RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
GARNL3-220ENST00000496711 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
GARNL3-220ENST00000496711 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
GARNL3-220ENST00000496711 RRBP1Q9P2E9 1410 aaKnown RBP19.67■□□□□ 0.74
GARNL3-220ENST00000496711 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
GARNL3-220ENST00000496711 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
GARNL3-220ENST00000496711 MRC2Q9UBG0 1479 aa19.62■□□□□ 0.73
GARNL3-220ENST00000496711 FYCO1Q9BQS8 1478 aa19.59■□□□□ 0.73
GARNL3-220ENST00000496711 SAMD9Q5K651 1589 aa19.58■□□□□ 0.73
GARNL3-220ENST00000496711 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
GARNL3-220ENST00000496711 LRRC9Q6ZRR7 1453 aa19.57■□□□□ 0.72
GARNL3-220ENST00000496711 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.72
GARNL3-220ENST00000496711 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
GARNL3-220ENST00000496711 CASKIN1Q8WXD9 1431 aa19.53■□□□□ 0.72
GARNL3-220ENST00000496711 ADAMTS12P58397 1594 aa19.52■□□□□ 0.72
GARNL3-220ENST00000496711 WDR62O43379 1518 aa19.52■□□□□ 0.71
GARNL3-220ENST00000496711 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
GARNL3-220ENST00000496711 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
GARNL3-220ENST00000496711 SNAPC4Q5SXM2 1469 aa19.47■□□□□ 0.71
GARNL3-220ENST00000496711 LRRIQ1Q96JM4 1722 aa19.46■□□□□ 0.71
GARNL3-220ENST00000496711 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
GARNL3-220ENST00000496711 THOC2Q8NI27 1593 aaKnown RBP19.44■□□□□ 0.7
GARNL3-220ENST00000496711 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
GARNL3-220ENST00000496711 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
GARNL3-220ENST00000496711 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
GARNL3-220ENST00000496711 CLSPNQ9HAW4 1339 aa19.41■□□□□ 0.7
GARNL3-220ENST00000496711 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
GARNL3-220ENST00000496711 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
GARNL3-220ENST00000496711 EIF4G3O43432 1585 aaKnown RBP19.37■□□□□ 0.69
GARNL3-220ENST00000496711 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
GARNL3-220ENST00000496711 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
GARNL3-220ENST00000496711 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
GARNL3-220ENST00000496711 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
GARNL3-220ENST00000496711 EHBP1L1Q8N3D4 1523 aa19.31■□□□□ 0.68
GARNL3-220ENST00000496711 ZNF316A6NFI3 1004 aaPredicted RBP19.3■□□□□ 0.68
GARNL3-220ENST00000496711 ITGAEP38570 1179 aa19.3■□□□□ 0.68
GARNL3-220ENST00000496711 DIEXFQ68CQ4 756 aaKnown RBP19.29■□□□□ 0.68
GARNL3-220ENST00000496711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.29■□□□□ 0.68
GARNL3-220ENST00000496711 CCDC18Q5T9S5 1454 aa19.29■□□□□ 0.68
GARNL3-220ENST00000496711 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
GARNL3-220ENST00000496711 RAB3GAP2Q9H2M9 1393 aa19.28■□□□□ 0.68
GARNL3-220ENST00000496711 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
GARNL3-220ENST00000496711 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
GARNL3-220ENST00000496711 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
GARNL3-220ENST00000496711 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
GARNL3-220ENST00000496711 GRIN2AQ12879 1464 aa19.23■□□□□ 0.67
GARNL3-220ENST00000496711 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
GARNL3-220ENST00000496711 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
GARNL3-220ENST00000496711 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
GARNL3-220ENST00000496711 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
GARNL3-220ENST00000496711 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
GARNL3-220ENST00000496711 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
GARNL3-220ENST00000496711 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
GARNL3-220ENST00000496711 MYOM3Q5VTT5 1437 aa19.18■□□□□ 0.66
GARNL3-220ENST00000496711 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
GARNL3-220ENST00000496711 PTPN23Q9H3S7 1636 aa19.15■□□□□ 0.66
GARNL3-220ENST00000496711 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
GARNL3-220ENST00000496711 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
GARNL3-220ENST00000496711 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
GARNL3-220ENST00000496711 CDK13Q14004 1512 aaKnown RBP19.13■□□□□ 0.65
GARNL3-220ENST00000496711 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
GARNL3-220ENST00000496711 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
GARNL3-220ENST00000496711 HFM1A2PYH4 1435 aa19.06■□□□□ 0.64
GARNL3-220ENST00000496711 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
GARNL3-220ENST00000496711 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
GARNL3-220ENST00000496711 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
GARNL3-220ENST00000496711 NUP160Q12769 1436 aa19.03■□□□□ 0.64
GARNL3-220ENST00000496711 MIA2Q96PC5 1412 aa19.01■□□□□ 0.63
GARNL3-220ENST00000496711 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
GARNL3-220ENST00000496711 NAIPQ13075 1403 aa18.98■□□□□ 0.63
GARNL3-220ENST00000496711 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
GARNL3-220ENST00000496711 AKNAQ7Z591 1439 aa18.95■□□□□ 0.62
GARNL3-220ENST00000496711 CARMIL2Q6F5E8 1435 aa18.95■□□□□ 0.62
GARNL3-220ENST00000496711 ADCY10Q96PN6 1610 aa18.94■□□□□ 0.62
GARNL3-220ENST00000496711 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
GARNL3-220ENST00000496711 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
GARNL3-220ENST00000496711 FBLN2P98095 1184 aa18.92■□□□□ 0.62
GARNL3-220ENST00000496711 DNMT1P26358 1616 aaKnown RBP18.91■□□□□ 0.62
GARNL3-220ENST00000496711 PLB1Q6P1J6 1458 aa18.9■□□□□ 0.62
GARNL3-220ENST00000496711 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
GARNL3-220ENST00000496711 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
GARNL3-220ENST00000496711 MIER1Q8N108 512 aa18.89■□□□□ 0.61
GARNL3-220ENST00000496711 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
GARNL3-220ENST00000496711 TROQ12816 1431 aaPredicted RBP18.88■□□□□ 0.61
GARNL3-220ENST00000496711 CHD1O14646 1710 aa18.88■□□□□ 0.61
GARNL3-220ENST00000496711 ACIN1Q9UKV3 1341 aaKnown RBP18.88■□□□□ 0.61
GARNL3-220ENST00000496711 ABCA8O94911 1581 aa18.87■□□□□ 0.61
GARNL3-220ENST00000496711 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
GARNL3-220ENST00000496711 NEUROD1Q13562 356 aa18.86■□□□□ 0.61
GARNL3-220ENST00000496711 KIF14Q15058 1648 aa18.85■□□□□ 0.61
GARNL3-220ENST00000496711 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
GARNL3-220ENST00000496711 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
GARNL3-220ENST00000496711 KDM6BO15054 1643 aa18.84■□□□□ 0.61
GARNL3-220ENST00000496711 DAPK1P53355 1430 aa18.84■□□□□ 0.61
GARNL3-220ENST00000496711 ADGBQ8N7X0 1667 aa18.82■□□□□ 0.6
GARNL3-220ENST00000496711 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
GARNL3-220ENST00000496711 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
GARNL3-220ENST00000496711 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
GARNL3-220ENST00000496711 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
GARNL3-220ENST00000496711 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms