RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
COL1A2-212ENST00000497316 JPH4Q96JJ6 628 aa27.05■■□□□ 1.92
COL1A2-212ENST00000497316 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
COL1A2-212ENST00000497316 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.91
COL1A2-212ENST00000497316 EEA1Q15075 1411 aa27■■□□□ 1.91
COL1A2-212ENST00000497316 TRHP20396 242 aaPredicted RBP27■■□□□ 1.91
COL1A2-212ENST00000497316 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
COL1A2-212ENST00000497316 PRXQ9BXM0 1461 aa26.98■■□□□ 1.91
COL1A2-212ENST00000497316 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
COL1A2-212ENST00000497316 IQGAP2Q13576 1575 aa26.9■■□□□ 1.9
COL1A2-212ENST00000497316 CTTNBP2Q8WZ74 1663 aa26.8■■□□□ 1.88
COL1A2-212ENST00000497316 CARMIL2Q6F5E8 1435 aa26.79■■□□□ 1.88
COL1A2-212ENST00000497316 UGGT2Q9NYU1 1516 aa26.78■■□□□ 1.88
COL1A2-212ENST00000497316 FAM9AQ8IZU1 332 aaPredicted RBP26.73■■□□□ 1.87
COL1A2-212ENST00000497316 DISP1Q96F81 1524 aa26.71■■□□□ 1.87
COL1A2-212ENST00000497316 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
COL1A2-212ENST00000497316 KIF21BO75037 1637 aa26.69■■□□□ 1.86
COL1A2-212ENST00000497316 PTPRGP23470 1445 aa26.67■■□□□ 1.86
COL1A2-212ENST00000497316 KIAA0556O60303 1618 aa26.65■■□□□ 1.86
COL1A2-212ENST00000497316 GOLGA3Q08378 1498 aa26.63■■□□□ 1.85
COL1A2-212ENST00000497316 ADCY10Q96PN6 1610 aa26.57■■□□□ 1.84
COL1A2-212ENST00000497316 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
COL1A2-212ENST00000497316 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
COL1A2-212ENST00000497316 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
COL1A2-212ENST00000497316 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
COL1A2-212ENST00000497316 SAMD9Q5K651 1589 aa26.47■■□□□ 1.83
COL1A2-212ENST00000497316 MAPKBP1O60336 1514 aa26.47■■□□□ 1.83
COL1A2-212ENST00000497316 ABCC2Q92887 1545 aa26.45■■□□□ 1.83
COL1A2-212ENST00000497316 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
COL1A2-212ENST00000497316 KDM5BQ9UGL1 1544 aa26.38■■□□□ 1.81
COL1A2-212ENST00000497316 ABCA8O94911 1581 aa26.37■■□□□ 1.81
COL1A2-212ENST00000497316 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
COL1A2-212ENST00000497316 EFCAB5A4FU69 1503 aa26.36■■□□□ 1.81
COL1A2-212ENST00000497316 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
COL1A2-212ENST00000497316 ABCC10Q5T3U5 1492 aa26.33■■□□□ 1.81
COL1A2-212ENST00000497316 KIF13AQ9H1H9 1805 aa26.31■■□□□ 1.8
COL1A2-212ENST00000497316 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
COL1A2-212ENST00000497316 RANGAP1P46060 587 aaPredicted RBP26.29■■□□□ 1.8
COL1A2-212ENST00000497316 DIP2BQ9P265 1576 aa26.28■■□□□ 1.8
COL1A2-212ENST00000497316 ZCCHC11Q5TAX3 1644 aaKnown RBP26.28■■□□□ 1.8
COL1A2-212ENST00000497316 ASXL2Q76L83 1435 aa26.27■■□□□ 1.8
COL1A2-212ENST00000497316 FHOD3Q2V2M9 1422 aa26.26■■□□□ 1.79
COL1A2-212ENST00000497316 FAM69CQ0P6D2 419 aa26.25■■□□□ 1.79
COL1A2-212ENST00000497316 RAPGEF6Q8TEU7 1601 aa26.21■■□□□ 1.79
COL1A2-212ENST00000497316 ARHGAP35Q9NRY4 1499 aa26.2■■□□□ 1.78
COL1A2-212ENST00000497316 GLI2P10070 1586 aa26.17■■□□□ 1.78
COL1A2-212ENST00000497316 ATP10BO94823 1461 aa26.15■■□□□ 1.78
COL1A2-212ENST00000497316 WDR7Q9Y4E6 1490 aa26.14■■□□□ 1.78
COL1A2-212ENST00000497316 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
COL1A2-212ENST00000497316 EPRSP07814 1512 aaKnown RBP26.13■■□□□ 1.77
COL1A2-212ENST00000497316 FMN1Q68DA7 1419 aa26.12■■□□□ 1.77
COL1A2-212ENST00000497316 NUP153P49790 1475 aaKnown RBP26.11■■□□□ 1.77
COL1A2-212ENST00000497316 ARID3CA6NKF2 412 aa26.02■■□□□ 1.76
COL1A2-212ENST00000497316 CLIP1P30622 1438 aa26.02■■□□□ 1.76
COL1A2-212ENST00000497316 MAP3K4Q9Y6R4 1608 aa26.01■■□□□ 1.75
COL1A2-212ENST00000497316 TSPOAP1O95153 1857 aa25.99■■□□□ 1.75
COL1A2-212ENST00000497316 HECW1Q76N89 1606 aa25.97■■□□□ 1.75
COL1A2-212ENST00000497316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.97■■□□□ 1.75
COL1A2-212ENST00000497316 HNRNPUL2Q1KMD3 747 aaKnown RBP25.97■■□□□ 1.75
COL1A2-212ENST00000497316 PPRC1Q5VV67 1664 aaKnown RBP25.96■■□□□ 1.75
COL1A2-212ENST00000497316 KCNH8Q96L42 1107 aa25.96■■□□□ 1.75
COL1A2-212ENST00000497316 CFAP43Q8NDM7 1665 aa25.94■■□□□ 1.74
COL1A2-212ENST00000497316 KDM6BO15054 1643 aa25.94■■□□□ 1.74
COL1A2-212ENST00000497316 PLEKHD1A6NEE1 506 aa25.92■■□□□ 1.74
COL1A2-212ENST00000497316 TEX14Q8IWB6 1497 aa25.91■■□□□ 1.74
COL1A2-212ENST00000497316 CASKIN1Q8WXD9 1431 aa25.9■■□□□ 1.74
COL1A2-212ENST00000497316 CD109Q6YHK3 1445 aa25.89■■□□□ 1.74
COL1A2-212ENST00000497316 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
COL1A2-212ENST00000497316 CDK13Q14004 1512 aaKnown RBP25.88■■□□□ 1.73
COL1A2-212ENST00000497316 MAGI3Q5TCQ9 1506 aa25.88■■□□□ 1.73
COL1A2-212ENST00000497316 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
COL1A2-212ENST00000497316 ABCA9Q8IUA7 1624 aa25.88■■□□□ 1.73
COL1A2-212ENST00000497316 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
COL1A2-212ENST00000497316 PCF11O94913 1555 aaKnown RBP25.85■■□□□ 1.73
COL1A2-212ENST00000497316 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
COL1A2-212ENST00000497316 FYCO1Q9BQS8 1478 aa25.83■■□□□ 1.73
COL1A2-212ENST00000497316 CCDC18Q5T9S5 1454 aa25.81■■□□□ 1.72
COL1A2-212ENST00000497316 LRRIQ1Q96JM4 1722 aa25.81■■□□□ 1.72
COL1A2-212ENST00000497316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.74■■□□□ 1.71
COL1A2-212ENST00000497316 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
COL1A2-212ENST00000497316 PHLDB1Q86UU1 1377 aa25.73■■□□□ 1.71
COL1A2-212ENST00000497316 COL17A1Q9UMD9 1497 aaPredicted RBP25.72■■□□□ 1.71
COL1A2-212ENST00000497316 NEO1Q92859 1461 aa25.69■■□□□ 1.7
COL1A2-212ENST00000497316 TTC37Q6PGP7 1564 aa25.69■■□□□ 1.7
COL1A2-212ENST00000497316 ARAP3Q8WWN8 1544 aa25.67■■□□□ 1.7
COL1A2-212ENST00000497316 KIF14Q15058 1648 aa25.66■■□□□ 1.7
COL1A2-212ENST00000497316 PLCH2O75038 1416 aa25.62■■□□□ 1.69
COL1A2-212ENST00000497316 VPS8Q8N3P4 1428 aa25.61■■□□□ 1.69
COL1A2-212ENST00000497316 CFAP74Q9C0B2 1584 aa25.6■■□□□ 1.69
COL1A2-212ENST00000497316 FANCAO15360 1455 aa25.59■■□□□ 1.69
COL1A2-212ENST00000497316 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
COL1A2-212ENST00000497316 AKNAQ7Z591 1439 aa25.55■■□□□ 1.68
COL1A2-212ENST00000497316 KDM4FA0A1W2PPD8 638 aa25.55■■□□□ 1.68
COL1A2-212ENST00000497316 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
COL1A2-212ENST00000497316 MTUS2Q5JR59 1369 aa25.5■■□□□ 1.67
COL1A2-212ENST00000497316 DENND4BO75064 1496 aaPredicted RBP25.48■■□□□ 1.67
COL1A2-212ENST00000497316 EHBP1L1Q8N3D4 1523 aa25.47■■□□□ 1.67
COL1A2-212ENST00000497316 PREX2Q70Z35 1606 aa25.46■■□□□ 1.67
COL1A2-212ENST00000497316 RAPGEF3O95398 923 aa25.46■■□□□ 1.67
COL1A2-212ENST00000497316 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 402.1 ms