RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
NXF3-207ENST00000497850 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
NXF3-207ENST00000497850 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
NXF3-207ENST00000497850 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
NXF3-207ENST00000497850 MIER1Q8N108 512 aa18.91■□□□□ 0.62
NXF3-207ENST00000497850 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
NXF3-207ENST00000497850 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.61
NXF3-207ENST00000497850 ANP32EQ9BTT0 268 aa18.89■□□□□ 0.61
NXF3-207ENST00000497850 PCF11O94913 1555 aaKnown RBP18.88■□□□□ 0.61
NXF3-207ENST00000497850 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
NXF3-207ENST00000497850 LRRC9Q6ZRR7 1453 aa18.86■□□□□ 0.61
NXF3-207ENST00000497850 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
NXF3-207ENST00000497850 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.61
NXF3-207ENST00000497850 CLSPNQ9HAW4 1339 aa18.82■□□□□ 0.6
NXF3-207ENST00000497850 TDRD9Q8NDG6 1382 aaKnown RBP18.82■□□□□ 0.6
NXF3-207ENST00000497850 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
NXF3-207ENST00000497850 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
NXF3-207ENST00000497850 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
NXF3-207ENST00000497850 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
NXF3-207ENST00000497850 CFAP43Q8NDM7 1665 aa18.8■□□□□ 0.6
NXF3-207ENST00000497850 CTTNBP2Q8WZ74 1663 aa18.8■□□□□ 0.6
NXF3-207ENST00000497850 CUL7Q14999 1698 aa18.79■□□□□ 0.6
NXF3-207ENST00000497850 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
NXF3-207ENST00000497850 SUPT16HQ9Y5B9 1047 aaKnown RBP18.77■□□□□ 0.6
NXF3-207ENST00000497850 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
NXF3-207ENST00000497850 TSHZ2Q9NRE2 1034 aa18.75■□□□□ 0.59
NXF3-207ENST00000497850 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
NXF3-207ENST00000497850 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
NXF3-207ENST00000497850 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
NXF3-207ENST00000497850 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
NXF3-207ENST00000497850 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
NXF3-207ENST00000497850 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
NXF3-207ENST00000497850 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
NXF3-207ENST00000497850 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
NXF3-207ENST00000497850 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
NXF3-207ENST00000497850 LRRIQ1Q96JM4 1722 aa18.64■□□□□ 0.57
NXF3-207ENST00000497850 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
NXF3-207ENST00000497850 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
NXF3-207ENST00000497850 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.57
NXF3-207ENST00000497850 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
NXF3-207ENST00000497850 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
NXF3-207ENST00000497850 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
NXF3-207ENST00000497850 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
NXF3-207ENST00000497850 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
NXF3-207ENST00000497850 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
NXF3-207ENST00000497850 ARID3CA6NKF2 412 aa18.52■□□□□ 0.56
NXF3-207ENST00000497850 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
NXF3-207ENST00000497850 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
NXF3-207ENST00000497850 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
NXF3-207ENST00000497850 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
NXF3-207ENST00000497850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.55
NXF3-207ENST00000497850 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
NXF3-207ENST00000497850 CCDC18Q5T9S5 1454 aa18.45■□□□□ 0.54
NXF3-207ENST00000497850 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
NXF3-207ENST00000497850 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
NXF3-207ENST00000497850 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
NXF3-207ENST00000497850 KCNH8Q96L42 1107 aa18.42■□□□□ 0.54
NXF3-207ENST00000497850 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
NXF3-207ENST00000497850 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
NXF3-207ENST00000497850 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
NXF3-207ENST00000497850 CHIC2Q9UKJ5 165 aa18.41■□□□□ 0.54
NXF3-207ENST00000497850 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
NXF3-207ENST00000497850 THOC2Q8NI27 1593 aaKnown RBP18.4■□□□□ 0.54
NXF3-207ENST00000497850 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
NXF3-207ENST00000497850 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
NXF3-207ENST00000497850 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
NXF3-207ENST00000497850 UGGT2Q9NYU1 1516 aa18.38■□□□□ 0.53
NXF3-207ENST00000497850 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
NXF3-207ENST00000497850 NAIPQ13075 1403 aa18.37■□□□□ 0.53
NXF3-207ENST00000497850 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
NXF3-207ENST00000497850 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
NXF3-207ENST00000497850 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
NXF3-207ENST00000497850 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
NXF3-207ENST00000497850 TONSLQ96HA7 1378 aa18.33■□□□□ 0.53
NXF3-207ENST00000497850 UACAQ9BZF9 1416 aa18.33■□□□□ 0.53
NXF3-207ENST00000497850 ARHGEF11O15085 1522 aa18.33■□□□□ 0.52
NXF3-207ENST00000497850 WDR62O43379 1518 aa18.3■□□□□ 0.52
NXF3-207ENST00000497850 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
NXF3-207ENST00000497850 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
NXF3-207ENST00000497850 TRIM52Q96A61 297 aa18.28■□□□□ 0.52
NXF3-207ENST00000497850 KDM6BO15054 1643 aa18.28■□□□□ 0.52
NXF3-207ENST00000497850 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
NXF3-207ENST00000497850 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
NXF3-207ENST00000497850 TCOF1Q13428 1488 aaKnown RBP18.24■□□□□ 0.51
NXF3-207ENST00000497850 BCANQ96GW7 911 aa18.24■□□□□ 0.51
NXF3-207ENST00000497850 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
NXF3-207ENST00000497850 KIAA0556O60303 1618 aa18.23■□□□□ 0.51
NXF3-207ENST00000497850 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
NXF3-207ENST00000497850 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
NXF3-207ENST00000497850 FBLN2P98095 1184 aa18.22■□□□□ 0.51
NXF3-207ENST00000497850 FOXD1Q16676 465 aa18.21■□□□□ 0.51
NXF3-207ENST00000497850 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
NXF3-207ENST00000497850 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
NXF3-207ENST00000497850 GRIN2AQ12879 1464 aa18.2■□□□□ 0.5
NXF3-207ENST00000497850 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
NXF3-207ENST00000497850 NUP153P49790 1475 aaKnown RBP18.18■□□□□ 0.5
NXF3-207ENST00000497850 KDM5BQ9UGL1 1544 aa18.17■□□□□ 0.5
NXF3-207ENST00000497850 FKBP8Q14318 412 aa18.16■□□□□ 0.5
NXF3-207ENST00000497850 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
NXF3-207ENST00000497850 MSH5O43196 834 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms