RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 RAPGEF2Q9Y4G8 1499 aa18.81■□□□□ 0.6
CTTN-208ENST00000498223 EHMT2Q96KQ7 1210 aa18.79■□□□□ 0.6
CTTN-208ENST00000498223 KIF21BO75037 1637 aa18.76■□□□□ 0.59
CTTN-208ENST00000498223 PRXQ9BXM0 1461 aa18.76■□□□□ 0.59
CTTN-208ENST00000498223 NUP160Q12769 1436 aa18.74■□□□□ 0.59
CTTN-208ENST00000498223 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
CTTN-208ENST00000498223 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
CTTN-208ENST00000498223 CTTNBP2Q8WZ74 1663 aa18.72■□□□□ 0.59
CTTN-208ENST00000498223 GOLGA3Q08378 1498 aa18.67■□□□□ 0.58
CTTN-208ENST00000498223 UBTFP17480 764 aaKnown RBP18.67■□□□□ 0.58
CTTN-208ENST00000498223 IQGAP2Q13576 1575 aa18.61■□□□□ 0.57
CTTN-208ENST00000498223 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
CTTN-208ENST00000498223 KIAA0586Q9BVV6 1533 aa18.61■□□□□ 0.57
CTTN-208ENST00000498223 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
CTTN-208ENST00000498223 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
CTTN-208ENST00000498223 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
CTTN-208ENST00000498223 JPH4Q96JJ6 628 aa18.54■□□□□ 0.56
CTTN-208ENST00000498223 PRG4Q92954 1404 aaPredicted RBP18.54■□□□□ 0.56
CTTN-208ENST00000498223 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
CTTN-208ENST00000498223 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
CTTN-208ENST00000498223 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
CTTN-208ENST00000498223 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
CTTN-208ENST00000498223 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
CTTN-208ENST00000498223 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
CTTN-208ENST00000498223 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
CTTN-208ENST00000498223 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
CTTN-208ENST00000498223 SAMD9Q5K651 1589 aa18.38■□□□□ 0.53
CTTN-208ENST00000498223 CLIP1P30622 1438 aa18.34■□□□□ 0.53
CTTN-208ENST00000498223 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
CTTN-208ENST00000498223 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
CTTN-208ENST00000498223 PTPRGP23470 1445 aa18.32■□□□□ 0.52
CTTN-208ENST00000498223 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
CTTN-208ENST00000498223 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
CTTN-208ENST00000498223 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
CTTN-208ENST00000498223 ADCY10Q96PN6 1610 aa18.28■□□□□ 0.52
CTTN-208ENST00000498223 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
CTTN-208ENST00000498223 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
CTTN-208ENST00000498223 KIF13AQ9H1H9 1805 aa18.22■□□□□ 0.51
CTTN-208ENST00000498223 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
CTTN-208ENST00000498223 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
CTTN-208ENST00000498223 RAPGEF6Q8TEU7 1601 aa18.2■□□□□ 0.5
CTTN-208ENST00000498223 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
CTTN-208ENST00000498223 UACAQ9BZF9 1416 aa18.18■□□□□ 0.5
CTTN-208ENST00000498223 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
CTTN-208ENST00000498223 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
CTTN-208ENST00000498223 ABCA8O94911 1581 aa18.16■□□□□ 0.5
CTTN-208ENST00000498223 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.5
CTTN-208ENST00000498223 ARID3CA6NKF2 412 aa18.13■□□□□ 0.49
CTTN-208ENST00000498223 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
CTTN-208ENST00000498223 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
CTTN-208ENST00000498223 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
CTTN-208ENST00000498223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
CTTN-208ENST00000498223 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
CTTN-208ENST00000498223 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
CTTN-208ENST00000498223 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
CTTN-208ENST00000498223 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
CTTN-208ENST00000498223 CASKIN1Q8WXD9 1431 aa18.07■□□□□ 0.48
CTTN-208ENST00000498223 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
CTTN-208ENST00000498223 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
CTTN-208ENST00000498223 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
CTTN-208ENST00000498223 KDM5BQ9UGL1 1544 aa18.05■□□□□ 0.48
CTTN-208ENST00000498223 GLI2P10070 1586 aa18.02■□□□□ 0.48
CTTN-208ENST00000498223 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.47
CTTN-208ENST00000498223 EPRSP07814 1512 aaKnown RBP18.01■□□□□ 0.47
CTTN-208ENST00000498223 ATP10BO94823 1461 aa18.01■□□□□ 0.47
CTTN-208ENST00000498223 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
CTTN-208ENST00000498223 APLP2Q06481 763 aa18■□□□□ 0.47
CTTN-208ENST00000498223 KDM6BO15054 1643 aa18■□□□□ 0.47
CTTN-208ENST00000498223 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.47
CTTN-208ENST00000498223 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
CTTN-208ENST00000498223 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
CTTN-208ENST00000498223 TSPOAP1O95153 1857 aa17.95■□□□□ 0.46
CTTN-208ENST00000498223 WDR7Q9Y4E6 1490 aa17.93■□□□□ 0.46
CTTN-208ENST00000498223 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
CTTN-208ENST00000498223 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
CTTN-208ENST00000498223 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
CTTN-208ENST00000498223 TEX14Q8IWB6 1497 aa17.89■□□□□ 0.45
CTTN-208ENST00000498223 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.45
CTTN-208ENST00000498223 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
CTTN-208ENST00000498223 MAP3K1Q13233 1512 aa17.85■□□□□ 0.45
CTTN-208ENST00000498223 KIF14Q15058 1648 aa17.84■□□□□ 0.45
CTTN-208ENST00000498223 TROQ12816 1431 aaPredicted RBP17.84■□□□□ 0.45
CTTN-208ENST00000498223 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
CTTN-208ENST00000498223 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
CTTN-208ENST00000498223 COL17A1Q9UMD9 1497 aaPredicted RBP17.83■□□□□ 0.45
CTTN-208ENST00000498223 SUPT6HQ7KZ85 1726 aaKnown RBP17.82■□□□□ 0.44
CTTN-208ENST00000498223 KDM4FA0A1W2PPD8 638 aa17.82■□□□□ 0.44
CTTN-208ENST00000498223 LRRC9Q6ZRR7 1453 aa17.81■□□□□ 0.44
CTTN-208ENST00000498223 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
CTTN-208ENST00000498223 KANK4Q5T7N3 995 aaPredicted RBP17.8■□□□□ 0.44
CTTN-208ENST00000498223 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
CTTN-208ENST00000498223 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
CTTN-208ENST00000498223 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
CTTN-208ENST00000498223 TTC37Q6PGP7 1564 aa17.76■□□□□ 0.43
CTTN-208ENST00000498223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.434e-6■■■□□ 15.9
CTTN-208ENST00000498223 CDC42BPAQ5VT25 1732 aa17.74■□□□□ 0.43
CTTN-208ENST00000498223 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
CTTN-208ENST00000498223 NCOA2Q15596 1464 aa17.71■□□□□ 0.43
CTTN-208ENST00000498223 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
CTTN-208ENST00000498223 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms