RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 JPH4Q96JJ6 628 aa24.84■■□□□ 1.57
HPS1-214ENST00000498219 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
HPS1-214ENST00000498219 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
HPS1-214ENST00000498219 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
HPS1-214ENST00000498219 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
HPS1-214ENST00000498219 FAM9AQ8IZU1 332 aaPredicted RBP24.7■■□□□ 1.54
HPS1-214ENST00000498219 IQGAP2Q13576 1575 aa24.7■■□□□ 1.54
HPS1-214ENST00000498219 PRXQ9BXM0 1461 aa24.7■■□□□ 1.54
HPS1-214ENST00000498219 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
HPS1-214ENST00000498219 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.53
HPS1-214ENST00000498219 EEA1Q15075 1411 aa24.61■■□□□ 1.53
HPS1-214ENST00000498219 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
HPS1-214ENST00000498219 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
HPS1-214ENST00000498219 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
HPS1-214ENST00000498219 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
HPS1-214ENST00000498219 UGGT2Q9NYU1 1516 aa24.54■■□□□ 1.52
HPS1-214ENST00000498219 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
HPS1-214ENST00000498219 PTPRGP23470 1445 aa24.49■■□□□ 1.51
HPS1-214ENST00000498219 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
HPS1-214ENST00000498219 ADCY10Q96PN6 1610 aa24.49■■□□□ 1.51
HPS1-214ENST00000498219 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
HPS1-214ENST00000498219 KIF21BO75037 1637 aa24.43■■□□□ 1.5
HPS1-214ENST00000498219 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
HPS1-214ENST00000498219 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
HPS1-214ENST00000498219 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
HPS1-214ENST00000498219 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
HPS1-214ENST00000498219 UACAQ9BZF9 1416 aa24.32■■□□□ 1.48
HPS1-214ENST00000498219 KIF13AQ9H1H9 1805 aa24.29■■□□□ 1.48
HPS1-214ENST00000498219 ABCC2Q92887 1545 aa24.29■■□□□ 1.48
HPS1-214ENST00000498219 SAMD9Q5K651 1589 aa24.29■■□□□ 1.48
HPS1-214ENST00000498219 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
HPS1-214ENST00000498219 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
HPS1-214ENST00000498219 MAPKBP1O60336 1514 aa24.26■■□□□ 1.47
HPS1-214ENST00000498219 PLB1Q6P1J6 1458 aa24.26■■□□□ 1.47
HPS1-214ENST00000498219 ZCCHC11Q5TAX3 1644 aaKnown RBP24.21■■□□□ 1.47
HPS1-214ENST00000498219 ABCA8O94911 1581 aa24.2■■□□□ 1.47
HPS1-214ENST00000498219 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
HPS1-214ENST00000498219 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
HPS1-214ENST00000498219 ABCC10Q5T3U5 1492 aa24.18■■□□□ 1.46
HPS1-214ENST00000498219 FHOD3Q2V2M9 1422 aa24.18■■□□□ 1.46
HPS1-214ENST00000498219 KDM5BQ9UGL1 1544 aa24.17■■□□□ 1.46
HPS1-214ENST00000498219 ASXL2Q76L83 1435 aa24.16■■□□□ 1.46
HPS1-214ENST00000498219 ARID3CA6NKF2 412 aa24.13■■□□□ 1.45
HPS1-214ENST00000498219 EFCAB5A4FU69 1503 aa24.11■■□□□ 1.45
HPS1-214ENST00000498219 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
HPS1-214ENST00000498219 RAPGEF6Q8TEU7 1601 aa24.08■■□□□ 1.45
HPS1-214ENST00000498219 ARHGAP35Q9NRY4 1499 aa24.04■■□□□ 1.44
HPS1-214ENST00000498219 ATP10BO94823 1461 aa24.01■■□□□ 1.43
HPS1-214ENST00000498219 EPRSP07814 1512 aaKnown RBP24.01■■□□□ 1.43
HPS1-214ENST00000498219 WDR7Q9Y4E6 1490 aa24■■□□□ 1.43
HPS1-214ENST00000498219 GLI2P10070 1586 aa23.99■■□□□ 1.43
HPS1-214ENST00000498219 NUP153P49790 1475 aaKnown RBP23.98■■□□□ 1.43
HPS1-214ENST00000498219 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
HPS1-214ENST00000498219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
HPS1-214ENST00000498219 HNRNPUL2Q1KMD3 747 aaKnown RBP23.94■■□□□ 1.42
HPS1-214ENST00000498219 PPRC1Q5VV67 1664 aaKnown RBP23.94■■□□□ 1.42
HPS1-214ENST00000498219 MAP3K4Q9Y6R4 1608 aa23.92■■□□□ 1.42
HPS1-214ENST00000498219 FMN1Q68DA7 1419 aa23.88■■□□□ 1.41
HPS1-214ENST00000498219 ATP1B4Q9UN42 357 aaPredicted RBP23.88■■□□□ 1.41
HPS1-214ENST00000498219 CDK13Q14004 1512 aaKnown RBP23.86■■□□□ 1.41
HPS1-214ENST00000498219 CLIP1P30622 1438 aa23.85■■□□□ 1.41
HPS1-214ENST00000498219 LOC105371045A0A1W2PR82 267 aa23.84■■□□□ 1.41
HPS1-214ENST00000498219 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.41
HPS1-214ENST00000498219 HECW1Q76N89 1606 aa23.83■■□□□ 1.41
HPS1-214ENST00000498219 KDM6BO15054 1643 aa23.82■■□□□ 1.4
HPS1-214ENST00000498219 LRRIQ1Q96JM4 1722 aa23.81■■□□□ 1.4
HPS1-214ENST00000498219 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
HPS1-214ENST00000498219 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
HPS1-214ENST00000498219 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
HPS1-214ENST00000498219 ABCA9Q8IUA7 1624 aa23.75■■□□□ 1.39
HPS1-214ENST00000498219 TEX14Q8IWB6 1497 aa23.75■■□□□ 1.39
HPS1-214ENST00000498219 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
HPS1-214ENST00000498219 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
HPS1-214ENST00000498219 COL17A1Q9UMD9 1497 aaPredicted RBP23.71■■□□□ 1.39
HPS1-214ENST00000498219 CASKIN1Q8WXD9 1431 aa23.71■■□□□ 1.39
HPS1-214ENST00000498219 TTC37Q6PGP7 1564 aa23.66■■□□□ 1.38
HPS1-214ENST00000498219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.66■■□□□ 1.38
HPS1-214ENST00000498219 FYCO1Q9BQS8 1478 aa23.65■■□□□ 1.38
HPS1-214ENST00000498219 KIF14Q15058 1648 aa23.62■■□□□ 1.37
HPS1-214ENST00000498219 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
HPS1-214ENST00000498219 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
HPS1-214ENST00000498219 TROQ12816 1431 aaPredicted RBP23.59■■□□□ 1.37
HPS1-214ENST00000498219 NEO1Q92859 1461 aa23.53■■□□□ 1.36
HPS1-214ENST00000498219 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
HPS1-214ENST00000498219 ARAP3Q8WWN8 1544 aa23.52■■□□□ 1.36
HPS1-214ENST00000498219 FANCAO15360 1455 aa23.49■■□□□ 1.35
HPS1-214ENST00000498219 RAPGEF3O95398 923 aa23.48■■□□□ 1.35
HPS1-214ENST00000498219 AKNAQ7Z591 1439 aa23.48■■□□□ 1.35
HPS1-214ENST00000498219 PHLDB1Q86UU1 1377 aa23.47■■□□□ 1.35
HPS1-214ENST00000498219 PLCH2O75038 1416 aa23.47■■□□□ 1.35
HPS1-214ENST00000498219 CFAP74Q9C0B2 1584 aa23.47■■□□□ 1.35
HPS1-214ENST00000498219 FRMPD1Q5SYB0 1578 aa23.44■■□□□ 1.34
HPS1-214ENST00000498219 VPS8Q8N3P4 1428 aa23.43■■□□□ 1.34
HPS1-214ENST00000498219 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
HPS1-214ENST00000498219 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
HPS1-214ENST00000498219 CDC42BPAQ5VT25 1732 aa23.4■■□□□ 1.34
HPS1-214ENST00000498219 RICTORQ6R327 1708 aa23.4■■□□□ 1.34
HPS1-214ENST00000498219 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
HPS1-214ENST00000498219 DENND4BO75064 1496 aaPredicted RBP23.39■■□□□ 1.34
HPS1-214ENST00000498219 PREX2Q70Z35 1606 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 454.1 ms