RNA–Protein interactions for RNA: ENST00000496281.1

RTEL1-TNFRSF6B-204, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

TSL 2

Gene RTEL1-TNFRSF6B, Length 5,314 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-204ENST00000496281 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.15■■□□□ 1.46
RTEL1-TNFRSF6B-204ENST00000496281 DDRGK1Q96HY6 314 aa24.12■■□□□ 1.45
RTEL1-TNFRSF6B-204ENST00000496281 HSP90AA1P07900 732 aaKnown RBP24.11■■□□□ 1.45
RTEL1-TNFRSF6B-204ENST00000496281 NPM1P06748 294 aaKnown RBP eCLIP24.09■■□□□ 1.45
RTEL1-TNFRSF6B-204ENST00000496281 IRX6P78412 446 aaPredicted RBP24.08■■□□□ 1.44
RTEL1-TNFRSF6B-204ENST00000496281 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
RTEL1-TNFRSF6B-204ENST00000496281 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
RTEL1-TNFRSF6B-204ENST00000496281 WDR43Q15061 677 aaKnown RBP eCLIP24.05■■□□□ 1.44
RTEL1-TNFRSF6B-204ENST00000496281 PPP4R2Q9NY27 417 aa24.02■■□□□ 1.44
RTEL1-TNFRSF6B-204ENST00000496281 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
RTEL1-TNFRSF6B-204ENST00000496281 PPM1GO15355 546 aaPredicted RBP23.99■■□□□ 1.43
RTEL1-TNFRSF6B-204ENST00000496281 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
RTEL1-TNFRSF6B-204ENST00000496281 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
RTEL1-TNFRSF6B-204ENST00000496281 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
RTEL1-TNFRSF6B-204ENST00000496281 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
RTEL1-TNFRSF6B-204ENST00000496281 TIMELESSQ9UNS1 1208 aa23.91■■□□□ 1.42
RTEL1-TNFRSF6B-204ENST00000496281 NOP58Q9Y2X3 529 aaKnown RBP23.9■■□□□ 1.42
RTEL1-TNFRSF6B-204ENST00000496281 CCER2I3L3R5 266 aa23.89■■□□□ 1.41
RTEL1-TNFRSF6B-204ENST00000496281 BECN1Q14457 450 aa23.88■■□□□ 1.41
RTEL1-TNFRSF6B-204ENST00000496281 ERICH6BQ5W0A0 696 aa23.84■■□□□ 1.41
RTEL1-TNFRSF6B-204ENST00000496281 RBM19Q9Y4C8 960 aaKnown RBP23.82■■□□□ 1.4
RTEL1-TNFRSF6B-204ENST00000496281 RGL3Q3MIN7 710 aa23.82■■□□□ 1.4
RTEL1-TNFRSF6B-204ENST00000496281 PLEKHD1A6NEE1 506 aa23.81■■□□□ 1.4
RTEL1-TNFRSF6B-204ENST00000496281 KCNH8Q96L42 1107 aa23.79■■□□□ 1.4
RTEL1-TNFRSF6B-204ENST00000496281 SENP3-EIF4A1A0A087X0R7 540 aa23.78■■□□□ 1.4
RTEL1-TNFRSF6B-204ENST00000496281 ARXQ96QS3 562 aa23.76■■□□□ 1.39
RTEL1-TNFRSF6B-204ENST00000496281 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
RTEL1-TNFRSF6B-204ENST00000496281 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
RTEL1-TNFRSF6B-204ENST00000496281 CFDP1Q9UEE9 299 aaPredicted RBP23.73■■□□□ 1.39
RTEL1-TNFRSF6B-204ENST00000496281 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
RTEL1-TNFRSF6B-204ENST00000496281 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 TRIM44Q96DX7 344 aaPredicted RBP23.69■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 DEKP35659 375 aaKnown RBP23.68■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 MYH16Q9H6N6 1097 aa23.66■■□□□ 1.38
RTEL1-TNFRSF6B-204ENST00000496281 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
RTEL1-TNFRSF6B-204ENST00000496281 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
RTEL1-TNFRSF6B-204ENST00000496281 GOLGA6L22H0YM25 854 aa23.6■■□□□ 1.37
RTEL1-TNFRSF6B-204ENST00000496281 CDCA8Q53HL2 280 aa23.58■■□□□ 1.37
RTEL1-TNFRSF6B-204ENST00000496281 B4GALNT3Q6L9W6 998 aa23.57■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 NACADO15069 1562 aa23.57■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 PPP1R15AO75807 674 aaPredicted RBP23.56■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 LAS1LQ9Y4W2 734 aaKnown RBP23.55■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 CFAP53Q96M91 514 aa23.54■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 CECR2Q9BXF3 1484 aa23.52■■□□□ 1.36
RTEL1-TNFRSF6B-204ENST00000496281 SETD5Q9C0A6 1442 aa23.51■■□□□ 1.35
RTEL1-TNFRSF6B-204ENST00000496281 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
RTEL1-TNFRSF6B-204ENST00000496281 SOGA1O94964 1423 aa23.49■■□□□ 1.35
RTEL1-TNFRSF6B-204ENST00000496281 NEUROD2Q15784 382 aa23.48■■□□□ 1.35
RTEL1-TNFRSF6B-204ENST00000496281 PLEKHG5O94827 1062 aa23.47■■□□□ 1.35
RTEL1-TNFRSF6B-204ENST00000496281 C14orf37Q86TY3 774 aa23.46■■□□□ 1.35
RTEL1-TNFRSF6B-204ENST00000496281 RTN4Q9NQC3 1192 aaKnown RBP23.45■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 ZBTB7CA1YPR0 619 aa23.44■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 L1TD1Q5T7N2 865 aaKnown RBP23.42■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 NAP1L5Q96NT1 182 aaPredicted RBP23.41■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 NCLP19338 710 aaKnown RBP23.4■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 FTSJ3Q8IY81 847 aaKnown RBP23.4■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
RTEL1-TNFRSF6B-204ENST00000496281 CC2D1BQ5T0F9 858 aaKnown RBP23.38■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 RGS3P49796 1198 aa23.37■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 TCERG1O14776 1098 aaKnown RBP23.36■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 A0A0G2JS52 829 aa23.34■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 FRAT1Q92837 279 aaPredicted RBP23.34■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 MAPK8IP3Q9UPT6 1336 aa23.34■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 CUX2O14529 1486 aa23.33■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
RTEL1-TNFRSF6B-204ENST00000496281 IPO9Q96P70 1041 aaKnown RBP23.31■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 RAB3GAP2Q9H2M9 1393 aa23.29■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 MS4A1P11836 297 aa23.29■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 POGKQ9P215 609 aa23.29■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 TMF1P82094 1093 aa23.27■■□□□ 1.32
RTEL1-TNFRSF6B-204ENST00000496281 PTMAP06454 111 aaKnown RBP23.25■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 USP35Q9P2H5 1018 aa23.24■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 CASC1Q6TDU7 716 aa23.23■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 U2SURPO15042 1029 aaKnown RBP23.23■■□□□ 1.31
RTEL1-TNFRSF6B-204ENST00000496281 FOXD1Q16676 465 aa23.18■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 DHX57Q6P158 1386 aaKnown RBP23.18■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 DNTTIP2Q5QJE6 756 aaKnown RBP23.17■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 PKD2Q13563 968 aa23.16■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 RCAN3Q9UKA8 241 aa23.15■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 RALBP1Q15311 655 aa23.14■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 HSCBQ8IWL3 235 aa23.14■■□□□ 1.3
RTEL1-TNFRSF6B-204ENST00000496281 PTMSP20962 102 aa23.14■■□□□ 1.29
RTEL1-TNFRSF6B-204ENST00000496281 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
RTEL1-TNFRSF6B-204ENST00000496281 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms