RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 KIF21BO75037 1637 aa32.28■■■□□ 2.76
HLA-DPB1-217ENST00000498038 JPH4Q96JJ6 628 aa32.24■■■□□ 2.75
HLA-DPB1-217ENST00000498038 IQGAP2Q13576 1575 aa32.16■■■□□ 2.74
HLA-DPB1-217ENST00000498038 SHROOM2Q13796 1616 aa32.16■■■□□ 2.74
HLA-DPB1-217ENST00000498038 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
HLA-DPB1-217ENST00000498038 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
HLA-DPB1-217ENST00000498038 UBTFP17480 764 aaKnown RBP32.15■■■□□ 2.74
HLA-DPB1-217ENST00000498038 CTTNBP2Q8WZ74 1663 aa32.15■■■□□ 2.74
HLA-DPB1-217ENST00000498038 RIMBP3CA6NJZ7 1639 aa32.12■■■□□ 2.73
HLA-DPB1-217ENST00000498038 RIMBP3BA6NNM3 1639 aa32.12■■■□□ 2.73
HLA-DPB1-217ENST00000498038 RIMBP3Q9UFD9 1639 aa32.12■■■□□ 2.73
HLA-DPB1-217ENST00000498038 PRG4Q92954 1404 aaPredicted RBP32.11■■■□□ 2.73
HLA-DPB1-217ENST00000498038 ERCC6L2Q5T890 1561 aa32.05■■■□□ 2.72
HLA-DPB1-217ENST00000498038 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
HLA-DPB1-217ENST00000498038 RANGAP1P46060 587 aaPredicted RBP31.98■■■□□ 2.71
HLA-DPB1-217ENST00000498038 CARMIL2Q6F5E8 1435 aa31.97■■■□□ 2.71
HLA-DPB1-217ENST00000498038 CYB5RLQ6IPT4 315 aa31.94■■■□□ 2.7
HLA-DPB1-217ENST00000498038 ARAP1Q96P48 1450 aa31.93■■■□□ 2.7
HLA-DPB1-217ENST00000498038 DISP1Q96F81 1524 aa31.91■■■□□ 2.7
HLA-DPB1-217ENST00000498038 LOC105371045A0A1W2PR82 267 aa31.91■■■□□ 2.7
HLA-DPB1-217ENST00000498038 TTBK1Q5TCY1 1321 aaPredicted RBP31.86■■■□□ 2.69
HLA-DPB1-217ENST00000498038 P3H3Q8IVL6 736 aa31.84■■■□□ 2.69
HLA-DPB1-217ENST00000498038 KIAA0556O60303 1618 aa31.84■■■□□ 2.69
HLA-DPB1-217ENST00000498038 TNIKQ9UKE5 1360 aa31.83■■■□□ 2.69
HLA-DPB1-217ENST00000498038 PTPRGP23470 1445 aa31.79■■■□□ 2.68
HLA-DPB1-217ENST00000498038 SAMD9Q5K651 1589 aa31.76■■■□□ 2.67
HLA-DPB1-217ENST00000498038 EFCAB5A4FU69 1503 aa31.7■■■□□ 2.67
HLA-DPB1-217ENST00000498038 FHOD3Q2V2M9 1422 aa31.66■■■□□ 2.66
HLA-DPB1-217ENST00000498038 ARHGAP35Q9NRY4 1499 aa31.65■■■□□ 2.66
HLA-DPB1-217ENST00000498038 CLIP1P30622 1438 aa31.61■■■□□ 2.65
HLA-DPB1-217ENST00000498038 CEP162Q5TB80 1403 aa31.57■■■□□ 2.64
HLA-DPB1-217ENST00000498038 UACAQ9BZF9 1416 aa31.57■■■□□ 2.64
HLA-DPB1-217ENST00000498038 PLB1Q6P1J6 1458 aa31.53■■■□□ 2.64
HLA-DPB1-217ENST00000498038 ADCY10Q96PN6 1610 aa31.52■■■□□ 2.64
HLA-DPB1-217ENST00000498038 NPM1P06748 294 aaKnown RBP eCLIP31.5■■■□□ 2.63
HLA-DPB1-217ENST00000498038 UHRF1BP1LA0JNW5 1464 aa31.48■■■□□ 2.63
HLA-DPB1-217ENST00000498038 ABCC2Q92887 1545 aa31.47■■■□□ 2.63
HLA-DPB1-217ENST00000498038 ABCA8O94911 1581 aa31.47■■■□□ 2.63
HLA-DPB1-217ENST00000498038 FMN1Q68DA7 1419 aa31.44■■■□□ 2.62
HLA-DPB1-217ENST00000498038 RAPGEF6Q8TEU7 1601 aa31.4■■■□□ 2.62
HLA-DPB1-217ENST00000498038 ATP1B4Q9UN42 357 aaPredicted RBP31.37■■■□□ 2.61
HLA-DPB1-217ENST00000498038 ARID3CA6NKF2 412 aa31.36■■■□□ 2.61
HLA-DPB1-217ENST00000498038 KDM5BQ9UGL1 1544 aa31.33■■■□□ 2.61
HLA-DPB1-217ENST00000498038 NUP153P49790 1475 aaKnown RBP31.29■■■□□ 2.6
HLA-DPB1-217ENST00000498038 ZCCHC11Q5TAX3 1644 aaKnown RBP31.28■■■□□ 2.6
HLA-DPB1-217ENST00000498038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.27■■■□□ 2.6
HLA-DPB1-217ENST00000498038 HNRNPUL2Q1KMD3 747 aaKnown RBP31.27■■■□□ 2.6
HLA-DPB1-217ENST00000498038 ATP10BO94823 1461 aa31.26■■■□□ 2.59
HLA-DPB1-217ENST00000498038 CASKIN1Q8WXD9 1431 aa31.24■■■□□ 2.59
HLA-DPB1-217ENST00000498038 HECW1Q76N89 1606 aa31.23■■■□□ 2.59
HLA-DPB1-217ENST00000498038 MAPKBP1O60336 1514 aa31.22■■■□□ 2.59
HLA-DPB1-217ENST00000498038 PCF11O94913 1555 aaKnown RBP31.22■■■□□ 2.59
HLA-DPB1-217ENST00000498038 ASXL2Q76L83 1435 aa31.19■■■□□ 2.58
HLA-DPB1-217ENST00000498038 TRHP20396 242 aaPredicted RBP31.19■■■□□ 2.58
HLA-DPB1-217ENST00000498038 FYCO1Q9BQS8 1478 aa31.17■■■□□ 2.58
HLA-DPB1-217ENST00000498038 EPRSP07814 1512 aaKnown RBP31.15■■■□□ 2.58
HLA-DPB1-217ENST00000498038 VPS8Q8N3P4 1428 aa31.15■■■□□ 2.58
HLA-DPB1-217ENST00000498038 CDK13Q14004 1512 aaKnown RBP31.14■■■□□ 2.57
HLA-DPB1-217ENST00000498038 PLEKHD1A6NEE1 506 aa31.09■■■□□ 2.57
HLA-DPB1-217ENST00000498038 WDR7Q9Y4E6 1490 aa31.08■■■□□ 2.57
HLA-DPB1-217ENST00000498038 LRRIQ1Q96JM4 1722 aa31.07■■■□□ 2.56
HLA-DPB1-217ENST00000498038 KCNH8Q96L42 1107 aa31.07■■■□□ 2.56
HLA-DPB1-217ENST00000498038 FAM69CQ0P6D2 419 aa31.06■■■□□ 2.56
HLA-DPB1-217ENST00000498038 ABCC10Q5T3U5 1492 aa31.06■■■□□ 2.56
HLA-DPB1-217ENST00000498038 CCDC18Q5T9S5 1454 aa31.06■■■□□ 2.56
HLA-DPB1-217ENST00000498038 CDK11AQ9UQ88 783 aaPredicted RBP31.05■■■□□ 2.56
HLA-DPB1-217ENST00000498038 DIP2BQ9P265 1576 aa31■■■□□ 2.55
HLA-DPB1-217ENST00000498038 KIF13AQ9H1H9 1805 aa30.95■■■□□ 2.55
HLA-DPB1-217ENST00000498038 GLI2P10070 1586 aa30.91■■■□□ 2.54
HLA-DPB1-217ENST00000498038 APLP2Q06481 763 aa30.89■■■□□ 2.54
HLA-DPB1-217ENST00000498038 TROQ12816 1431 aaPredicted RBP30.89■■■□□ 2.53
HLA-DPB1-217ENST00000498038 MAGI3Q5TCQ9 1506 aa30.85■■■□□ 2.53
HLA-DPB1-217ENST00000498038 TIAM1Q13009 1591 aa30.83■■■□□ 2.53
HLA-DPB1-217ENST00000498038 MTUS2Q5JR59 1369 aa30.83■■■□□ 2.53
HLA-DPB1-217ENST00000498038 CFAP43Q8NDM7 1665 aa30.82■■■□□ 2.52
HLA-DPB1-217ENST00000498038 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
HLA-DPB1-217ENST00000498038 CD109Q6YHK3 1445 aa30.79■■■□□ 2.52
HLA-DPB1-217ENST00000498038 ABCA9Q8IUA7 1624 aa30.78■■■□□ 2.52
HLA-DPB1-217ENST00000498038 MAP3K4Q9Y6R4 1608 aa30.78■■■□□ 2.52
HLA-DPB1-217ENST00000498038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.77■■■□□ 2.52
HLA-DPB1-217ENST00000498038 KIF14Q15058 1648 aa30.76■■■□□ 2.52
HLA-DPB1-217ENST00000498038 TSPOAP1O95153 1857 aa30.76■■■□□ 2.51
HLA-DPB1-217ENST00000498038 KANK4Q5T7N3 995 aaPredicted RBP30.74■■■□□ 2.51
HLA-DPB1-217ENST00000498038 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
HLA-DPB1-217ENST00000498038 LRRC9Q6ZRR7 1453 aa30.72■■■□□ 2.51
HLA-DPB1-217ENST00000498038 TTC37Q6PGP7 1564 aa30.71■■■□□ 2.51
HLA-DPB1-217ENST00000498038 PPRC1Q5VV67 1664 aaKnown RBP30.65■■■□□ 2.5
HLA-DPB1-217ENST00000498038 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
HLA-DPB1-217ENST00000498038 PLCH2O75038 1416 aa30.61■■■□□ 2.49
HLA-DPB1-217ENST00000498038 SUPT6HQ7KZ85 1726 aaKnown RBP30.6■■■□□ 2.49
HLA-DPB1-217ENST00000498038 MYO5CQ9NQX4 1742 aa30.59■■■□□ 2.49
HLA-DPB1-217ENST00000498038 CCNB3Q8WWL7 1395 aa30.58■■■□□ 2.49
HLA-DPB1-217ENST00000498038 NCOA2Q15596 1464 aa30.57■■■□□ 2.48
HLA-DPB1-217ENST00000498038 EFCAB2Q5VUJ9 269 aa30.54■■■□□ 2.48
HLA-DPB1-217ENST00000498038 PPARGC1BQ86YN6 1023 aaKnown RBP30.54■■■□□ 2.48
HLA-DPB1-217ENST00000498038 FANCAO15360 1455 aa30.53■■■□□ 2.48
HLA-DPB1-217ENST00000498038 GPATCH8Q9UKJ3 1502 aaKnown RBP30.52■■■□□ 2.48
HLA-DPB1-217ENST00000498038 ARHGAP5Q13017 1502 aa30.52■■■□□ 2.48
HLA-DPB1-217ENST00000498038 CDC42BPAQ5VT25 1732 aa30.5■■■□□ 2.47
HLA-DPB1-217ENST00000498038 NEO1Q92859 1461 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms