RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 MAPKBP1O60336 1514 aa27.3■■□□□ 1.96
RNF220-218ENST00000497469 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
RNF220-218ENST00000497469 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
RNF220-218ENST00000497469 PRG4Q92954 1404 aaPredicted RBP27.22■■□□□ 1.95
RNF220-218ENST00000497469 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
RNF220-218ENST00000497469 ADCY10Q96PN6 1610 aa27.14■■□□□ 1.94
RNF220-218ENST00000497469 ILDR2Q71H61 639 aa27.09■■□□□ 1.93
RNF220-218ENST00000497469 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
RNF220-218ENST00000497469 SOCS7O14512 581 aa27.07■■□□□ 1.92
RNF220-218ENST00000497469 JPH4Q96JJ6 628 aa27.01■■□□□ 1.91
RNF220-218ENST00000497469 PPRC1Q5VV67 1664 aaKnown RBP26.97■■□□□ 1.91
RNF220-218ENST00000497469 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
RNF220-218ENST00000497469 COL17A1Q9UMD9 1497 aaPredicted RBP26.95■■□□□ 1.91
RNF220-218ENST00000497469 DISP3Q9P2K9 1392 aa26.9■■□□□ 1.9
RNF220-218ENST00000497469 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
RNF220-218ENST00000497469 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
RNF220-218ENST00000497469 GLI2P10070 1586 aa26.73■■□□□ 1.87
RNF220-218ENST00000497469 ASXL2Q76L83 1435 aa26.73■■□□□ 1.87
RNF220-218ENST00000497469 TTBK1Q5TCY1 1321 aaPredicted RBP26.7■■□□□ 1.87
RNF220-218ENST00000497469 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.86
RNF220-218ENST00000497469 WRNQ14191 1432 aaPredicted RBP eCLIP26.67■■□□□ 1.86
RNF220-218ENST00000497469 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
RNF220-218ENST00000497469 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
RNF220-218ENST00000497469 MAP3K4Q9Y6R4 1608 aa26.59■■□□□ 1.85
RNF220-218ENST00000497469 TEX14Q8IWB6 1497 aa26.58■■□□□ 1.85
RNF220-218ENST00000497469 KIF21BO75037 1637 aa26.56■■□□□ 1.84
RNF220-218ENST00000497469 CUL7Q14999 1698 aa26.56■■□□□ 1.84
RNF220-218ENST00000497469 PTPRGP23470 1445 aa26.55■■□□□ 1.84
RNF220-218ENST00000497469 EPRSP07814 1512 aaKnown RBP26.53■■□□□ 1.84
RNF220-218ENST00000497469 SPATA31D1Q6ZQQ2 1576 aa26.52■■□□□ 1.84
RNF220-218ENST00000497469 PTPRMP28827 1452 aa26.49■■□□□ 1.83
RNF220-218ENST00000497469 CERKQ8TCT0 537 aa26.49■■□□□ 1.83
RNF220-218ENST00000497469 PCF11O94913 1555 aaKnown RBP26.48■■□□□ 1.83
RNF220-218ENST00000497469 KIAA0586Q9BVV6 1533 aa26.44■■□□□ 1.82
RNF220-218ENST00000497469 BIVM-ERCC5R4GMW8 1640 aa26.38■■□□□ 1.81
RNF220-218ENST00000497469 HSPA2P54652 639 aa26.35■■□□□ 1.81
RNF220-218ENST00000497469 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
RNF220-218ENST00000497469 TNIKQ9UKE5 1360 aa26.34■■□□□ 1.81
RNF220-218ENST00000497469 UHRF1BP1LA0JNW5 1464 aa26.32■■□□□ 1.8
RNF220-218ENST00000497469 UACAQ9BZF9 1416 aa26.29■■□□□ 1.8
RNF220-218ENST00000497469 ZCCHC11Q5TAX3 1644 aaKnown RBP26.26■■□□□ 1.79
RNF220-218ENST00000497469 KDM5BQ9UGL1 1544 aa26.25■■□□□ 1.79
RNF220-218ENST00000497469 MADDQ8WXG6 1647 aa26.23■■□□□ 1.79
RNF220-218ENST00000497469 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
RNF220-218ENST00000497469 CD109Q6YHK3 1445 aa26.19■■□□□ 1.78
RNF220-218ENST00000497469 MAGI3Q5TCQ9 1506 aa26.18■■□□□ 1.78
RNF220-218ENST00000497469 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
RNF220-218ENST00000497469 PLPPR3Q6T4P5 718 aa26.17■■□□□ 1.78
RNF220-218ENST00000497469 BCORL1Q5H9F3 1711 aa26.13■■□□□ 1.77
RNF220-218ENST00000497469 RIMS1Q86UR5 1692 aaKnown RBP26.09■■□□□ 1.77
RNF220-218ENST00000497469 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
RNF220-218ENST00000497469 ARID4BQ4LE39 1312 aaPredicted RBP26.09■■□□□ 1.77
RNF220-218ENST00000497469 KCNH8Q96L42 1107 aa26.08■■□□□ 1.77
RNF220-218ENST00000497469 DISP1Q96F81 1524 aa26.04■■□□□ 1.76
RNF220-218ENST00000497469 IGF1RP08069 1367 aa26.03■■□□□ 1.76
RNF220-218ENST00000497469 IQGAP2Q13576 1575 aa26.01■■□□□ 1.75
RNF220-218ENST00000497469 ARAP3Q8WWN8 1544 aa26.01■■□□□ 1.75
RNF220-218ENST00000497469 RAPGEF3O95398 923 aa25.95■■□□□ 1.74
RNF220-218ENST00000497469 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
RNF220-218ENST00000497469 FRMPD1Q5SYB0 1578 aa25.82■■□□□ 1.72
RNF220-218ENST00000497469 KIAA0556O60303 1618 aa25.82■■□□□ 1.72
RNF220-218ENST00000497469 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
RNF220-218ENST00000497469 YEATS2Q9ULM3 1422 aa25.77■■□□□ 1.72
RNF220-218ENST00000497469 STRCQ7RTU9 1775 aa25.76■■□□□ 1.71
RNF220-218ENST00000497469 ARHGEF40Q8TER5 1519 aa25.75■■□□□ 1.71
RNF220-218ENST00000497469 UGGT2Q9NYU1 1516 aa25.75■■□□□ 1.71
RNF220-218ENST00000497469 MLECQ14165 292 aa25.7■■□□□ 1.7
RNF220-218ENST00000497469 DMRT2Q9Y5R5 561 aa25.7■■□□□ 1.7
RNF220-218ENST00000497469 ARID3CA6NKF2 412 aa25.69■■□□□ 1.7
RNF220-218ENST00000497469 SIGLEC1Q9BZZ2 1709 aa25.68■■□□□ 1.7
RNF220-218ENST00000497469 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
RNF220-218ENST00000497469 PREX1Q8TCU6 1659 aa25.67■■□□□ 1.7
RNF220-218ENST00000497469 ABCA8O94911 1581 aa25.66■■□□□ 1.7
RNF220-218ENST00000497469 LTBP4Q8N2S1 1624 aa25.65■■□□□ 1.7
RNF220-218ENST00000497469 FER1L4A9Z1Z3 1794 aa25.64■■□□□ 1.69
RNF220-218ENST00000497469 POGZQ7Z3K3 1410 aa25.63■■□□□ 1.69
RNF220-218ENST00000497469 TTC37Q6PGP7 1564 aa25.63■■□□□ 1.69
RNF220-218ENST00000497469 FANCAO15360 1455 aa25.62■■□□□ 1.69
RNF220-218ENST00000497469 NEO1Q92859 1461 aa25.62■■□□□ 1.69
RNF220-218ENST00000497469 ABCA9Q8IUA7 1624 aa25.62■■□□□ 1.69
RNF220-218ENST00000497469 MED1Q15648 1581 aaPredicted RBP25.6■■□□□ 1.69
RNF220-218ENST00000497469 CEBPAP49715 358 aaPredicted RBP25.58■■□□□ 1.69
RNF220-218ENST00000497469 IQSEC2Q5JU85 1478 aa25.57■■□□□ 1.68
RNF220-218ENST00000497469 PTPRTO14522 1441 aa25.54■■□□□ 1.68
RNF220-218ENST00000497469 AKNAQ7Z591 1439 aa25.54■■□□□ 1.68
RNF220-218ENST00000497469 UBAP1LF5GYI3 381 aa25.53■■□□□ 1.68
RNF220-218ENST00000497469 RICTORQ6R327 1708 aa25.51■■□□□ 1.67
RNF220-218ENST00000497469 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
RNF220-218ENST00000497469 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
RNF220-218ENST00000497469 UHRF1BP1Q6BDS2 1440 aa25.49■■□□□ 1.67
RNF220-218ENST00000497469 ZFYVE16Q7Z3T8 1539 aa25.47■■□□□ 1.67
RNF220-218ENST00000497469 ATP10BO94823 1461 aa25.46■■□□□ 1.67
RNF220-218ENST00000497469 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
RNF220-218ENST00000497469 FHOD3Q2V2M9 1422 aa25.41■■□□□ 1.66
RNF220-218ENST00000497469 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
RNF220-218ENST00000497469 EFCAB5A4FU69 1503 aa25.39■■□□□ 1.66
RNF220-218ENST00000497469 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
RNF220-218ENST00000497469 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
RNF220-218ENST00000497469 HSPA1LP34931 641 aa25.37■■□□□ 1.65
RNF220-218ENST00000497469 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms