RNA–Protein interactions for RNA: ENST00000498171.5

DGCR8-210, Transcript of DGCR8, microprocessor complex subunit, humanhuman

TSL 1 (best)

Gene DGCR8, Length 3,661 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DGCR8-210ENST00000498171 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
DGCR8-210ENST00000498171 VPS8Q8N3P4 1428 aa16.33■□□□□ 0.2
DGCR8-210ENST00000498171 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
DGCR8-210ENST00000498171 IRX6P78412 446 aaPredicted RBP16.29■□□□□ 0.2
DGCR8-210ENST00000498171 CUX1P39880 1505 aa16.28■□□□□ 0.2
DGCR8-210ENST00000498171 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
DGCR8-210ENST00000498171 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
DGCR8-210ENST00000498171 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
DGCR8-210ENST00000498171 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
DGCR8-210ENST00000498171 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
DGCR8-210ENST00000498171 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
DGCR8-210ENST00000498171 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.18
DGCR8-210ENST00000498171 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
DGCR8-210ENST00000498171 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
DGCR8-210ENST00000498171 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
DGCR8-210ENST00000498171 TIMELESSQ9UNS1 1208 aa16.15■□□□□ 0.18
DGCR8-210ENST00000498171 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
DGCR8-210ENST00000498171 CFTRP13569 1480 aa16.12■□□□□ 0.17
DGCR8-210ENST00000498171 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
DGCR8-210ENST00000498171 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
DGCR8-210ENST00000498171 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
DGCR8-210ENST00000498171 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
DGCR8-210ENST00000498171 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
DGCR8-210ENST00000498171 BRPF3Q9ULD4 1205 aa16.04■□□□□ 0.16
DGCR8-210ENST00000498171 IGF1RP08069 1367 aa16■□□□□ 0.15
DGCR8-210ENST00000498171 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
DGCR8-210ENST00000498171 CUX2O14529 1486 aa15.99■□□□□ 0.15
DGCR8-210ENST00000498171 ZMYND15Q9H091 742 aa15.98■□□□□ 0.15
DGCR8-210ENST00000498171 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
DGCR8-210ENST00000498171 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
DGCR8-210ENST00000498171 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.14
DGCR8-210ENST00000498171 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
DGCR8-210ENST00000498171 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
DGCR8-210ENST00000498171 IPO9Q96P70 1041 aaKnown RBP15.92■□□□□ 0.14
DGCR8-210ENST00000498171 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
DGCR8-210ENST00000498171 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
DGCR8-210ENST00000498171 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
DGCR8-210ENST00000498171 NEFMP07197 916 aa15.91■□□□□ 0.14
DGCR8-210ENST00000498171 ANP32AP39687 249 aaKnown RBP15.91■□□□□ 0.14
DGCR8-210ENST00000498171 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
DGCR8-210ENST00000498171 WASHC2AQ641Q2 1341 aa15.9■□□□□ 0.14
DGCR8-210ENST00000498171 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
DGCR8-210ENST00000498171 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
DGCR8-210ENST00000498171 HIRIP3Q9BW71 556 aaPredicted RBP15.89■□□□□ 0.13
DGCR8-210ENST00000498171 C11orf95C9JLR9 678 aaPredicted RBP15.88■□□□□ 0.13
DGCR8-210ENST00000498171 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
DGCR8-210ENST00000498171 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
DGCR8-210ENST00000498171 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
DGCR8-210ENST00000498171 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
DGCR8-210ENST00000498171 NESP48681 1621 aa15.86■□□□□ 0.13
DGCR8-210ENST00000498171 PHLDB1Q86UU1 1377 aa15.86■□□□□ 0.13
DGCR8-210ENST00000498171 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
DGCR8-210ENST00000498171 TIAM1Q13009 1591 aa15.84■□□□□ 0.13
DGCR8-210ENST00000498171 GLIPR1L2Q4G1C9 344 aa15.84■□□□□ 0.13
DGCR8-210ENST00000498171 WASHC2CQ9Y4E1 1318 aa15.83■□□□□ 0.13
DGCR8-210ENST00000498171 ANP32CO43423 234 aa15.83■□□□□ 0.13
DGCR8-210ENST00000498171 RAB3GAP2Q9H2M9 1393 aa15.83■□□□□ 0.12
DGCR8-210ENST00000498171 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
DGCR8-210ENST00000498171 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
DGCR8-210ENST00000498171 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
DGCR8-210ENST00000498171 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
DGCR8-210ENST00000498171 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
DGCR8-210ENST00000498171 FANCD2Q9BXW9 1451 aa15.8■□□□□ 0.12
DGCR8-210ENST00000498171 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
DGCR8-210ENST00000498171 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
DGCR8-210ENST00000498171 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
DGCR8-210ENST00000498171 FHOD3Q2V2M9 1422 aa15.78■□□□□ 0.12
DGCR8-210ENST00000498171 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
DGCR8-210ENST00000498171 POLA1P09884 1462 aaPredicted RBP15.75■□□□□ 0.11
DGCR8-210ENST00000498171 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
DGCR8-210ENST00000498171 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
DGCR8-210ENST00000498171 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
DGCR8-210ENST00000498171 GSE1Q14687 1217 aa15.71■□□□□ 0.11
DGCR8-210ENST00000498171 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
DGCR8-210ENST00000498171 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
DGCR8-210ENST00000498171 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
DGCR8-210ENST00000498171 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
DGCR8-210ENST00000498171 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
DGCR8-210ENST00000498171 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
DGCR8-210ENST00000498171 FRAT1Q92837 279 aaPredicted RBP15.67■□□□□ 0.1
DGCR8-210ENST00000498171 SETD5Q9C0A6 1442 aa15.67■□□□□ 0.1
DGCR8-210ENST00000498171 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
DGCR8-210ENST00000498171 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
DGCR8-210ENST00000498171 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
DGCR8-210ENST00000498171 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
DGCR8-210ENST00000498171 FAM43AQ8N2R8 423 aa15.62■□□□□ 0.09
DGCR8-210ENST00000498171 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
DGCR8-210ENST00000498171 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
DGCR8-210ENST00000498171 RBM10P98175 930 aaKnown RBP15.6■□□□□ 0.09
DGCR8-210ENST00000498171 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
DGCR8-210ENST00000498171 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
DGCR8-210ENST00000498171 CTTNBP2Q8WZ74 1663 aa15.59■□□□□ 0.09
DGCR8-210ENST00000498171 HSP90AA2PQ14568 343 aaPredicted RBP15.59■□□□□ 0.09
DGCR8-210ENST00000498171 CASKIN1Q8WXD9 1431 aa15.58■□□□□ 0.08
DGCR8-210ENST00000498171 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
DGCR8-210ENST00000498171 NFKBIBQ15653 356 aa15.54■□□□□ 0.08
DGCR8-210ENST00000498171 RRAGDQ9NQL2 400 aaPredicted RBP15.54■□□□□ 0.08
DGCR8-210ENST00000498171 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.082e-7■■■■■ 29.5
DGCR8-210ENST00000498171 CUL7Q14999 1698 aa15.53■□□□□ 0.08
DGCR8-210ENST00000498171 NAP1L5Q96NT1 182 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms