RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CUL7Q14999 1698 aa39.45■■■■□ 3.91
CDKN2A-208ENST00000498124 JPH4Q96JJ6 628 aa39.43■■■■□ 3.9
CDKN2A-208ENST00000498124 KIAA0586Q9BVV6 1533 aa39.31■■■■□ 3.88
CDKN2A-208ENST00000498124 CARMIL1Q5VZK9 1371 aa39.2■■■■□ 3.87
CDKN2A-208ENST00000498124 KIF13AQ9H1H9 1805 aa39.12■■■■□ 3.85
CDKN2A-208ENST00000498124 ADCY10Q96PN6 1610 aa39.11■■■■□ 3.85
CDKN2A-208ENST00000498124 MAPKBP1O60336 1514 aa39.01■■■■□ 3.84
CDKN2A-208ENST00000498124 IQGAP2Q13576 1575 aa38.98■■■■□ 3.83
CDKN2A-208ENST00000498124 ABCC10Q5T3U5 1492 aa38.92■■■■□ 3.82
CDKN2A-208ENST00000498124 DIP2BQ9P265 1576 aa38.88■■■■□ 3.81
CDKN2A-208ENST00000498124 RAPGEF2Q9Y4G8 1499 aa38.88■■■■□ 3.81
CDKN2A-208ENST00000498124 PTPRGP23470 1445 aa38.87■■■■□ 3.81
CDKN2A-208ENST00000498124 NPM1P06748 294 aaKnown RBP eCLIP38.85■■■■□ 3.81
CDKN2A-208ENST00000498124 CARMIL2Q6F5E8 1435 aa38.84■■■■□ 3.81
CDKN2A-208ENST00000498124 TNIKQ9UKE5 1360 aa38.82■■■■□ 3.81
CDKN2A-208ENST00000498124 DISP1Q96F81 1524 aa38.82■■■■□ 3.8
CDKN2A-208ENST00000498124 FAM69CQ0P6D2 419 aa38.78■■■■□ 3.8
CDKN2A-208ENST00000498124 UGGT2Q9NYU1 1516 aa38.76■■■■□ 3.8
CDKN2A-208ENST00000498124 ABCC2Q92887 1545 aa38.71■■■■□ 3.79
CDKN2A-208ENST00000498124 TTBK1Q5TCY1 1321 aaPredicted RBP38.7■■■■□ 3.79
CDKN2A-208ENST00000498124 UHRF1BP1LA0JNW5 1464 aa38.67■■■■□ 3.78
CDKN2A-208ENST00000498124 KIAA0556O60303 1618 aa38.66■■■■□ 3.78
CDKN2A-208ENST00000498124 CTTNBP2Q8WZ74 1663 aa38.62■■■■□ 3.77
CDKN2A-208ENST00000498124 UACAQ9BZF9 1416 aa38.61■■■■□ 3.77
CDKN2A-208ENST00000498124 PRXQ9BXM0 1461 aa38.59■■■■□ 3.77
CDKN2A-208ENST00000498124 ASXL2Q76L83 1435 aa38.54■■■■□ 3.76
CDKN2A-208ENST00000498124 TSPOAP1O95153 1857 aa38.52■■■■□ 3.76
CDKN2A-208ENST00000498124 KDM5BQ9UGL1 1544 aa38.5■■■■□ 3.75
CDKN2A-208ENST00000498124 PLB1Q6P1J6 1458 aa38.49■■■■□ 3.75
CDKN2A-208ENST00000498124 GLI2P10070 1586 aa38.46■■■■□ 3.75
CDKN2A-208ENST00000498124 KDM6BO15054 1643 aa38.45■■■■□ 3.75
CDKN2A-208ENST00000498124 ZCCHC11Q5TAX3 1644 aaKnown RBP38.43■■■■□ 3.74
CDKN2A-208ENST00000498124 AEBP2Q6ZN18 517 aaPredicted RBP38.43■■■■□ 3.74
CDKN2A-208ENST00000498124 PPRC1Q5VV67 1664 aaKnown RBP38.41■■■■□ 3.74
CDKN2A-208ENST00000498124 GOLGA3Q08378 1498 aa38.37■■■■□ 3.73
CDKN2A-208ENST00000498124 EPRSP07814 1512 aaKnown RBP38.33■■■■□ 3.73
CDKN2A-208ENST00000498124 ABCA8O94911 1581 aa38.3■■■■□ 3.72
CDKN2A-208ENST00000498124 MAP3K4Q9Y6R4 1608 aa38.27■■■■□ 3.72
CDKN2A-208ENST00000498124 WDR7Q9Y4E6 1490 aa38.2■■■■□ 3.71
CDKN2A-208ENST00000498124 CSRNP3Q8WYN3 585 aa38.19■■■■□ 3.7
CDKN2A-208ENST00000498124 SAMD9Q5K651 1589 aa38.11■■■■□ 3.69
CDKN2A-208ENST00000498124 EEA1Q15075 1411 aa38.11■■■■□ 3.69
CDKN2A-208ENST00000498124 COL17A1Q9UMD9 1497 aaPredicted RBP38.09■■■■□ 3.69
CDKN2A-208ENST00000498124 TEX14Q8IWB6 1497 aa38.06■■■■□ 3.68
CDKN2A-208ENST00000498124 P3H3Q8IVL6 736 aa38■■■■□ 3.67
CDKN2A-208ENST00000498124 KDM4FA0A1W2PPD8 638 aa37.98■■■■□ 3.67
CDKN2A-208ENST00000498124 CFAP43Q8NDM7 1665 aa37.98■■■■□ 3.67
CDKN2A-208ENST00000498124 ATP10BO94823 1461 aa37.93■■■■□ 3.66
CDKN2A-208ENST00000498124 MAGI3Q5TCQ9 1506 aa37.92■■■■□ 3.66
CDKN2A-208ENST00000498124 CD109Q6YHK3 1445 aa37.9■■■■□ 3.66
CDKN2A-208ENST00000498124 KIF21BO75037 1637 aa37.88■■■■□ 3.65
CDKN2A-208ENST00000498124 RAPGEF6Q8TEU7 1601 aa37.88■■■■□ 3.65
CDKN2A-208ENST00000498124 KCNH8Q96L42 1107 aa37.88■■■■□ 3.65
CDKN2A-208ENST00000498124 ARID3CA6NKF2 412 aa37.85■■■■□ 3.65
CDKN2A-208ENST00000498124 FAM9AQ8IZU1 332 aaPredicted RBP37.85■■■■□ 3.65
CDKN2A-208ENST00000498124 FHOD3Q2V2M9 1422 aa37.79■■■■□ 3.64
CDKN2A-208ENST00000498124 NUP153P49790 1475 aaKnown RBP37.77■■■■□ 3.64
CDKN2A-208ENST00000498124 ADGRL1O94910 1474 aa37.75■■■■□ 3.63
CDKN2A-208ENST00000498124 ABCA9Q8IUA7 1624 aa37.74■■■■□ 3.63
CDKN2A-208ENST00000498124 RANGAP1P46060 587 aaPredicted RBP37.72■■■■□ 3.63
CDKN2A-208ENST00000498124 EFCAB5A4FU69 1503 aa37.71■■■■□ 3.63
CDKN2A-208ENST00000498124 CHIC1Q5VXU3 224 aa37.65■■■■□ 3.62
CDKN2A-208ENST00000498124 ARAP3Q8WWN8 1544 aa37.63■■■■□ 3.61
CDKN2A-208ENST00000498124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.53■■■■□ 3.6
CDKN2A-208ENST00000498124 HNRNPUL2Q1KMD3 747 aaKnown RBP37.53■■■■□ 3.6
CDKN2A-208ENST00000498124 NEO1Q92859 1461 aa37.48■■■■□ 3.59
CDKN2A-208ENST00000498124 PHLDB1Q86UU1 1377 aa37.48■■■■□ 3.59
CDKN2A-208ENST00000498124 EHMT2Q96KQ7 1210 aa37.44■■■■□ 3.58
CDKN2A-208ENST00000498124 FRMPD1Q5SYB0 1578 aa37.42■■■■□ 3.58
CDKN2A-208ENST00000498124 ARHGAP35Q9NRY4 1499 aa37.41■■■■□ 3.58
CDKN2A-208ENST00000498124 CDK13Q14004 1512 aaKnown RBP37.41■■■■□ 3.58
CDKN2A-208ENST00000498124 UBTFP17480 764 aaKnown RBP37.39■■■■□ 3.58
CDKN2A-208ENST00000498124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.39■■■■□ 3.58
CDKN2A-208ENST00000498124 PLEKHD1A6NEE1 506 aa37.37■■■■□ 3.57
CDKN2A-208ENST00000498124 TTC37Q6PGP7 1564 aa37.37■■■■□ 3.57
CDKN2A-208ENST00000498124 RAPGEF3O95398 923 aa37.34■■■■□ 3.57
CDKN2A-208ENST00000498124 FMN1Q68DA7 1419 aa37.31■■■■□ 3.56
CDKN2A-208ENST00000498124 HECW1Q76N89 1606 aa37.29■■■■□ 3.56
CDKN2A-208ENST00000498124 FANCAO15360 1455 aa37.25■■■■□ 3.55
CDKN2A-208ENST00000498124 CFAP74Q9C0B2 1584 aa37.25■■■■□ 3.55
CDKN2A-208ENST00000498124 RICTORQ6R327 1708 aa37.24■■■■□ 3.55
CDKN2A-208ENST00000498124 AKNAQ7Z591 1439 aa37.23■■■■□ 3.55
CDKN2A-208ENST00000498124 HECW2Q9P2P5 1572 aa37.2■■■■□ 3.55
CDKN2A-208ENST00000498124 DENND4BO75064 1496 aaPredicted RBP37.19■■■■□ 3.54
CDKN2A-208ENST00000498124 ARHGEF40Q8TER5 1519 aa37.18■■■■□ 3.54
CDKN2A-208ENST00000498124 ADAMTSL3P82987 1691 aa37.17■■■■□ 3.54
CDKN2A-208ENST00000498124 LRRIQ1Q96JM4 1722 aa37.16■■■■□ 3.54
CDKN2A-208ENST00000498124 ZMYM4Q5VZL5 1548 aa37.11■■■■□ 3.53
CDKN2A-208ENST00000498124 PLCH2O75038 1416 aa37.1■■■■□ 3.53
CDKN2A-208ENST00000498124 KIF14Q15058 1648 aa37.1■■■■□ 3.53
CDKN2A-208ENST00000498124 ATP1B4Q9UN42 357 aaPredicted RBP37.09■■■■□ 3.53
CDKN2A-208ENST00000498124 BCORL1Q5H9F3 1711 aa37.09■■■■□ 3.53
CDKN2A-208ENST00000498124 MYO5CQ9NQX4 1742 aa37.05■■■■□ 3.52
CDKN2A-208ENST00000498124 TROQ12816 1431 aaPredicted RBP37.03■■■■□ 3.52
CDKN2A-208ENST00000498124 PCF11O94913 1555 aaKnown RBP37.03■■■■□ 3.52
CDKN2A-208ENST00000498124 PTPRMP28827 1452 aa37.02■■■■□ 3.52
CDKN2A-208ENST00000498124 MADDQ8WXG6 1647 aa37■■■■□ 3.51
CDKN2A-208ENST00000498124 POGZQ7Z3K3 1410 aa37■■■■□ 3.51
CDKN2A-208ENST00000498124 ZFYVE16Q7Z3T8 1539 aa36.99■■■■□ 3.51
CDKN2A-208ENST00000498124 SIGLEC1Q9BZZ2 1709 aa36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms