RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, human

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK2-208	ENST00000495888	IGF1R	P08069	1367 aa		34.13	■■■■□ 3.05
SPOCK2-208	ENST00000495888	ERCC6L2	Q5T890	1561 aa		34.13	■■■■□ 3.05
SPOCK2-208	ENST00000495888	SHROOM2	Q13796	1616 aa		34.09	■■■■□ 3.05
SPOCK2-208	ENST00000495888	PRX	Q9BXM0	1461 aa		33.99	■■■■□ 3.03
SPOCK2-208	ENST00000495888	CUL7	Q14999	1698 aa		33.96	■■■■□ 3.03
SPOCK2-208	ENST00000495888	CARMIL1	Q5VZK9	1371 aa		33.94	■■■■□ 3.02
SPOCK2-208	ENST00000495888	KIF21B	O75037	1637 aa		33.93	■■■■□ 3.02
SPOCK2-208	ENST00000495888	RAPGEF2	Q9Y4G8	1499 aa		33.83	■■■■□ 3.01
SPOCK2-208	ENST00000495888	PRG4	Q92954	1404 aa	Predicted RBP	33.8	■■■■□ 3
SPOCK2-208	ENST00000495888	GOLGA3	Q08378	1498 aa		33.8	■■■■□ 3
SPOCK2-208	ENST00000495888	JPH4	Q96JJ6	628 aa		33.74	■■■□□ 2.99
SPOCK2-208	ENST00000495888	LOC105371045	A0A1W2PR82	267 aa		33.7	■■■□□ 2.99
SPOCK2-208	ENST00000495888	KIAA0586	Q9BVV6	1533 aa		33.6	■■■□□ 2.97
SPOCK2-208	ENST00000495888	KIF13A	Q9H1H9	1805 aa		33.59	■■■□□ 2.97
SPOCK2-208	ENST00000495888	TNIK	Q9UKE5	1360 aa		33.58	■■■□□ 2.97
SPOCK2-208	ENST00000495888	EHMT2	Q96KQ7	1210 aa		33.57	■■■□□ 2.96
SPOCK2-208	ENST00000495888	UBTF	P17480	764 aa	Known RBP	33.56	■■■□□ 2.96
SPOCK2-208	ENST00000495888	ADCY10	Q96PN6	1610 aa		33.49	■■■□□ 2.95
SPOCK2-208	ENST00000495888	MAPKBP1	O60336	1514 aa		33.48	■■■□□ 2.95
SPOCK2-208	ENST00000495888	ABCC10	Q5T3U5	1492 aa		33.43	■■■□□ 2.94
SPOCK2-208	ENST00000495888	CTTNBP2	Q8WZ74	1663 aa		33.4	■■■□□ 2.94
SPOCK2-208	ENST00000495888	DIP2B	Q9P265	1576 aa		33.38	■■■□□ 2.93
SPOCK2-208	ENST00000495888	NPM1	P06748	294 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
SPOCK2-208	ENST00000495888	IQGAP2	Q13576	1575 aa		33.31	■■■□□ 2.92
SPOCK2-208	ENST00000495888	FAM69C	Q0P6D2	419 aa		33.29	■■■□□ 2.92
SPOCK2-208	ENST00000495888	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.29	■■■□□ 2.92
SPOCK2-208	ENST00000495888	CEP162	Q5TB80	1403 aa		33.28	■■■□□ 2.92
SPOCK2-208	ENST00000495888	PTPRG	P23470	1445 aa		33.25	■■■□□ 2.91
SPOCK2-208	ENST00000495888	CARMIL2	Q6F5E8	1435 aa		33.22	■■■□□ 2.91
SPOCK2-208	ENST00000495888	CLIP1	P30622	1438 aa		33.2	■■■□□ 2.91
SPOCK2-208	ENST00000495888	UGGT2	Q9NYU1	1516 aa		33.2	■■■□□ 2.91
SPOCK2-208	ENST00000495888	EFCAB5	A4FU69	1503 aa		33.14	■■■□□ 2.9
SPOCK2-208	ENST00000495888	ABCC2	Q92887	1545 aa		33.14	■■■□□ 2.9
SPOCK2-208	ENST00000495888	DISP1	Q96F81	1524 aa		33.14	■■■□□ 2.9
SPOCK2-208	ENST00000495888	ARHGAP35	Q9NRY4	1499 aa		33.11	■■■□□ 2.89
SPOCK2-208	ENST00000495888	UHRF1BP1L	A0JNW5	1464 aa		33.1	■■■□□ 2.89
SPOCK2-208	ENST00000495888	SAMD9	Q5K651	1589 aa		33.09	■■■□□ 2.89
SPOCK2-208	ENST00000495888	RANGAP1	P46060	587 aa	Predicted RBP	33.06	■■■□□ 2.88
SPOCK2-208	ENST00000495888	KDM6B	O15054	1643 aa		33.06	■■■□□ 2.88
SPOCK2-208	ENST00000495888	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.04	■■■□□ 2.88
SPOCK2-208	ENST00000495888	UACA	Q9BZF9	1416 aa		33.02	■■■□□ 2.88
SPOCK2-208	ENST00000495888	TSPOAP1	O95153	1857 aa		33.01	■■■□□ 2.88
SPOCK2-208	ENST00000495888	ASXL2	Q76L83	1435 aa		33.01	■■■□□ 2.87
SPOCK2-208	ENST00000495888	PLB1	Q6P1J6	1458 aa		33	■■■□□ 2.87
SPOCK2-208	ENST00000495888	KIAA0556	O60303	1618 aa		32.99	■■■□□ 2.87
SPOCK2-208	ENST00000495888	GLI2	P10070	1586 aa		32.99	■■■□□ 2.87
SPOCK2-208	ENST00000495888	KDM5B	Q9UGL1	1544 aa		32.95	■■■□□ 2.87
SPOCK2-208	ENST00000495888	PPRC1	Q5VV67	1664 aa	Known RBP	32.93	■■■□□ 2.86
SPOCK2-208	ENST00000495888	FHOD3	Q2V2M9	1422 aa		32.91	■■■□□ 2.86
SPOCK2-208	ENST00000495888	P3H3	Q8IVL6	736 aa		32.87	■■■□□ 2.85
SPOCK2-208	ENST00000495888	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.87	■■■□□ 2.85
SPOCK2-208	ENST00000495888	VPS8	Q8N3P4	1428 aa		32.85	■■■□□ 2.85
SPOCK2-208	ENST00000495888	EPRS	P07814	1512 aa	Known RBP	32.84	■■■□□ 2.85
SPOCK2-208	ENST00000495888	FMN1	Q68DA7	1419 aa		32.81	■■■□□ 2.84
SPOCK2-208	ENST00000495888	MAP3K4	Q9Y6R4	1608 aa		32.8	■■■□□ 2.84
SPOCK2-208	ENST00000495888	ABCA8	O94911	1581 aa		32.71	■■■□□ 2.83
SPOCK2-208	ENST00000495888	KDM4F	A0A1W2PPD8	638 aa		32.71	■■■□□ 2.83
SPOCK2-208	ENST00000495888	WDR7	Q9Y4E6	1490 aa		32.7	■■■□□ 2.83
SPOCK2-208	ENST00000495888	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.67	■■■□□ 2.82
SPOCK2-208	ENST00000495888	CASKIN1	Q8WXD9	1431 aa		32.67	■■■□□ 2.82
SPOCK2-208	ENST00000495888	TEX14	Q8IWB6	1497 aa		32.67	■■■□□ 2.82
SPOCK2-208	ENST00000495888	FYCO1	Q9BQS8	1478 aa		32.64	■■■□□ 2.82
SPOCK2-208	ENST00000495888	PCF11	O94913	1555 aa	Known RBP	32.62	■■■□□ 2.81
SPOCK2-208	ENST00000495888	RAPGEF6	Q8TEU7	1601 aa		32.55	■■■□□ 2.8
SPOCK2-208	ENST00000495888	CFAP43	Q8NDM7	1665 aa		32.54	■■■□□ 2.8
SPOCK2-208	ENST00000495888	HECW1	Q76N89	1606 aa		32.51	■■■□□ 2.8
SPOCK2-208	ENST00000495888	MAGI3	Q5TCQ9	1506 aa		32.51	■■■□□ 2.79
SPOCK2-208	ENST00000495888	MAP3K1	Q13233	1512 aa		32.48	■■■□□ 2.79
SPOCK2-208	ENST00000495888	ADGRL1	O94910	1474 aa		32.48	■■■□□ 2.79
SPOCK2-208	ENST00000495888	NUP153	P49790	1475 aa	Known RBP	32.48	■■■□□ 2.79
SPOCK2-208	ENST00000495888	CD109	Q6YHK3	1445 aa		32.46	■■■□□ 2.79
SPOCK2-208	ENST00000495888	CCDC18	Q5T9S5	1454 aa		32.42	■■■□□ 2.78
SPOCK2-208	ENST00000495888	APLP2	Q06481	763 aa		32.4	■■■□□ 2.78
SPOCK2-208	ENST00000495888	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.4	■■■□□ 2.78
SPOCK2-208	ENST00000495888	ATP10B	O94823	1461 aa		32.39	■■■□□ 2.78
SPOCK2-208	ENST00000495888	KCNH8	Q96L42	1107 aa		32.38	■■■□□ 2.77
SPOCK2-208	ENST00000495888	TIAM1	Q13009	1591 aa		32.37	■■■□□ 2.77
SPOCK2-208	ENST00000495888	LRRIQ1	Q96JM4	1722 aa		32.36	■■■□□ 2.77
SPOCK2-208	ENST00000495888	CDK13	Q14004	1512 aa	Known RBP	32.3	■■■□□ 2.76
SPOCK2-208	ENST00000495888	ABCA9	Q8IUA7	1624 aa		32.29	■■■□□ 2.76
SPOCK2-208	ENST00000495888	ARID3C	A6NKF2	412 aa		32.26	■■■□□ 2.75
SPOCK2-208	ENST00000495888	ARAP3	Q8WWN8	1544 aa		32.26	■■■□□ 2.75
SPOCK2-208	ENST00000495888	LRRC9	Q6ZRR7	1453 aa		32.23	■■■□□ 2.75
SPOCK2-208	ENST00000495888	KANK4	Q5T7N3	995 aa	Predicted RBP	32.2	■■■□□ 2.75
SPOCK2-208	ENST00000495888	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.2	■■■□□ 2.75
SPOCK2-208	ENST00000495888	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.15	■■■□□ 2.74
SPOCK2-208	ENST00000495888	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.15	■■■□□ 2.74
SPOCK2-208	ENST00000495888	MTUS2	Q5JR59	1369 aa		32.15	■■■□□ 2.74
SPOCK2-208	ENST00000495888	PHLDB1	Q86UU1	1377 aa		32.15	■■■□□ 2.74
SPOCK2-208	ENST00000495888	EHBP1L1	Q8N3D4	1523 aa		32.15	■■■□□ 2.74
SPOCK2-208	ENST00000495888	TRO	Q12816	1431 aa	Predicted RBP	32.12	■■■□□ 2.73
SPOCK2-208	ENST00000495888	NEO1	Q92859	1461 aa		32.1	■■■□□ 2.73
SPOCK2-208	ENST00000495888	PLEKHD1	A6NEE1	506 aa		32.1	■■■□□ 2.73
SPOCK2-208	ENST00000495888	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.07	■■■□□ 2.72
SPOCK2-208	ENST00000495888	HECW2	Q9P2P5	1572 aa		32.07	■■■□□ 2.72
SPOCK2-208	ENST00000495888	FRMPD1	Q5SYB0	1578 aa		32.02	■■■□□ 2.72
SPOCK2-208	ENST00000495888	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.98	■■■□□ 2.71
SPOCK2-208	ENST00000495888	RAPGEF3	O95398	923 aa		31.96	■■■□□ 2.71
SPOCK2-208	ENST00000495888	NCOA2	Q15596	1464 aa		31.96	■■■□□ 2.71
SPOCK2-208	ENST00000495888	KIF14	Q15058	1648 aa		31.93	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms