RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IGF1RP08069 1367 aa25.06■■□□□ 1.6
CXCL12-208ENST00000496375 CUL7Q14999 1698 aa25.03■■□□□ 1.6
CXCL12-208ENST00000496375 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
CXCL12-208ENST00000496375 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
CXCL12-208ENST00000496375 KIF13AQ9H1H9 1805 aa24.86■■□□□ 1.57
CXCL12-208ENST00000496375 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.57
CXCL12-208ENST00000496375 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
CXCL12-208ENST00000496375 MAPKBP1O60336 1514 aa24.77■■□□□ 1.56
CXCL12-208ENST00000496375 ABCC10Q5T3U5 1492 aa24.75■■□□□ 1.55
CXCL12-208ENST00000496375 IQGAP2Q13576 1575 aa24.75■■□□□ 1.55
CXCL12-208ENST00000496375 FAM69CQ0P6D2 419 aa24.74■■□□□ 1.55
CXCL12-208ENST00000496375 PTPRGP23470 1445 aa24.73■■□□□ 1.55
CXCL12-208ENST00000496375 CARMIL2Q6F5E8 1435 aa24.72■■□□□ 1.55
CXCL12-208ENST00000496375 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
CXCL12-208ENST00000496375 DIP2BQ9P265 1576 aa24.7■■□□□ 1.54
CXCL12-208ENST00000496375 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
CXCL12-208ENST00000496375 RAPGEF2Q9Y4G8 1499 aa24.69■■□□□ 1.54
CXCL12-208ENST00000496375 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
CXCL12-208ENST00000496375 DISP1Q96F81 1524 aa24.62■■□□□ 1.53
CXCL12-208ENST00000496375 ABCC2Q92887 1545 aa24.59■■□□□ 1.53
CXCL12-208ENST00000496375 UGGT2Q9NYU1 1516 aa24.58■■□□□ 1.53
CXCL12-208ENST00000496375 UHRF1BP1LA0JNW5 1464 aa24.55■■□□□ 1.52
CXCL12-208ENST00000496375 TSPOAP1O95153 1857 aa24.55■■□□□ 1.52
CXCL12-208ENST00000496375 UACAQ9BZF9 1416 aa24.54■■□□□ 1.52
CXCL12-208ENST00000496375 KIAA0556O60303 1618 aa24.53■■□□□ 1.52
CXCL12-208ENST00000496375 ASXL2Q76L83 1435 aa24.51■■□□□ 1.51
CXCL12-208ENST00000496375 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
CXCL12-208ENST00000496375 PLB1Q6P1J6 1458 aa24.49■■□□□ 1.51
CXCL12-208ENST00000496375 KDM6BO15054 1643 aa24.47■■□□□ 1.51
CXCL12-208ENST00000496375 PRXQ9BXM0 1461 aa24.45■■□□□ 1.5
CXCL12-208ENST00000496375 KDM5BQ9UGL1 1544 aa24.44■■□□□ 1.5
CXCL12-208ENST00000496375 GLI2P10070 1586 aa24.42■■□□□ 1.5
CXCL12-208ENST00000496375 ZCCHC11Q5TAX3 1644 aaKnown RBP24.41■■□□□ 1.5
CXCL12-208ENST00000496375 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
CXCL12-208ENST00000496375 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
CXCL12-208ENST00000496375 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
CXCL12-208ENST00000496375 MAP3K4Q9Y6R4 1608 aa24.3■■□□□ 1.48
CXCL12-208ENST00000496375 ABCA8O94911 1581 aa24.29■■□□□ 1.48
CXCL12-208ENST00000496375 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
CXCL12-208ENST00000496375 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
CXCL12-208ENST00000496375 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
CXCL12-208ENST00000496375 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
CXCL12-208ENST00000496375 P3H3Q8IVL6 736 aa24.2■■□□□ 1.46
CXCL12-208ENST00000496375 COL17A1Q9UMD9 1497 aaPredicted RBP24.19■■□□□ 1.46
CXCL12-208ENST00000496375 EEA1Q15075 1411 aa24.18■■□□□ 1.46
CXCL12-208ENST00000496375 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
CXCL12-208ENST00000496375 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
CXCL12-208ENST00000496375 SAMD9Q5K651 1589 aa24.14■■□□□ 1.45
CXCL12-208ENST00000496375 CFAP43Q8NDM7 1665 aa24.14■■□□□ 1.45
CXCL12-208ENST00000496375 CD109Q6YHK3 1445 aa24.12■■□□□ 1.45
CXCL12-208ENST00000496375 ARID3CA6NKF2 412 aa24.12■■□□□ 1.45
CXCL12-208ENST00000496375 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
CXCL12-208ENST00000496375 ATP10BO94823 1461 aa24.08■■□□□ 1.45
CXCL12-208ENST00000496375 RANGAP1P46060 587 aaPredicted RBP24.05■■□□□ 1.44
CXCL12-208ENST00000496375 RAPGEF6Q8TEU7 1601 aa24.05■■□□□ 1.44
CXCL12-208ENST00000496375 ADGRL1O94910 1474 aa24.03■■□□□ 1.44
CXCL12-208ENST00000496375 FHOD3Q2V2M9 1422 aa24■■□□□ 1.43
CXCL12-208ENST00000496375 KIF21BO75037 1637 aa23.99■■□□□ 1.43
CXCL12-208ENST00000496375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.96■■□□□ 1.43
CXCL12-208ENST00000496375 HNRNPUL2Q1KMD3 747 aaKnown RBP23.96■■□□□ 1.43
CXCL12-208ENST00000496375 ABCA9Q8IUA7 1624 aa23.95■■□□□ 1.43
CXCL12-208ENST00000496375 NUP153P49790 1475 aaKnown RBP23.95■■□□□ 1.42
CXCL12-208ENST00000496375 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
CXCL12-208ENST00000496375 EFCAB5A4FU69 1503 aa23.91■■□□□ 1.42
CXCL12-208ENST00000496375 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
CXCL12-208ENST00000496375 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
CXCL12-208ENST00000496375 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
CXCL12-208ENST00000496375 NEO1Q92859 1461 aa23.82■■□□□ 1.4
CXCL12-208ENST00000496375 PLEKHD1A6NEE1 506 aa23.82■■□□□ 1.4
CXCL12-208ENST00000496375 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
CXCL12-208ENST00000496375 RAPGEF3O95398 923 aa23.78■■□□□ 1.4
CXCL12-208ENST00000496375 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
CXCL12-208ENST00000496375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.73■■□□□ 1.39
CXCL12-208ENST00000496375 FRMPD1Q5SYB0 1578 aa23.73■■□□□ 1.39
CXCL12-208ENST00000496375 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
CXCL12-208ENST00000496375 TTC37Q6PGP7 1564 aa23.7■■□□□ 1.38
CXCL12-208ENST00000496375 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
CXCL12-208ENST00000496375 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
CXCL12-208ENST00000496375 FANCAO15360 1455 aa23.68■■□□□ 1.38
CXCL12-208ENST00000496375 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
CXCL12-208ENST00000496375 HECW1Q76N89 1606 aa23.67■■□□□ 1.38
CXCL12-208ENST00000496375 CFAP74Q9C0B2 1584 aa23.67■■□□□ 1.38
CXCL12-208ENST00000496375 ATP1B4Q9UN42 357 aaPredicted RBP23.67■■□□□ 1.38
CXCL12-208ENST00000496375 DENND4BO75064 1496 aaPredicted RBP23.66■■□□□ 1.38
CXCL12-208ENST00000496375 RICTORQ6R327 1708 aa23.64■■□□□ 1.38
CXCL12-208ENST00000496375 ADAMTSL3P82987 1691 aa23.61■■□□□ 1.37
CXCL12-208ENST00000496375 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
CXCL12-208ENST00000496375 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
CXCL12-208ENST00000496375 BCORL1Q5H9F3 1711 aa23.58■■□□□ 1.37
CXCL12-208ENST00000496375 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
CXCL12-208ENST00000496375 PLCH2O75038 1416 aa23.57■■□□□ 1.36
CXCL12-208ENST00000496375 PTPRMP28827 1452 aa23.56■■□□□ 1.36
CXCL12-208ENST00000496375 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
CXCL12-208ENST00000496375 MADDQ8WXG6 1647 aa23.53■■□□□ 1.36
CXCL12-208ENST00000496375 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
CXCL12-208ENST00000496375 KIF14Q15058 1648 aa23.52■■□□□ 1.36
CXCL12-208ENST00000496375 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
CXCL12-208ENST00000496375 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
CXCL12-208ENST00000496375 SCAPERQ9BY12 1400 aa23.51■■□□□ 1.35
CXCL12-208ENST00000496375 ZFYVE16Q7Z3T8 1539 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms