RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 JPH4Q96JJ6 628 aa29.4■■■□□ 2.3
APOBEC3A-204ENST00000495988 CUL7Q14999 1698 aa29.4■■■□□ 2.3
APOBEC3A-204ENST00000495988 KIAA0586Q9BVV6 1533 aa29.28■■■□□ 2.28
APOBEC3A-204ENST00000495988 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.27
APOBEC3A-204ENST00000495988 NPM1P06748 294 aaKnown RBP eCLIP29.06■■■□□ 2.24
APOBEC3A-204ENST00000495988 ADCY10Q96PN6 1610 aa29.05■■■□□ 2.24
APOBEC3A-204ENST00000495988 IQGAP2Q13576 1575 aa29.04■■■□□ 2.24
APOBEC3A-204ENST00000495988 KIF13AQ9H1H9 1805 aa29.02■■■□□ 2.24
APOBEC3A-204ENST00000495988 RAPGEF2Q9Y4G8 1499 aa29.02■■■□□ 2.24
APOBEC3A-204ENST00000495988 CARMIL2Q6F5E8 1435 aa29■■■□□ 2.23
APOBEC3A-204ENST00000495988 PTPRGP23470 1445 aa28.98■■■□□ 2.23
APOBEC3A-204ENST00000495988 MAPKBP1O60336 1514 aa28.97■■■□□ 2.23
APOBEC3A-204ENST00000495988 TTBK1Q5TCY1 1321 aaPredicted RBP28.96■■■□□ 2.23
APOBEC3A-204ENST00000495988 TNIKQ9UKE5 1360 aa28.95■■■□□ 2.22
APOBEC3A-204ENST00000495988 ABCC10Q5T3U5 1492 aa28.92■■■□□ 2.22
APOBEC3A-204ENST00000495988 FAM69CQ0P6D2 419 aa28.9■■■□□ 2.22
APOBEC3A-204ENST00000495988 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
APOBEC3A-204ENST00000495988 DIP2BQ9P265 1576 aa28.87■■■□□ 2.21
APOBEC3A-204ENST00000495988 UGGT2Q9NYU1 1516 aa28.84■■■□□ 2.21
APOBEC3A-204ENST00000495988 ABCC2Q92887 1545 aa28.8■■■□□ 2.2
APOBEC3A-204ENST00000495988 CTTNBP2Q8WZ74 1663 aa28.8■■■□□ 2.2
APOBEC3A-204ENST00000495988 KIAA0556O60303 1618 aa28.78■■■□□ 2.2
APOBEC3A-204ENST00000495988 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
APOBEC3A-204ENST00000495988 UHRF1BP1LA0JNW5 1464 aa28.76■■■□□ 2.19
APOBEC3A-204ENST00000495988 PRXQ9BXM0 1461 aa28.75■■■□□ 2.19
APOBEC3A-204ENST00000495988 ASXL2Q76L83 1435 aa28.69■■■□□ 2.18
APOBEC3A-204ENST00000495988 TSPOAP1O95153 1857 aa28.67■■■□□ 2.18
APOBEC3A-204ENST00000495988 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
APOBEC3A-204ENST00000495988 GOLGA3Q08378 1498 aa28.65■■■□□ 2.18
APOBEC3A-204ENST00000495988 KDM5BQ9UGL1 1544 aa28.64■■■□□ 2.17
APOBEC3A-204ENST00000495988 AEBP2Q6ZN18 517 aaPredicted RBP28.63■■■□□ 2.17
APOBEC3A-204ENST00000495988 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
APOBEC3A-204ENST00000495988 KDM6BO15054 1643 aa28.58■■■□□ 2.17
APOBEC3A-204ENST00000495988 ZCCHC11Q5TAX3 1644 aaKnown RBP28.58■■■□□ 2.17
APOBEC3A-204ENST00000495988 GLI2P10070 1586 aa28.58■■■□□ 2.17
APOBEC3A-204ENST00000495988 EEA1Q15075 1411 aa28.51■■■□□ 2.15
APOBEC3A-204ENST00000495988 EPRSP07814 1512 aaKnown RBP28.5■■■□□ 2.15
APOBEC3A-204ENST00000495988 ABCA8O94911 1581 aa28.49■■■□□ 2.15
APOBEC3A-204ENST00000495988 PPRC1Q5VV67 1664 aaKnown RBP28.48■■■□□ 2.15
APOBEC3A-204ENST00000495988 WDR7Q9Y4E6 1490 aa28.44■■■□□ 2.14
APOBEC3A-204ENST00000495988 MAP3K4Q9Y6R4 1608 aa28.43■■■□□ 2.14
APOBEC3A-204ENST00000495988 P3H3Q8IVL6 736 aa28.42■■■□□ 2.14
APOBEC3A-204ENST00000495988 FAM9AQ8IZU1 332 aaPredicted RBP28.41■■■□□ 2.14
APOBEC3A-204ENST00000495988 SAMD9Q5K651 1589 aa28.37■■■□□ 2.13
APOBEC3A-204ENST00000495988 TEX14Q8IWB6 1497 aa28.35■■■□□ 2.13
APOBEC3A-204ENST00000495988 KCNH8Q96L42 1107 aa28.3■■■□□ 2.12
APOBEC3A-204ENST00000495988 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
APOBEC3A-204ENST00000495988 RANGAP1P46060 587 aaPredicted RBP28.28■■■□□ 2.12
APOBEC3A-204ENST00000495988 KIF21BO75037 1637 aa28.27■■■□□ 2.12
APOBEC3A-204ENST00000495988 COL17A1Q9UMD9 1497 aaPredicted RBP28.27■■■□□ 2.12
APOBEC3A-204ENST00000495988 CFAP43Q8NDM7 1665 aa28.26■■■□□ 2.12
APOBEC3A-204ENST00000495988 ATP10BO94823 1461 aa28.25■■■□□ 2.11
APOBEC3A-204ENST00000495988 CD109Q6YHK3 1445 aa28.25■■■□□ 2.11
APOBEC3A-204ENST00000495988 RAPGEF6Q8TEU7 1601 aa28.24■■■□□ 2.11
APOBEC3A-204ENST00000495988 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
APOBEC3A-204ENST00000495988 MAGI3Q5TCQ9 1506 aa28.2■■■□□ 2.1
APOBEC3A-204ENST00000495988 FHOD3Q2V2M9 1422 aa28.19■■■□□ 2.1
APOBEC3A-204ENST00000495988 KDM4FA0A1W2PPD8 638 aa28.18■■■□□ 2.1
APOBEC3A-204ENST00000495988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.1
APOBEC3A-204ENST00000495988 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
APOBEC3A-204ENST00000495988 EFCAB5A4FU69 1503 aa28.13■■■□□ 2.09
APOBEC3A-204ENST00000495988 NUP153P49790 1475 aaKnown RBP28.12■■■□□ 2.09
APOBEC3A-204ENST00000495988 EHMT2Q96KQ7 1210 aa28.1■■■□□ 2.09
APOBEC3A-204ENST00000495988 ABCA9Q8IUA7 1624 aa28.07■■■□□ 2.08
APOBEC3A-204ENST00000495988 UBTFP17480 764 aaKnown RBP28.07■■■□□ 2.08
APOBEC3A-204ENST00000495988 ADGRL1O94910 1474 aa28.02■■■□□ 2.08
APOBEC3A-204ENST00000495988 ARAP3Q8WWN8 1544 aa27.98■■■□□ 2.07
APOBEC3A-204ENST00000495988 PLEKHD1A6NEE1 506 aa27.96■■■□□ 2.07
APOBEC3A-204ENST00000495988 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
APOBEC3A-204ENST00000495988 NEO1Q92859 1461 aa27.91■■■□□ 2.06
APOBEC3A-204ENST00000495988 ARHGAP35Q9NRY4 1499 aa27.9■■■□□ 2.06
APOBEC3A-204ENST00000495988 FMN1Q68DA7 1419 aa27.88■■■□□ 2.05
APOBEC3A-204ENST00000495988 CDK13Q14004 1512 aaKnown RBP27.87■■■□□ 2.05
APOBEC3A-204ENST00000495988 ATP1B4Q9UN42 357 aaPredicted RBP27.85■■■□□ 2.05
APOBEC3A-204ENST00000495988 HECW1Q76N89 1606 aa27.84■■■□□ 2.05
APOBEC3A-204ENST00000495988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.83■■■□□ 2.05
APOBEC3A-204ENST00000495988 RAPGEF3O95398 923 aa27.83■■■□□ 2.05
APOBEC3A-204ENST00000495988 TTC37Q6PGP7 1564 aa27.8■■■□□ 2.04
APOBEC3A-204ENST00000495988 FRMPD1Q5SYB0 1578 aa27.77■■■□□ 2.04
APOBEC3A-204ENST00000495988 FANCAO15360 1455 aa27.76■■■□□ 2.04
APOBEC3A-204ENST00000495988 CFAP74Q9C0B2 1584 aa27.76■■■□□ 2.03
APOBEC3A-204ENST00000495988 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
APOBEC3A-204ENST00000495988 DENND4BO75064 1496 aaPredicted RBP27.72■■■□□ 2.03
APOBEC3A-204ENST00000495988 CDK11AQ9UQ88 783 aaPredicted RBP27.71■■■□□ 2.03
APOBEC3A-204ENST00000495988 RICTORQ6R327 1708 aa27.68■■■□□ 2.02
APOBEC3A-204ENST00000495988 PLCH2O75038 1416 aa27.66■■■□□ 2.02
APOBEC3A-204ENST00000495988 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
APOBEC3A-204ENST00000495988 KIF14Q15058 1648 aa27.63■■■□□ 2.01
APOBEC3A-204ENST00000495988 TROQ12816 1431 aaPredicted RBP27.62■■■□□ 2.01
APOBEC3A-204ENST00000495988 ARHGEF40Q8TER5 1519 aa27.62■■■□□ 2.01
APOBEC3A-204ENST00000495988 MYO5CQ9NQX4 1742 aa27.61■■■□□ 2.01
APOBEC3A-204ENST00000495988 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
APOBEC3A-204ENST00000495988 ARID4BQ4LE39 1312 aaPredicted RBP27.6■■■□□ 2.01
APOBEC3A-204ENST00000495988 CLIP1P30622 1438 aa27.59■■■□□ 2.01
APOBEC3A-204ENST00000495988 CASKIN1Q8WXD9 1431 aa27.59■■■□□ 2.01
APOBEC3A-204ENST00000495988 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
APOBEC3A-204ENST00000495988 ZMYM4Q5VZL5 1548 aa27.58■■■□□ 2.01
APOBEC3A-204ENST00000495988 SCAPERQ9BY12 1400 aa27.58■■■□□ 2
APOBEC3A-204ENST00000495988 HECW2Q9P2P5 1572 aa27.57■■■□□ 2
APOBEC3A-204ENST00000495988 CCDC18Q5T9S5 1454 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms