RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	EEA1	Q15075	1411 aa		13.54	□□□□□ -0.24
EFNA1-205	ENST00000497282	ERCC6L2	Q5T890	1561 aa		13.52	□□□□□ -0.25
EFNA1-205	ENST00000497282	KIAA0586	Q9BVV6	1533 aa		13.5	□□□□□ -0.25
EFNA1-205	ENST00000497282	CTTNBP2	Q8WZ74	1663 aa		13.5	□□□□□ -0.25
EFNA1-205	ENST00000497282	ARAP1	Q96P48	1450 aa		13.49	□□□□□ -0.25
EFNA1-205	ENST00000497282	IQGAP2	Q13576	1575 aa		13.48	□□□□□ -0.25
EFNA1-205	ENST00000497282	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.47	□□□□□ -0.25
EFNA1-205	ENST00000497282	CSRNP3	Q8WYN3	585 aa		13.47	□□□□□ -0.25
EFNA1-205	ENST00000497282	KIF21B	O75037	1637 aa		13.46	□□□□□ -0.25
EFNA1-205	ENST00000497282	PRG4	Q92954	1404 aa	Predicted RBP	13.43	□□□□□ -0.26
EFNA1-205	ENST00000497282	JPH4	Q96JJ6	628 aa		13.41	□□□□□ -0.26
EFNA1-205	ENST00000497282	UGGT2	Q9NYU1	1516 aa		13.4	□□□□□ -0.26
EFNA1-205	ENST00000497282	DISP1	Q96F81	1524 aa		13.38	□□□□□ -0.27
EFNA1-205	ENST00000497282	KIAA0556	O60303	1618 aa		13.37	□□□□□ -0.27
EFNA1-205	ENST00000497282	CYB5RL	Q6IPT4	315 aa		13.36	□□□□□ -0.27
EFNA1-205	ENST00000497282	GOLGA3	Q08378	1498 aa		13.35	□□□□□ -0.27
EFNA1-205	ENST00000497282	CARMIL2	Q6F5E8	1435 aa		13.31	□□□□□ -0.28
EFNA1-205	ENST00000497282	SAMD9	Q5K651	1589 aa		13.31	□□□□□ -0.28
EFNA1-205	ENST00000497282	EHMT2	Q96KQ7	1210 aa		13.3	□□□□□ -0.28
EFNA1-205	ENST00000497282	ADCY10	Q96PN6	1610 aa		13.28	□□□□□ -0.28
EFNA1-205	ENST00000497282	TNIK	Q9UKE5	1360 aa		13.28	□□□□□ -0.28
EFNA1-205	ENST00000497282	PTPRG	P23470	1445 aa		13.25	□□□□□ -0.29
EFNA1-205	ENST00000497282	EFCAB5	A4FU69	1503 aa		13.23	□□□□□ -0.29
EFNA1-205	ENST00000497282	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.22	□□□□□ -0.29
EFNA1-205	ENST00000497282	UBTF	P17480	764 aa	Known RBP	13.22	□□□□□ -0.29
EFNA1-205	ENST00000497282	ABCA8	O94911	1581 aa		13.21	□□□□□ -0.29
EFNA1-205	ENST00000497282	ABCC2	Q92887	1545 aa		13.21	□□□□□ -0.29
EFNA1-205	ENST00000497282	PLB1	Q6P1J6	1458 aa		13.2	□□□□□ -0.3
EFNA1-205	ENST00000497282	FHOD3	Q2V2M9	1422 aa		13.2	□□□□□ -0.3
EFNA1-205	ENST00000497282	UHRF1BP1L	A0JNW5	1464 aa		13.19	□□□□□ -0.3
EFNA1-205	ENST00000497282	ARHGAP35	Q9NRY4	1499 aa		13.19	□□□□□ -0.3
EFNA1-205	ENST00000497282	RANGAP1	P46060	587 aa	Predicted RBP	13.19	□□□□□ -0.3
EFNA1-205	ENST00000497282	P3H3	Q8IVL6	736 aa		13.19	□□□□□ -0.3
EFNA1-205	ENST00000497282	UACA	Q9BZF9	1416 aa		13.19	□□□□□ -0.3
EFNA1-205	ENST00000497282	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.16	□□□□□ -0.3
EFNA1-205	ENST00000497282	MAPKBP1	O60336	1514 aa		13.15	□□□□□ -0.3
EFNA1-205	ENST00000497282	RAPGEF6	Q8TEU7	1601 aa		13.15	□□□□□ -0.3
EFNA1-205	ENST00000497282	KDM5B	Q9UGL1	1544 aa		13.14	□□□□□ -0.31
EFNA1-205	ENST00000497282	KIF13A	Q9H1H9	1805 aa		13.11	□□□□□ -0.31
EFNA1-205	ENST00000497282	LOC105371045	A0A1W2PR82	267 aa		13.1	□□□□□ -0.31
EFNA1-205	ENST00000497282	CLIP1	P30622	1438 aa		13.1	□□□□□ -0.31
EFNA1-205	ENST00000497282	DIP2B	Q9P265	1576 aa		13.09	□□□□□ -0.31
EFNA1-205	ENST00000497282	NUP153	P49790	1475 aa	Known RBP	13.09	□□□□□ -0.31
EFNA1-205	ENST00000497282	CEP162	Q5TB80	1403 aa		13.08	□□□□□ -0.32
EFNA1-205	ENST00000497282	PCF11	O94913	1555 aa	Known RBP	13.07	□□□□□ -0.32
EFNA1-205	ENST00000497282	NPM1	P06748	294 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
EFNA1-205	ENST00000497282	LRRIQ1	Q96JM4	1722 aa		13.07	□□□□□ -0.32
EFNA1-205	ENST00000497282	ASXL2	Q76L83	1435 aa		13.06	□□□□□ -0.32
EFNA1-205	ENST00000497282	ATP10B	O94823	1461 aa		13.06	□□□□□ -0.32
EFNA1-205	ENST00000497282	ABCC10	Q5T3U5	1492 aa		13.06	□□□□□ -0.32
EFNA1-205	ENST00000497282	HECW1	Q76N89	1606 aa		13.06	□□□□□ -0.32
EFNA1-205	ENST00000497282	FMN1	Q68DA7	1419 aa		13.05	□□□□□ -0.32
EFNA1-205	ENST00000497282	TRH	P20396	242 aa	Predicted RBP	13.04	□□□□□ -0.32
EFNA1-205	ENST00000497282	CDK13	Q14004	1512 aa	Known RBP	13.03	□□□□□ -0.32
EFNA1-205	ENST00000497282	ARID3C	A6NKF2	412 aa		13.03	□□□□□ -0.32
EFNA1-205	ENST00000497282	WDR7	Q9Y4E6	1490 aa		13.03	□□□□□ -0.32
EFNA1-205	ENST00000497282	GLI2	P10070	1586 aa		13	□□□□□ -0.33
EFNA1-205	ENST00000497282	EPRS	P07814	1512 aa	Known RBP	13	□□□□□ -0.33
EFNA1-205	ENST00000497282	MAP3K4	Q9Y6R4	1608 aa		12.99	□□□□□ -0.33
EFNA1-205	ENST00000497282	FYCO1	Q9BQS8	1478 aa		12.98	□□□□□ -0.33
EFNA1-205	ENST00000497282	CASKIN1	Q8WXD9	1431 aa		12.98	□□□□□ -0.33
EFNA1-205	ENST00000497282	PPRC1	Q5VV67	1664 aa	Known RBP	12.98	□□□□□ -0.33
EFNA1-205	ENST00000497282	TSPOAP1	O95153	1857 aa		12.96	□□□□□ -0.33
EFNA1-205	ENST00000497282	FAM69C	Q0P6D2	419 aa		12.96	□□□□□ -0.33
EFNA1-205	ENST00000497282	CFAP43	Q8NDM7	1665 aa		12.95	□□□□□ -0.34
EFNA1-205	ENST00000497282	ABCA9	Q8IUA7	1624 aa		12.94	□□□□□ -0.34
EFNA1-205	ENST00000497282	CCDC18	Q5T9S5	1454 aa		12.93	□□□□□ -0.34
EFNA1-205	ENST00000497282	MAGI3	Q5TCQ9	1506 aa		12.93	□□□□□ -0.34
EFNA1-205	ENST00000497282	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.92	□□□□□ -0.34
EFNA1-205	ENST00000497282	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.92	□□□□□ -0.34
EFNA1-205	ENST00000497282	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.92	□□□□□ -0.34
EFNA1-205	ENST00000497282	VPS8	Q8N3P4	1428 aa		12.91	□□□□□ -0.34
EFNA1-205	ENST00000497282	KIF14	Q15058	1648 aa		12.91	□□□□□ -0.34
EFNA1-205	ENST00000497282	TTC37	Q6PGP7	1564 aa		12.9	□□□□□ -0.34
EFNA1-205	ENST00000497282	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
EFNA1-205	ENST00000497282	KCNH8	Q96L42	1107 aa		12.89	□□□□□ -0.35
EFNA1-205	ENST00000497282	TRO	Q12816	1431 aa	Predicted RBP	12.88	□□□□□ -0.35
EFNA1-205	ENST00000497282	PLEKHD1	A6NEE1	506 aa		12.86	□□□□□ -0.35
EFNA1-205	ENST00000497282	CD109	Q6YHK3	1445 aa		12.86	□□□□□ -0.35
EFNA1-205	ENST00000497282	TIAM1	Q13009	1591 aa		12.86	□□□□□ -0.35
EFNA1-205	ENST00000497282	KDM6B	O15054	1643 aa		12.84	□□□□□ -0.35
EFNA1-205	ENST00000497282	MYO5C	Q9NQX4	1742 aa		12.84	□□□□□ -0.35
EFNA1-205	ENST00000497282	TEX14	Q8IWB6	1497 aa		12.84	□□□□□ -0.35
EFNA1-205	ENST00000497282	EHBP1L1	Q8N3D4	1523 aa		12.82	□□□□□ -0.36
EFNA1-205	ENST00000497282	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.81	□□□□□ -0.36
EFNA1-205	ENST00000497282	PREX2	Q70Z35	1606 aa		12.8	□□□□□ -0.36
EFNA1-205	ENST00000497282	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.8	□□□□□ -0.36
EFNA1-205	ENST00000497282	CDC42BPA	Q5VT25	1732 aa		12.8	□□□□□ -0.36
EFNA1-205	ENST00000497282	CFAP74	Q9C0B2	1584 aa		12.79	□□□□□ -0.36
EFNA1-205	ENST00000497282	CDC42BPB	Q9Y5S2	1711 aa		12.79	□□□□□ -0.36
EFNA1-205	ENST00000497282	MAP3K1	Q13233	1512 aa		12.78	□□□□□ -0.36
EFNA1-205	ENST00000497282	ARAP3	Q8WWN8	1544 aa		12.78	□□□□□ -0.36
EFNA1-205	ENST00000497282	MTUS2	Q5JR59	1369 aa		12.77	□□□□□ -0.37
EFNA1-205	ENST00000497282	PLCH2	O75038	1416 aa		12.77	□□□□□ -0.37
EFNA1-205	ENST00000497282	FANCA	O15360	1455 aa		12.77	□□□□□ -0.37
EFNA1-205	ENST00000497282	NEO1	Q92859	1461 aa		12.77	□□□□□ -0.37
EFNA1-205	ENST00000497282	LRRC9	Q6ZRR7	1453 aa		12.76	□□□□□ -0.37
EFNA1-205	ENST00000497282	FRMPD1	Q5SYB0	1578 aa		12.76	□□□□□ -0.37
EFNA1-205	ENST00000497282	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.76	□□□□□ -0.37
EFNA1-205	ENST00000497282	ARHGAP5	Q13017	1502 aa		12.74	□□□□□ -0.37

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