RNA–Protein interactions for RNA: ENST00000497410.5

BRD9-214, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,916 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-214ENST00000497410 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
BRD9-214ENST00000497410 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
BRD9-214ENST00000497410 VPS8Q8N3P4 1428 aa26.31■■□□□ 1.8
BRD9-214ENST00000497410 EFCAB5A4FU69 1503 aa26.31■■□□□ 1.8
BRD9-214ENST00000497410 IQGAP2Q13576 1575 aa26.29■■□□□ 1.8
BRD9-214ENST00000497410 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
BRD9-214ENST00000497410 KIAA0586Q9BVV6 1533 aa26.25■■□□□ 1.79
BRD9-214ENST00000497410 SAMD9Q5K651 1589 aa26.25■■□□□ 1.79
BRD9-214ENST00000497410 CEP170Q5SW79 1584 aa26.25■■□□□ 1.79
BRD9-214ENST00000497410 NUP160Q12769 1436 aa26.24■■□□□ 1.79
BRD9-214ENST00000497410 CHD1O14646 1710 aa26.21■■□□□ 1.79
BRD9-214ENST00000497410 FBLN2P98095 1184 aa26.18■■□□□ 1.78
BRD9-214ENST00000497410 UGGT2Q9NYU1 1516 aa26.18■■□□□ 1.78
BRD9-214ENST00000497410 FHOD3Q2V2M9 1422 aa26.11■■□□□ 1.77
BRD9-214ENST00000497410 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
BRD9-214ENST00000497410 DISP1Q96F81 1524 aa26.03■■□□□ 1.76
BRD9-214ENST00000497410 KIAA0556O60303 1618 aa26.03■■□□□ 1.76
BRD9-214ENST00000497410 FMN1Q68DA7 1419 aa26.03■■□□□ 1.76
BRD9-214ENST00000497410 PCF11O94913 1555 aaKnown RBP26■■□□□ 1.75
BRD9-214ENST00000497410 CASKIN1Q8WXD9 1431 aa25.97■■□□□ 1.75
BRD9-214ENST00000497410 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
BRD9-214ENST00000497410 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
BRD9-214ENST00000497410 APLP2Q06481 763 aa25.94■■□□□ 1.74
BRD9-214ENST00000497410 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
BRD9-214ENST00000497410 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
BRD9-214ENST00000497410 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
BRD9-214ENST00000497410 PPARGC1BQ86YN6 1023 aaKnown RBP25.92■■□□□ 1.74
BRD9-214ENST00000497410 CARMIL2Q6F5E8 1435 aa25.9■■□□□ 1.74
BRD9-214ENST00000497410 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
BRD9-214ENST00000497410 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
BRD9-214ENST00000497410 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
BRD9-214ENST00000497410 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.72
BRD9-214ENST00000497410 LRRIQ1Q96JM4 1722 aa25.81■■□□□ 1.72
BRD9-214ENST00000497410 HECW1Q76N89 1606 aa25.8■■□□□ 1.72
BRD9-214ENST00000497410 KANK4Q5T7N3 995 aaPredicted RBP25.77■■□□□ 1.72
BRD9-214ENST00000497410 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
BRD9-214ENST00000497410 RAPGEF6Q8TEU7 1601 aa25.75■■□□□ 1.71
BRD9-214ENST00000497410 LRRC9Q6ZRR7 1453 aa25.74■■□□□ 1.71
BRD9-214ENST00000497410 TTBK1Q5TCY1 1321 aaPredicted RBP25.74■■□□□ 1.71
BRD9-214ENST00000497410 CCDC18Q5T9S5 1454 aa25.73■■□□□ 1.71
BRD9-214ENST00000497410 ATP1B4Q9UN42 357 aaPredicted RBP25.73■■□□□ 1.71
BRD9-214ENST00000497410 EPRSP07814 1512 aaKnown RBP25.69■■□□□ 1.7
BRD9-214ENST00000497410 ERCC6L2Q5T890 1561 aa25.69■■□□□ 1.7
BRD9-214ENST00000497410 ABCA8O94911 1581 aa25.67■■□□□ 1.7
BRD9-214ENST00000497410 NUP153P49790 1475 aaKnown RBP25.67■■□□□ 1.7
BRD9-214ENST00000497410 PLB1Q6P1J6 1458 aa25.66■■□□□ 1.7
BRD9-214ENST00000497410 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
BRD9-214ENST00000497410 PTPRGP23470 1445 aa25.65■■□□□ 1.7
BRD9-214ENST00000497410 CDK13Q14004 1512 aaKnown RBP25.61■■□□□ 1.69
BRD9-214ENST00000497410 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
BRD9-214ENST00000497410 MAGI3Q5TCQ9 1506 aa25.56■■□□□ 1.68
BRD9-214ENST00000497410 MTUS2Q5JR59 1369 aa25.56■■□□□ 1.68
BRD9-214ENST00000497410 UACAQ9BZF9 1416 aa25.52■■□□□ 1.68
BRD9-214ENST00000497410 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
BRD9-214ENST00000497410 SUPT6HQ7KZ85 1726 aaKnown RBP25.51■■□□□ 1.67
BRD9-214ENST00000497410 ABCC2Q92887 1545 aa25.48■■□□□ 1.67
BRD9-214ENST00000497410 PHLDB1Q86UU1 1377 aa25.48■■□□□ 1.67
BRD9-214ENST00000497410 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
BRD9-214ENST00000497410 ATP10BO94823 1461 aa25.46■■□□□ 1.67
BRD9-214ENST00000497410 ARID3CA6NKF2 412 aa25.45■■□□□ 1.67
BRD9-214ENST00000497410 NCOA2Q15596 1464 aa25.45■■□□□ 1.66
BRD9-214ENST00000497410 UHRF1BP1LA0JNW5 1464 aa25.44■■□□□ 1.66
BRD9-214ENST00000497410 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
BRD9-214ENST00000497410 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
BRD9-214ENST00000497410 TROQ12816 1431 aaPredicted RBP25.4■■□□□ 1.66
BRD9-214ENST00000497410 ADCY10Q96PN6 1610 aa25.38■■□□□ 1.65
BRD9-214ENST00000497410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.37■■□□□ 1.65
BRD9-214ENST00000497410 HNRNPUL2Q1KMD3 747 aaKnown RBP25.37■■□□□ 1.65
BRD9-214ENST00000497410 HRCP23327 699 aa25.36■■□□□ 1.65
BRD9-214ENST00000497410 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
BRD9-214ENST00000497410 KDM5BQ9UGL1 1544 aa25.33■■□□□ 1.65
BRD9-214ENST00000497410 FGD6Q6ZV73 1430 aa25.32■■□□□ 1.64
BRD9-214ENST00000497410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.3■■□□□ 1.64
BRD9-214ENST00000497410 ZCCHC11Q5TAX3 1644 aaKnown RBP25.3■■□□□ 1.64
BRD9-214ENST00000497410 PLEKHD1A6NEE1 506 aa25.29■■□□□ 1.64
BRD9-214ENST00000497410 KIF14Q15058 1648 aa25.28■■□□□ 1.64
BRD9-214ENST00000497410 MIA2Q96PC5 1412 aa25.24■■□□□ 1.63
BRD9-214ENST00000497410 PTPN23Q9H3S7 1636 aa25.22■■□□□ 1.63
BRD9-214ENST00000497410 ABCC10Q5T3U5 1492 aa25.21■■□□□ 1.63
BRD9-214ENST00000497410 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
BRD9-214ENST00000497410 ITSN2Q9NZM3 1697 aa25.21■■□□□ 1.63
BRD9-214ENST00000497410 RIMBP3CA6NJZ7 1639 aa25.18■■□□□ 1.62
BRD9-214ENST00000497410 RIMBP3BA6NNM3 1639 aa25.18■■□□□ 1.62
BRD9-214ENST00000497410 RIMBP3Q9UFD9 1639 aa25.18■■□□□ 1.62
BRD9-214ENST00000497410 GPATCH8Q9UKJ3 1502 aaKnown RBP25.16■■□□□ 1.62
BRD9-214ENST00000497410 FAM50AQ14320 339 aaKnown RBP25.16■■□□□ 1.62
BRD9-214ENST00000497410 CDC42BPAQ5VT25 1732 aa25.15■■□□□ 1.62
BRD9-214ENST00000497410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.09■■□□□ 1.61
BRD9-214ENST00000497410 TTC37Q6PGP7 1564 aa25.07■■□□□ 1.6
BRD9-214ENST00000497410 WDR7Q9Y4E6 1490 aa25.07■■□□□ 1.6
BRD9-214ENST00000497410 PREX2Q70Z35 1606 aa25.06■■□□□ 1.6
BRD9-214ENST00000497410 ITGAEP38570 1179 aa25.05■■□□□ 1.6
BRD9-214ENST00000497410 CFDP1Q9UEE9 299 aaPredicted RBP25.04■■□□□ 1.6
BRD9-214ENST00000497410 CDC42BPBQ9Y5S2 1711 aa25.04■■□□□ 1.6
BRD9-214ENST00000497410 CAMSAP2Q08AD1 1489 aa25.03■■□□□ 1.6
BRD9-214ENST00000497410 MYO5CQ9NQX4 1742 aa25.02■■□□□ 1.6
BRD9-214ENST00000497410 ASXL2Q76L83 1435 aa25.01■■□□□ 1.59
BRD9-214ENST00000497410 PTPRKQ15262 1439 aa25.01■■□□□ 1.59
BRD9-214ENST00000497410 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
BRD9-214ENST00000497410 NPM1P06748 294 aaKnown RBP eCLIP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms