RNA–Protein interactions for RNA: ENST00000498374.1

ATXN1-210, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-210ENST00000498374 CECR2Q9BXF3 1484 aa11.65□□□□□ -0.54
ATXN1-210ENST00000498374 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
ATXN1-210ENST00000498374 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.55
ATXN1-210ENST00000498374 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
ATXN1-210ENST00000498374 SMARCA4P51532 1647 aa11.64□□□□□ -0.55
ATXN1-210ENST00000498374 KDM2AQ9Y2K7 1162 aa11.6□□□□□ -0.55
ATXN1-210ENST00000498374 LOC105371045A0A1W2PR82 267 aa11.59□□□□□ -0.55
ATXN1-210ENST00000498374 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
ATXN1-210ENST00000498374 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
ATXN1-210ENST00000498374 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
ATXN1-210ENST00000498374 EEA1Q15075 1411 aa11.52□□□□□ -0.57
ATXN1-210ENST00000498374 EVX2Q03828 476 aa11.51□□□□□ -0.57
ATXN1-210ENST00000498374 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
ATXN1-210ENST00000498374 FBLN2P98095 1184 aa11.49□□□□□ -0.57
ATXN1-210ENST00000498374 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
ATXN1-210ENST00000498374 SPDYE6P0CI01 402 aa11.48□□□□□ -0.57
ATXN1-210ENST00000498374 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
ATXN1-210ENST00000498374 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
ATXN1-210ENST00000498374 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
ATXN1-210ENST00000498374 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
ATXN1-210ENST00000498374 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
ATXN1-210ENST00000498374 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
ATXN1-210ENST00000498374 BICRAQ9NZM4 1560 aa11.38□□□□□ -0.59
ATXN1-210ENST00000498374 SPDYE1Q8NFV5 336 aaPredicted RBP11.38□□□□□ -0.59
ATXN1-210ENST00000498374 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
ATXN1-210ENST00000498374 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
ATXN1-210ENST00000498374 KIF21BO75037 1637 aa11.35□□□□□ -0.59
ATXN1-210ENST00000498374 TNIKQ9UKE5 1360 aa11.34□□□□□ -0.59
ATXN1-210ENST00000498374 FAM9AQ8IZU1 332 aaPredicted RBP11.32□□□□□ -0.6
ATXN1-210ENST00000498374 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
ATXN1-210ENST00000498374 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
ATXN1-210ENST00000498374 GABBR2O75899 941 aa11.3□□□□□ -0.6
ATXN1-210ENST00000498374 LHX8Q68G74 356 aa11.3□□□□□ -0.6
ATXN1-210ENST00000498374 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
ATXN1-210ENST00000498374 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
ATXN1-210ENST00000498374 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.6
ATXN1-210ENST00000498374 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
ATXN1-210ENST00000498374 CEP164Q9UPV0 1460 aa11.27□□□□□ -0.6
ATXN1-210ENST00000498374 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
ATXN1-210ENST00000498374 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
ATXN1-210ENST00000498374 PLSCR2Q9NRY7 297 aa11.27□□□□□ -0.61
ATXN1-210ENST00000498374 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
ATXN1-210ENST00000498374 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
ATXN1-210ENST00000498374 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
ATXN1-210ENST00000498374 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
ATXN1-210ENST00000498374 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
ATXN1-210ENST00000498374 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
ATXN1-210ENST00000498374 NBR1Q14596 966 aa11.22□□□□□ -0.61
ATXN1-210ENST00000498374 ATAD2BQ9ULI0 1458 aa11.22□□□□□ -0.61
ATXN1-210ENST00000498374 SYNJ1O43426 1573 aa11.22□□□□□ -0.61
ATXN1-210ENST00000498374 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
ATXN1-210ENST00000498374 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
ATXN1-210ENST00000498374 HMGXB3Q12766 1538 aa11.2□□□□□ -0.62
ATXN1-210ENST00000498374 SOGA1O94964 1423 aa11.2□□□□□ -0.62
ATXN1-210ENST00000498374 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
ATXN1-210ENST00000498374 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
ATXN1-210ENST00000498374 PRDM2Q13029 1718 aa11.19□□□□□ -0.62
ATXN1-210ENST00000498374 ERICH3Q5RHP9 1530 aa11.17□□□□□ -0.62
ATXN1-210ENST00000498374 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
ATXN1-210ENST00000498374 PKD2Q13563 968 aa11.15□□□□□ -0.62
ATXN1-210ENST00000498374 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
ATXN1-210ENST00000498374 CLCN6P51797 869 aa11.12□□□□□ -0.63
ATXN1-210ENST00000498374 MYT1Q01538 1121 aa11.12□□□□□ -0.63
ATXN1-210ENST00000498374 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
ATXN1-210ENST00000498374 CCER1Q8TC90 406 aaPredicted RBP11.1□□□□□ -0.63
ATXN1-210ENST00000498374 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
ATXN1-210ENST00000498374 CLIP1P30622 1438 aa11.09□□□□□ -0.63
ATXN1-210ENST00000498374 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
ATXN1-210ENST00000498374 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
ATXN1-210ENST00000498374 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
ATXN1-210ENST00000498374 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
ATXN1-210ENST00000498374 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
ATXN1-210ENST00000498374 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
ATXN1-210ENST00000498374 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.64
ATXN1-210ENST00000498374 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
ATXN1-210ENST00000498374 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
ATXN1-210ENST00000498374 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
ATXN1-210ENST00000498374 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
ATXN1-210ENST00000498374 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
ATXN1-210ENST00000498374 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
ATXN1-210ENST00000498374 CLSPNQ9HAW4 1339 aa10.99□□□□□ -0.65
ATXN1-210ENST00000498374 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
ATXN1-210ENST00000498374 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
ATXN1-210ENST00000498374 CFTRP13569 1480 aa10.97□□□□□ -0.65
ATXN1-210ENST00000498374 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
ATXN1-210ENST00000498374 KIF27Q86VH2 1401 aa10.96□□□□□ -0.66
ATXN1-210ENST00000498374 CUX1P39880 1505 aa10.94□□□□□ -0.66
ATXN1-210ENST00000498374 DIEXFQ68CQ4 756 aaKnown RBP10.93□□□□□ -0.66
ATXN1-210ENST00000498374 MAP3K1Q13233 1512 aa10.92□□□□□ -0.66
ATXN1-210ENST00000498374 ARAP1Q96P48 1450 aa10.92□□□□□ -0.66
ATXN1-210ENST00000498374 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
ATXN1-210ENST00000498374 CUX2O14529 1486 aa10.9□□□□□ -0.66
ATXN1-210ENST00000498374 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
ATXN1-210ENST00000498374 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
ATXN1-210ENST00000498374 PROM2Q8N271 834 aa10.88□□□□□ -0.67
ATXN1-210ENST00000498374 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
ATXN1-210ENST00000498374 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
ATXN1-210ENST00000498374 CFAP43Q8NDM7 1665 aa10.85□□□□□ -0.67
ATXN1-210ENST00000498374 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
ATXN1-210ENST00000498374 CUL7Q14999 1698 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms