□□ 2.07
ECHDC2-220ENST00000498544 HNRNPUL2Q1KMD3 747 aaKnown RBP27.98■■■□□ 2.07
ECHDC2-220ENST00000498544 TIAM1Q13009 1591 aa27.92■■■□□ 2.06
ECHDC2-220ENST00000498544 MAP3K4Q9Y6R4 1608 aa27.92■■■□□ 2.06
ECHDC2-220ENST00000498544 CDK11AQ9UQ88 783 aaPredicted RBP27.91■■■□□ 2.06
ECHDC2-220ENST00000498544 ABCA9Q8IUA7 1624 aa27.9■■■□□ 2.06
ECHDC2-220ENST00000498544 PLEKHD1A6NEE1 506 aa27.9■■■□□ 2.06
ECHDC2-220ENST00000498544 MAP3K1Q13233 1512 aa27.89■■■□□ 2.06
ECHDC2-220ENST00000498544 KIF14Q15058 1648 aa27.89■■■□□ 2.05
ECHDC2-220ENST00000498544 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
ECHDC2-220ENST00000498544 TROQ12816 1431 aaPredicted RBP27.87■■■□□ 2.05
ECHDC2-220ENST00000498544 TSPOAP1O95153 1857 aa27.86■■■□□ 2.05
ECHDC2-220ENST00000498544 FAM69CQ0P6D2 419 aa27.85■■■□□ 2.05
ECHDC2-220ENST00000498544 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
ECHDC2-220ENST00000498544 EHBP1L1Q8N3D4 1523 aa27.83■■■□□ 2.05
ECHDC2-220ENST00000498544 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
ECHDC2-220ENST00000498544 KCNH8Q96L42 1107 aa27.81■■■□□ 2.04
ECHDC2-220ENST00000498544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.81■■■□□ 2.04
ECHDC2-220ENST00000498544 TTC37Q6PGP7 1564 aa27.81■■■□□ 2.04
ECHDC2-220ENST00000498544 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
ECHDC2-220ENST00000498544 MTUS2Q5JR59 1369 aa27.76■■■□□ 2.03
ECHDC2-220ENST00000498544 SUPT6HQ7KZ85 1726 aaKnown RBP27.74■■■□□ 2.03
ECHDC2-220ENST00000498544 LRRC9Q6ZRR7 1453 aa27.73■■■□□ 2.03
ECHDC2-220ENST00000498544 CD109Q6YHK3 1445 aa27.72■■■□□ 2.03
ECHDC2-220ENST00000498544 APLP2Q06481 763 aa27.7■■■□□ 2.02
ECHDC2-220ENST00000498544 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.02
ECHDC2-220ENST00000498544 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.02
ECHDC2-220ENST00000498544 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
ECHDC2-220ENST00000498544 CFAP74Q9C0B2 1584 aa27.67■■■□□ 2.02
ECHDC2-220ENST00000498544 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
ECHDC2-220ENST00000498544 ITSN2Q9NZM3 1697 aa27.65■■■□□ 2.02
ECHDC2-220ENST00000498544 CDC42BPBQ9Y5S2 1711 aa27.65■■■□□ 2.02
ECHDC2-220ENST00000498544 PLCH2O75038 1416 aa27.59■■■□□ 2.01
ECHDC2-220ENST00000498544 NCOA2Q15596 1464 aa27.59■■■□□ 2.01
ECHDC2-220ENST00000498544 NEO1Q92859 1461 aa27.57■■■□□ 2
ECHDC2-220ENST00000498544 KANK4Q5T7N3 995 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms