RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 CUL7Q14999 1698 aa21.86■■□□□ 1.09
PPM1F-209ENST00000497072 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
PPM1F-209ENST00000497072 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
PPM1F-209ENST00000497072 KIAA0586Q9BVV6 1533 aa21.77■■□□□ 1.08
PPM1F-209ENST00000497072 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
PPM1F-209ENST00000497072 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
PPM1F-209ENST00000497072 RAPGEF2Q9Y4G8 1499 aa21.59■■□□□ 1.05
PPM1F-209ENST00000497072 IQGAP2Q13576 1575 aa21.59■■□□□ 1.05
PPM1F-209ENST00000497072 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
PPM1F-209ENST00000497072 PTPRGP23470 1445 aa21.57■■□□□ 1.04
PPM1F-209ENST00000497072 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
PPM1F-209ENST00000497072 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
PPM1F-209ENST00000497072 MAPKBP1O60336 1514 aa21.52■■□□□ 1.04
PPM1F-209ENST00000497072 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
PPM1F-209ENST00000497072 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
PPM1F-209ENST00000497072 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
PPM1F-209ENST00000497072 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
PPM1F-209ENST00000497072 DISP1Q96F81 1524 aa21.42■■□□□ 1.02
PPM1F-209ENST00000497072 DIP2BQ9P265 1576 aa21.41■■□□□ 1.02
PPM1F-209ENST00000497072 ABCC2Q92887 1545 aa21.4■■□□□ 1.02
PPM1F-209ENST00000497072 UACAQ9BZF9 1416 aa21.39■■□□□ 1.02
PPM1F-209ENST00000497072 CTTNBP2Q8WZ74 1663 aa21.39■■□□□ 1.01
PPM1F-209ENST00000497072 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
PPM1F-209ENST00000497072 UHRF1BP1LA0JNW5 1464 aa21.38■■□□□ 1.01
PPM1F-209ENST00000497072 KIAA0556O60303 1618 aa21.37■■□□□ 1.01
PPM1F-209ENST00000497072 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
PPM1F-209ENST00000497072 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
PPM1F-209ENST00000497072 PLB1Q6P1J6 1458 aa21.34■■□□□ 1.01
PPM1F-209ENST00000497072 FAM9AQ8IZU1 332 aaPredicted RBP21.34■■□□□ 1.01
PPM1F-209ENST00000497072 ASXL2Q76L83 1435 aa21.31■■□□□ 1
PPM1F-209ENST00000497072 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
PPM1F-209ENST00000497072 TSPOAP1O95153 1857 aa21.29■■□□□ 1
PPM1F-209ENST00000497072 KDM5BQ9UGL1 1544 aa21.26■□□□□ 0.99
PPM1F-209ENST00000497072 EEA1Q15075 1411 aa21.26■□□□□ 0.99
PPM1F-209ENST00000497072 KDM6BO15054 1643 aa21.24■□□□□ 0.99
PPM1F-209ENST00000497072 GLI2P10070 1586 aa21.23■□□□□ 0.99
PPM1F-209ENST00000497072 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
PPM1F-209ENST00000497072 EPRSP07814 1512 aaKnown RBP21.18■□□□□ 0.98
PPM1F-209ENST00000497072 P3H3Q8IVL6 736 aa21.16■□□□□ 0.98
PPM1F-209ENST00000497072 ABCA8O94911 1581 aa21.14■□□□□ 0.98
PPM1F-209ENST00000497072 WDR7Q9Y4E6 1490 aa21.14■□□□□ 0.98
PPM1F-209ENST00000497072 TEX14Q8IWB6 1497 aa21.13■□□□□ 0.97
PPM1F-209ENST00000497072 MAP3K4Q9Y6R4 1608 aa21.1■□□□□ 0.97
PPM1F-209ENST00000497072 RANGAP1P46060 587 aaPredicted RBP21.09■□□□□ 0.97
PPM1F-209ENST00000497072 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
PPM1F-209ENST00000497072 PPRC1Q5VV67 1664 aaKnown RBP21.09■□□□□ 0.97
PPM1F-209ENST00000497072 SAMD9Q5K651 1589 aa21.06■□□□□ 0.96
PPM1F-209ENST00000497072 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
PPM1F-209ENST00000497072 CD109Q6YHK3 1445 aa21.03■□□□□ 0.96
PPM1F-209ENST00000497072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
PPM1F-209ENST00000497072 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
PPM1F-209ENST00000497072 KIF21BO75037 1637 aa21.02■□□□□ 0.96
PPM1F-209ENST00000497072 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
PPM1F-209ENST00000497072 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
PPM1F-209ENST00000497072 RAPGEF6Q8TEU7 1601 aa20.99■□□□□ 0.95
PPM1F-209ENST00000497072 ATP10BO94823 1461 aa20.99■□□□□ 0.95
PPM1F-209ENST00000497072 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
PPM1F-209ENST00000497072 MAGI3Q5TCQ9 1506 aa20.97■□□□□ 0.95
PPM1F-209ENST00000497072 FHOD3Q2V2M9 1422 aa20.95■□□□□ 0.95
PPM1F-209ENST00000497072 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
PPM1F-209ENST00000497072 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
PPM1F-209ENST00000497072 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
PPM1F-209ENST00000497072 KDM4FA0A1W2PPD8 638 aa20.91■□□□□ 0.94
PPM1F-209ENST00000497072 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
PPM1F-209ENST00000497072 PLEKHD1A6NEE1 506 aa20.87■□□□□ 0.93
PPM1F-209ENST00000497072 ABCA9Q8IUA7 1624 aa20.85■□□□□ 0.93
PPM1F-209ENST00000497072 PHLDB1Q86UU1 1377 aa20.84■□□□□ 0.93
PPM1F-209ENST00000497072 ADGRL1O94910 1474 aa20.81■□□□□ 0.92
PPM1F-209ENST00000497072 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
PPM1F-209ENST00000497072 ARAP3Q8WWN8 1544 aa20.79■□□□□ 0.92
PPM1F-209ENST00000497072 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
PPM1F-209ENST00000497072 NEO1Q92859 1461 aa20.76■□□□□ 0.91
PPM1F-209ENST00000497072 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
PPM1F-209ENST00000497072 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
PPM1F-209ENST00000497072 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
PPM1F-209ENST00000497072 CDK13Q14004 1512 aaKnown RBP20.69■□□□□ 0.9
PPM1F-209ENST00000497072 RAPGEF3O95398 923 aa20.69■□□□□ 0.9
PPM1F-209ENST00000497072 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
PPM1F-209ENST00000497072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.67■□□□□ 0.96e-6■■□□□ 13.3
PPM1F-209ENST00000497072 FANCAO15360 1455 aa20.66■□□□□ 0.9
PPM1F-209ENST00000497072 AKNAQ7Z591 1439 aa20.64■□□□□ 0.89
PPM1F-209ENST00000497072 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
PPM1F-209ENST00000497072 TTC37Q6PGP7 1564 aa20.62■□□□□ 0.89
PPM1F-209ENST00000497072 ARID4BQ4LE39 1312 aaPredicted RBP20.6■□□□□ 0.89
PPM1F-209ENST00000497072 CLIP1P30622 1438 aa20.6■□□□□ 0.89
PPM1F-209ENST00000497072 PLCH2O75038 1416 aa20.57■□□□□ 0.88
PPM1F-209ENST00000497072 FRMPD1Q5SYB0 1578 aa20.57■□□□□ 0.88
PPM1F-209ENST00000497072 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
PPM1F-209ENST00000497072 KIF14Q15058 1648 aa20.56■□□□□ 0.88
PPM1F-209ENST00000497072 TROQ12816 1431 aaPredicted RBP20.55■□□□□ 0.88
PPM1F-209ENST00000497072 RICTORQ6R327 1708 aa20.54■□□□□ 0.88
PPM1F-209ENST00000497072 CCDC18Q5T9S5 1454 aa20.54■□□□□ 0.88
PPM1F-209ENST00000497072 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
PPM1F-209ENST00000497072 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
PPM1F-209ENST00000497072 SCAPERQ9BY12 1400 aa20.52■□□□□ 0.87
PPM1F-209ENST00000497072 ARHGEF40Q8TER5 1519 aa20.51■□□□□ 0.87
PPM1F-209ENST00000497072 PCF11O94913 1555 aaKnown RBP20.5■□□□□ 0.87
PPM1F-209ENST00000497072 MAGI2Q86UL8 1455 aa20.49■□□□□ 0.87
PPM1F-209ENST00000497072 ARHGAP5Q13017 1502 aa20.48■□□□□ 0.87
PPM1F-209ENST00000497072 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms