RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-223ENST00000496393 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
NVL-223ENST00000496393 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
NVL-223ENST00000496393 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
NVL-223ENST00000496393 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
NVL-223ENST00000496393 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
NVL-223ENST00000496393 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
NVL-223ENST00000496393 GRIN2AQ12879 1464 aa14.32□□□□□ -0.12
NVL-223ENST00000496393 ADAMTS12P58397 1594 aa14.31□□□□□ -0.12
NVL-223ENST00000496393 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
NVL-223ENST00000496393 NUP160Q12769 1436 aa14.26□□□□□ -0.13
NVL-223ENST00000496393 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
NVL-223ENST00000496393 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
NVL-223ENST00000496393 SUPT5HO00267 1087 aaKnown RBP14.23□□□□□ -0.13
NVL-223ENST00000496393 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
NVL-223ENST00000496393 FHAD1B1AJZ9 1412 aa14.21□□□□□ -0.13
NVL-223ENST00000496393 KIF13AQ9H1H9 1805 aa14.2□□□□□ -0.14
NVL-223ENST00000496393 TOP2BQ02880 1626 aa14.19□□□□□ -0.14
NVL-223ENST00000496393 PRG4Q92954 1404 aaPredicted RBP14.16□□□□□ -0.14
NVL-223ENST00000496393 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
NVL-223ENST00000496393 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
NVL-223ENST00000496393 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
NVL-223ENST00000496393 JPH4Q96JJ6 628 aa14.1□□□□□ -0.15
NVL-223ENST00000496393 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
NVL-223ENST00000496393 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
NVL-223ENST00000496393 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
NVL-223ENST00000496393 ADCY10Q96PN6 1610 aa14.06□□□□□ -0.16
NVL-223ENST00000496393 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
NVL-223ENST00000496393 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
NVL-223ENST00000496393 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
NVL-223ENST00000496393 TSPOAP1O95153 1857 aa14.01□□□□□ -0.17
NVL-223ENST00000496393 KDM6BO15054 1643 aa14.01□□□□□ -0.17
NVL-223ENST00000496393 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
NVL-223ENST00000496393 KDM4FA0A1W2PPD8 638 aa13.96□□□□□ -0.17
NVL-223ENST00000496393 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
NVL-223ENST00000496393 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
NVL-223ENST00000496393 CUL7Q14999 1698 aa13.93□□□□□ -0.18
NVL-223ENST00000496393 IGF1RP08069 1367 aa13.92□□□□□ -0.18
NVL-223ENST00000496393 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
NVL-223ENST00000496393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
NVL-223ENST00000496393 PTPRGP23470 1445 aa13.9□□□□□ -0.19
NVL-223ENST00000496393 PPRC1Q5VV67 1664 aaKnown RBP13.85□□□□□ -0.19
NVL-223ENST00000496393 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
NVL-223ENST00000496393 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
NVL-223ENST00000496393 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
NVL-223ENST00000496393 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
NVL-223ENST00000496393 CARMIL2Q6F5E8 1435 aa13.83□□□□□ -0.2
NVL-223ENST00000496393 IQGAP2Q13576 1575 aa13.83□□□□□ -0.2
NVL-223ENST00000496393 ADGRL1O94910 1474 aa13.82□□□□□ -0.2
NVL-223ENST00000496393 PLB1Q6P1J6 1458 aa13.81□□□□□ -0.2
NVL-223ENST00000496393 ILDR1Q86SU0 546 aaPredicted RBP13.81□□□□□ -0.2
NVL-223ENST00000496393 GLI2P10070 1586 aa13.8□□□□□ -0.2
NVL-223ENST00000496393 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
NVL-223ENST00000496393 COL17A1Q9UMD9 1497 aaPredicted RBP13.78□□□□□ -0.2
NVL-223ENST00000496393 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
NVL-223ENST00000496393 UHRF1BP1LA0JNW5 1464 aa13.77□□□□□ -0.21
NVL-223ENST00000496393 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
NVL-223ENST00000496393 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
NVL-223ENST00000496393 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
NVL-223ENST00000496393 KDM5BQ9UGL1 1544 aa13.73□□□□□ -0.21
NVL-223ENST00000496393 HECW2Q9P2P5 1572 aa13.72□□□□□ -0.21
NVL-223ENST00000496393 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
NVL-223ENST00000496393 TEX14Q8IWB6 1497 aa13.71□□□□□ -0.21
NVL-223ENST00000496393 UGGT2Q9NYU1 1516 aa13.7□□□□□ -0.22
NVL-223ENST00000496393 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
NVL-223ENST00000496393 WDR7Q9Y4E6 1490 aa13.67□□□□□ -0.22
NVL-223ENST00000496393 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
NVL-223ENST00000496393 CTTNBP2Q8WZ74 1663 aa13.63□□□□□ -0.23
NVL-223ENST00000496393 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
NVL-223ENST00000496393 CD109Q6YHK3 1445 aa13.61□□□□□ -0.23
NVL-223ENST00000496393 KIF21BO75037 1637 aa13.61□□□□□ -0.23
NVL-223ENST00000496393 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
NVL-223ENST00000496393 ABCA8O94911 1581 aa13.59□□□□□ -0.23
NVL-223ENST00000496393 MAGI3Q5TCQ9 1506 aa13.59□□□□□ -0.23
NVL-223ENST00000496393 ARID3CA6NKF2 412 aa13.58□□□□□ -0.24
NVL-223ENST00000496393 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
NVL-223ENST00000496393 KCNA4P22459 653 aa13.55□□□□□ -0.24
NVL-223ENST00000496393 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
NVL-223ENST00000496393 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
NVL-223ENST00000496393 ARAP3Q8WWN8 1544 aa13.48□□□□□ -0.25
NVL-223ENST00000496393 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
NVL-223ENST00000496393 CAPN15O75808 1086 aa13.47□□□□□ -0.25
NVL-223ENST00000496393 ATP10BO94823 1461 aa13.47□□□□□ -0.25
NVL-223ENST00000496393 PTPRMP28827 1452 aa13.46□□□□□ -0.25
NVL-223ENST00000496393 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.26
NVL-223ENST00000496393 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
NVL-223ENST00000496393 DSG3P32926 999 aa13.45□□□□□ -0.26
NVL-223ENST00000496393 RAPGEF3O95398 923 aa13.44□□□□□ -0.26
NVL-223ENST00000496393 MADDQ8WXG6 1647 aa13.42□□□□□ -0.26
NVL-223ENST00000496393 FRMPD1Q5SYB0 1578 aa13.42□□□□□ -0.26
NVL-223ENST00000496393 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
NVL-223ENST00000496393 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
NVL-223ENST00000496393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
NVL-223ENST00000496393 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
NVL-223ENST00000496393 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
NVL-223ENST00000496393 BCORL1Q5H9F3 1711 aa13.41□□□□□ -0.26
NVL-223ENST00000496393 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
NVL-223ENST00000496393 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
NVL-223ENST00000496393 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
NVL-223ENST00000496393 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
NVL-223ENST00000496393 NEO1Q92859 1461 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms