RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 RAPGEF2Q9Y4G8 1499 aa13.57□□□□□ -0.24
SMARCD3-215ENST00000496530 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
SMARCD3-215ENST00000496530 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
SMARCD3-215ENST00000496530 SHROOM2Q13796 1616 aa13.56□□□□□ -0.24
SMARCD3-215ENST00000496530 EEA1Q15075 1411 aa13.56□□□□□ -0.24
SMARCD3-215ENST00000496530 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
SMARCD3-215ENST00000496530 JPH4Q96JJ6 628 aa13.54□□□□□ -0.24
SMARCD3-215ENST00000496530 PRG4Q92954 1404 aaPredicted RBP13.51□□□□□ -0.25
SMARCD3-215ENST00000496530 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
SMARCD3-215ENST00000496530 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
SMARCD3-215ENST00000496530 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
SMARCD3-215ENST00000496530 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
SMARCD3-215ENST00000496530 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
SMARCD3-215ENST00000496530 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SMARCD3-215ENST00000496530 PRXQ9BXM0 1461 aa13.45□□□□□ -0.26
SMARCD3-215ENST00000496530 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
SMARCD3-215ENST00000496530 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMARCD3-215ENST00000496530 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
SMARCD3-215ENST00000496530 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
SMARCD3-215ENST00000496530 UGGT2Q9NYU1 1516 aa13.39□□□□□ -0.27
SMARCD3-215ENST00000496530 TRHP20396 242 aaPredicted RBP13.38□□□□□ -0.27
SMARCD3-215ENST00000496530 KIF21BO75037 1637 aa13.37□□□□□ -0.27
SMARCD3-215ENST00000496530 PTPRGP23470 1445 aa13.37□□□□□ -0.27
SMARCD3-215ENST00000496530 TTBK1Q5TCY1 1321 aaPredicted RBP13.36□□□□□ -0.27
SMARCD3-215ENST00000496530 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
SMARCD3-215ENST00000496530 DISP1Q96F81 1524 aa13.33□□□□□ -0.28
SMARCD3-215ENST00000496530 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
SMARCD3-215ENST00000496530 ADCY10Q96PN6 1610 aa13.29□□□□□ -0.28
SMARCD3-215ENST00000496530 UACAQ9BZF9 1416 aa13.28□□□□□ -0.28
SMARCD3-215ENST00000496530 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
SMARCD3-215ENST00000496530 ABCC2Q92887 1545 aa13.25□□□□□ -0.29
SMARCD3-215ENST00000496530 UHRF1BP1LA0JNW5 1464 aa13.25□□□□□ -0.29
SMARCD3-215ENST00000496530 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
SMARCD3-215ENST00000496530 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
SMARCD3-215ENST00000496530 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
SMARCD3-215ENST00000496530 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
SMARCD3-215ENST00000496530 P3H3Q8IVL6 736 aa13.22□□□□□ -0.29
SMARCD3-215ENST00000496530 PLB1Q6P1J6 1458 aa13.18□□□□□ -0.3
SMARCD3-215ENST00000496530 ABCA8O94911 1581 aa13.18□□□□□ -0.3
SMARCD3-215ENST00000496530 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
SMARCD3-215ENST00000496530 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SMARCD3-215ENST00000496530 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
SMARCD3-215ENST00000496530 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
SMARCD3-215ENST00000496530 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
SMARCD3-215ENST00000496530 RAPGEF6Q8TEU7 1601 aa13.16□□□□□ -0.3
SMARCD3-215ENST00000496530 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
SMARCD3-215ENST00000496530 ASXL2Q76L83 1435 aa13.15□□□□□ -0.3
SMARCD3-215ENST00000496530 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
SMARCD3-215ENST00000496530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
SMARCD3-215ENST00000496530 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
SMARCD3-215ENST00000496530 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
SMARCD3-215ENST00000496530 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
SMARCD3-215ENST00000496530 GLI2P10070 1586 aa13.09□□□□□ -0.31
SMARCD3-215ENST00000496530 FOXD1Q16676 465 aa13.09□□□□□ -0.31
SMARCD3-215ENST00000496530 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
SMARCD3-215ENST00000496530 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
SMARCD3-215ENST00000496530 TSPOAP1O95153 1857 aa13.07□□□□□ -0.32
SMARCD3-215ENST00000496530 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
SMARCD3-215ENST00000496530 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
SMARCD3-215ENST00000496530 ATP10BO94823 1461 aa13.06□□□□□ -0.32
SMARCD3-215ENST00000496530 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
SMARCD3-215ENST00000496530 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
SMARCD3-215ENST00000496530 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
SMARCD3-215ENST00000496530 CLIP1P30622 1438 aa13.05□□□□□ -0.32
SMARCD3-215ENST00000496530 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
SMARCD3-215ENST00000496530 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
SMARCD3-215ENST00000496530 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
SMARCD3-215ENST00000496530 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
SMARCD3-215ENST00000496530 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.32
SMARCD3-215ENST00000496530 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.33
SMARCD3-215ENST00000496530 KDM6BO15054 1643 aa13□□□□□ -0.33
SMARCD3-215ENST00000496530 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
SMARCD3-215ENST00000496530 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
SMARCD3-215ENST00000496530 CEP162Q5TB80 1403 aa12.96□□□□□ -0.33
SMARCD3-215ENST00000496530 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.34
SMARCD3-215ENST00000496530 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
SMARCD3-215ENST00000496530 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
SMARCD3-215ENST00000496530 PCF11O94913 1555 aaKnown RBP12.95□□□□□ -0.34
SMARCD3-215ENST00000496530 CDK13Q14004 1512 aaKnown RBP12.95□□□□□ -0.34
SMARCD3-215ENST00000496530 MAGI3Q5TCQ9 1506 aa12.95□□□□□ -0.34
SMARCD3-215ENST00000496530 FYCO1Q9BQS8 1478 aa12.95□□□□□ -0.34
SMARCD3-215ENST00000496530 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
SMARCD3-215ENST00000496530 KIF14Q15058 1648 aa12.91□□□□□ -0.34
SMARCD3-215ENST00000496530 CFAP74Q9C0B2 1584 aa12.9□□□□□ -0.34
SMARCD3-215ENST00000496530 LRRIQ1Q96JM4 1722 aa12.89□□□□□ -0.35
SMARCD3-215ENST00000496530 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
SMARCD3-215ENST00000496530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCD3-215ENST00000496530 NEO1Q92859 1461 aa12.87□□□□□ -0.35
SMARCD3-215ENST00000496530 MYO5CQ9NQX4 1742 aa12.86□□□□□ -0.35
SMARCD3-215ENST00000496530 TTC37Q6PGP7 1564 aa12.85□□□□□ -0.35
SMARCD3-215ENST00000496530 FANCAO15360 1455 aa12.84□□□□□ -0.35
SMARCD3-215ENST00000496530 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.35
SMARCD3-215ENST00000496530 MTUS2Q5JR59 1369 aa12.83□□□□□ -0.36
SMARCD3-215ENST00000496530 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
SMARCD3-215ENST00000496530 PLCH2O75038 1416 aa12.81□□□□□ -0.36
SMARCD3-215ENST00000496530 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
SMARCD3-215ENST00000496530 APLP2Q06481 763 aa12.81□□□□□ -0.36
SMARCD3-215ENST00000496530 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
SMARCD3-215ENST00000496530 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
SMARCD3-215ENST00000496530 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms